Gene annotation
Transcriptome id Sobic.003G186600.1
Synonym Sb03g025170
Functional annotation OsFBX13 - F-box domain containing protein, expressed
UniProt C5XN12
Pfam PF13474
Panther DB PTHR15537:SF4 PTHR15537
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10925 : Nuclear transport factor 2 (NTF2) family protein
RAP-DB (Rice) LOC_Os01g36940.1 : OsFBX13 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028796 , Zm00025a038327
Brachypodium KQK08274 , KQJ84786
Barley HORVU3Hr1G047440.7 , HORVU3Hr1G047440.1 , HORVU3Hr1G047440.2
Wheat TraesCS3D02G204100 , TraesCS3D02G204100 , TraesCS3A02G199900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G306500 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
2 Sobic.007G072600 OsFBX274 - F-box domain containing protein, expressed -
3 Sobic.001G043700 expressed protein -
4 Sobic.009G236600 expressed protein -
5 Sobic.008G147000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.49 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
6 Sobic.005G033700 heavy-metal-associated domain-containing protein, putative, expressed -
7 Sobic.001G201601 - -
8 Sobic.005G030600 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
9 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
10 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase
11 Sobic.002G122000 - -
12 Sobic.005G149300 MMP37-like protein, mitochondrial precursor, putative, expressed K17807: TAM41, mitochondrial translocator assembly and maintenance protein 41
13 Sobic.004G038900 expressed protein -
14 Sobic.003G029900 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
15 Sobic.004G028700 polygalacturonase, putative, expressed -
16 Sobic.004G218000 SET domain containing protein, expressed -
17 Sobic.006G217500 B3 DNA binding domain containing protein, expressed -
18 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
19 Sobic.008G056200 OsFBX238 - F-box domain containing protein, expressed -
20 Sobic.010G193700 expressed protein -


Gene co-expression network
sample Sobic003G186600 Sobic003G186600 Sobic002G306500 Sobic002G306500 Sobic003G186600--Sobic002G306500 Sobic007G072600 Sobic007G072600 Sobic003G186600--Sobic007G072600 Sobic001G043700 Sobic001G043700 Sobic003G186600--Sobic001G043700 Sobic009G236600 Sobic009G236600 Sobic003G186600--Sobic009G236600 Sobic008G147000 Sobic008G147000 Sobic003G186600--Sobic008G147000 Sobic005G033700 Sobic005G033700 Sobic003G186600--Sobic005G033700 Sobic001G201601 Sobic001G201601 Sobic003G186600--Sobic001G201601 Sobic005G030600 Sobic005G030600 Sobic003G186600--Sobic005G030600 Sobic010G180200 Sobic010G180200 Sobic003G186600--Sobic010G180200 Sobic003G107000 Sobic003G107000 Sobic002G306500--Sobic003G107000 Sobic003G156700 Sobic003G156700 Sobic002G306500--Sobic003G156700 Sobic001G365266 Sobic001G365266 Sobic002G306500--Sobic001G365266 Sobic002G306500--Sobic005G030600 Sobic002G180100 Sobic002G180100 Sobic002G306500--Sobic002G180100 Sobic004G053100 Sobic004G053100 Sobic002G306500--Sobic004G053100 Sobic001G032550 Sobic001G032550 Sobic002G306500--Sobic001G032550 Sobic002G306500--Sobic003G186600 Sobic009G166650 Sobic009G166650 Sobic002G306500--Sobic009G166650 Sobic007G086701 Sobic007G086701 Sobic007G072600--Sobic007G086701 Sobic002G354800 Sobic002G354800 Sobic007G072600--Sobic002G354800 Sobic004G322901 Sobic004G322901 Sobic007G072600--Sobic004G322901 Sobic001G261529 Sobic001G261529 Sobic007G072600--Sobic001G261529 Sobic010G207900 Sobic010G207900 Sobic007G072600--Sobic010G207900 Sobic001G261250 Sobic001G261250 Sobic007G072600--Sobic001G261250 Sobic001G264600 Sobic001G264600 Sobic007G072600--Sobic001G264600 Sobic005G083280 Sobic005G083280 Sobic007G072600--Sobic005G083280 Sobic006G018751 Sobic006G018751 Sobic007G072600--Sobic006G018751 Sobic002G253900 Sobic002G253900 Sobic001G043700--Sobic002G253900 Sobic004G014100 Sobic004G014100 Sobic001G043700--Sobic004G014100 Sobic004G041100 Sobic004G041100 Sobic001G043700--Sobic004G041100 Sobic001G043700--Sobic005G033700 Sobic009G148000 Sobic009G148000 Sobic001G043700--Sobic009G148000 Sobic008G045800 Sobic008G045800 Sobic001G043700--Sobic008G045800 Sobic001G534400 Sobic001G534400 Sobic001G043700--Sobic001G534400 Sobic009G254000 Sobic009G254000 Sobic001G043700--Sobic009G254000 Sobic005G160200 Sobic005G160200 Sobic001G043700--Sobic005G160200 Sobic001G419400 Sobic001G419400 Sobic009G236600--Sobic001G419400 Sobic003G100100 Sobic003G100100 Sobic009G236600--Sobic003G100100 Sobic009G236600--Sobic003G186600 Sobic010G083550 Sