Gene annotation
Transcriptome id Sobic.005G149300.1,Sobic.005G149300.2
Synonym Sb05g021360
Functional annotation MMP37-like protein, mitochondrial precursor, putative, expressed
UniProt A0A1Z5RJA3 , C5Y498
Pfam PF09139
Panther DB PTHR13619 PTHR13619:SF0
NCBI CDD KOG2986; Uncharacterized conserved protein
KEGG Orthology K17807; TAM41, mitochondrial translocator assembly and maintenance protein 41
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47630 : -
RAP-DB (Rice) LOC_Os11g34840.1 : MMP37-like protein, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a034091
Brachypodium KQJ88239 , PNT63481 , KQJ88240
Barley HORVU1Hr1G091710.9 , HORVU1Hr1G091710.8 , HORVU1Hr1G091710.30 , HORVU1Hr1G091710.1 , HORVU1Hr1G091710.37 , HORVU1Hr1G091710.3 , HORVU1Hr1G091710.2 , HORVU1Hr1G091710.5 , HORVU1Hr1G091710.4 , HORVU1Hr1G091710.7 , HORVU1Hr1G091710.10 , HORVU1Hr1G091710.35 , HORVU1Hr1G091710.34 , HORVU1Hr1G091710.28 , HORVU1Hr1G091710.29 , HORVU1Hr1G091710.20 , HORVU1Hr1G091710.21 , HORVU1Hr1G091710.22 , HORVU1Hr1G091710.23 , HORVU1Hr1G091710.24 , HORVU1Hr1G091710.25 , HORVU1Hr1G091710.26 , HORVU1Hr1G091710.27 , HORVU1Hr1G091710.6 , HORVU1Hr1G091710.19 , HORVU1Hr1G091710.18 , HORVU1Hr1G091710.33 , HORVU1Hr1G091710.32 , HORVU1Hr1G091710.31 , HORVU1Hr1G091710.16 , HORVU1Hr1G091710.11 , HORVU1Hr1G091710.36 , HORVU1Hr1G091710.13 , HORVU1Hr1G091710.12 , HORVU1Hr1G091710.15 , HORVU1Hr1G091710.14 , HORVU1Hr1G091710.17
Wheat TraesCS1D02G428000 , TraesCS1A02G420200 , TraesCS1B02G450600
Populus -


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cDNA sequences
Sobic.005G149300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G221350 - -
2 Sobic.007G150500 expressed protein -
3 Sobic.005G110466 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.002G370800 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
5 Sobic.009G112000 OsFBO5 - F-box and other domain containing protein, expressed -
6 Sobic.001G261250 - -
7 Sobic.007G010100 expressed protein -
8 Sobic.007G052201 - K10666: E3 ubiquitin-protein ligase RNF5
9 Sobic.009G118500 zinc finger protein, putative, expressed -
10 Sobic.009G115950 - -
11 Sobic.008G147000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.49 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.005G113533 - -
13 Sobic.002G357950 - -
14 Sobic.003G379450 - -
15 Sobic.009G011300 SCARECROW, putative, expressed -
16 Sobic.002G118500 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
17 Sobic.006G003800 no apical meristem protein, putative, expressed -
18 Sobic.004G054600 porphobilinogen deaminase, chloroplast precursor, putative, expressed -
19 Sobic.003G186600 OsFBX13 - F-box domain containing protein, expressed -
20 Sobic.010G118200 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic005G149300 Sobic005G149300 Sobic001G221350 Sobic001G221350 Sobic005G149300--Sobic001G221350 Sobic007G150500 Sobic007G150500 Sobic005G149300--Sobic007G150500 Sobic005G110466 Sobic005G110466 Sobic005G149300--Sobic005G110466 Sobic002G370800 Sobic002G370800 Sobic005G149300--Sobic002G370800 Sobic009G112000 Sobic009G112000 Sobic005G149300--Sobic009G112000 Sobic001G261250 Sobic001G261250 Sobic005G149300--Sobic001G261250 Sobic007G010100 Sobic007G010100 Sobic005G149300--Sobic007G010100 Sobic007G052201 Sobic007G052201 Sobic005G149300--Sobic007G052201 Sobic009G118500 Sobic009G118500 Sobic005G149300--Sobic009G118500 Sobic001G221350--Sobic009G112000 Sobic001G221350--Sobic005G110466 Sobic001G221350--Sobic007G150500 Sobic001G221350--Sobic005G149300 Sobic002G357950 Sobic002G357950 Sobic001G221350--Sobic002G357950 Sobic003G355700 Sobic003G355700 Sobic001G221350--Sobic003G355700 Sobic002G139900 Sobic002G139900 Sobic001G221350--Sobic002G139900 Sobic005G100400 Sobic005G100400 Sobic001G221350--Sobic005G100400 Sobic010G133225 Sobic010G133225 Sobic001G221350--Sobic010G133225 Sobic007G150500--Sobic002G357950 Sobic009G115950 Sobic009G115950 Sobic007G150500--Sobic009G115950 Sobic006G003800 Sobic006G003800 Sobic007G150500--Sobic006G003800 Sobic005G211801 Sobic005G211801 Sobic007G150500--Sobic005G211801 Sobic005G198400 Sobic005G198400 Sobic007G150500--Sobic005G198400 Sobic007G150500--Sobic005G110466 Sobic005G150300 Sobic005G150300 Sobic007G150500--Sobic005G150300 Sobic007G150500--Sobic001G221350 Sobic003G325800 Sobic003G325800 Sobic007G150500--Sobic003G325800 Sobic005G110466--Sobic002G357950 Sobic004G256400 Sobic004G256400 Sobic005G110466--Sobic004G256400 Sobic010G200200 Sobic010G200200 Sobic005G110466--Sobic010G200200 Sobic004G142000 Sobic004G142000 Sobic005G110466--Sobic004G142000 Sobic001G259250 Sobic001G259250 Sobic005G110466--Sobic001G259250 Sobic005G153200 Sobic005G153200 Sobic005G110466--Sobic005G153200 Sobic002G338600 Sobic002G338600 Sobic005G110466--Sobic002G338600 Sobic007G205100 Sobic007G205100 Sobic005G110466--Sobic007G205100 Sobic002G028100 Sobic002G028100 Sobic005G110466--Sobic002G028100 Sobic001G425900 Sobic001G425900 Sobic002G370800--Sobic001G425900 Sobic001G485200 Sobic001G485200 Sobic002G370800--Sobic001G485200 Sobic010G118200 Sobic010G118200 Sobic002G370800--Sobic010G118200 Sobic004G339900 Sobic004G339900 Sobic002G370800--Sobic004G339900 Sobic004G071050 Sobic004G071050 Sobic002G370800--Sobic004G071050 Sobic007G041200 Sobic007G041200 Sobic002G370800--Sobic007G041200 Sobic001G083900 Sobic001G083900 Sobic002G370800--Sobic001G083900 Sobic002G104300 Sobic002G104300 Sobic002G370800--Sobic002G104300 Sobic009G033500 Sobic009G033500 Sobic002G370800--Sobic009G033500 Sobic009G112000--Sobic001G221350 Sobic009G112000--Sobic010G133225 Sobic003G255850 Sobic003G255850 Sobic009G112000--Sobic003G255850 Sobic003G172450 Sobic003G172450 Sobic009G112000--Sobic003G172450 Sobic010G107901 Sobic010G107901 Sobic009G112000--Sobic010G107901 Sobic004G234766 Sobic004G234766 Sobic009G112000--Sobic004G234766 Sobic002G397700 Sobic002G397700 Sobic009G112000--Sobic002G397700 Sobic008G024900 Sobic008G024900 Sobic009G112000--Sobic008G024900 Sobic009G112000--Sobic007G010100 Sobic002G099866 Sobic002G099866 Sobic001G261250--Sobic002G099866 Sobic002G266600 Sobic002G266600 Sobic001G261250--Sobic002G266600 Sobic001G261529 Sobic001G261529 Sobic001G261250--Sobic001G261529 Sobic001G264600 Sobic001G264600 Sobic001G261250--Sobic001G264600 Sobic001G509100 Sobic001G509100 Sobic001G261250--Sobic001G509100 Sobic004G322901 Sobic004G322901 Sobic001G261250--Sobic004G322901 Sobic007G086701 Sobic007G086701 Sobic001G261250--Sobic007G086701 Sobic003G092600 Sobic003G092600 Sobic001G261250--Sobic003G092600 Sobic005G083280 Sobic005G083280 Sobic001G261250--Sobic005G083280 Sobic009G192200 Sobic009G192200 Sobic007G010100--Sobic009G192200 Sobic001G175400 Sobic001G175400 Sobic007G010100--Sobic001G175400 Sobic003G401300 Sobic003G401300 Sobic007G010100--Sobic003G401300 Sobic005G028500 Sobic005G028500 Sobic007G010100--Sobic005G028500 Sobic007G085900 Sobic007G085900 Sobic007G010100--Sobic007G085900 Sobic003G379450 Sobic003G379450 Sobic007G010100--Sobic003G379450 Sobic004G282933 Sobic004G282933 Sobic007G010100--Sobic004G282933 Sobic004G104200 Sobic004G104200 Sobic007G010100--Sobic004G104200 Sobic001G128000 Sobic001G128000 Sobic007G010100--Sobic001G128000 Sobic007G052201--Sobic003G379450 Sobic007G046800 Sobic007G046800 Sobic007G052201--Sobic007G046800 Sobic003G139600 Sobic003G139600 Sobic007G052201--Sobic003G139600 Sobic003G416200 Sobic003G416200 Sobic007G052201--Sobic003G416200 Sobic004G282966 Sobic004G282966 Sobic007G052201--Sobic004G282966 Sobic004G207800 Sobic004G207800 Sobic007G052201--Sobic004G207800 Sobic002G087700 Sobic002G087700 Sobic007G052201--Sobic002G087700 Sobic002G380550 Sobic002G380550 Sobic007G052201--Sobic002G380550 Sobic003G267200 Sobic003G267200 Sobic007G052201--Sobic003G267200 Sobic004G312400 Sobic004G312400 Sobic009G118500--Sobic004G312400 Sobic003G107000 Sobic003G107000 Sobic009G118500--Sobic003G107000 Sobic001G315600 Sobic001G315600 Sobic009G118500--Sobic001G315600 Sobic003G032301 Sobic003G032301 Sobic009G118500--Sobic003G032301 Sobic002G317900 Sobic002G317900 Sobic009G118500--Sobic002G317900 Sobic001G061400 Sobic001G061400 Sobic009G118500--Sobic001G061400 Sobic001G221601 Sobic001G221601 Sobic009G118500--Sobic001G221601 Sobic010G160500 Sobic010G160500 Sobic009G118500--Sobic010G160500 Sobic002G054100 Sobic002G054100 Sobic009G118500--Sobic002G054100
Octagon: transcription factors


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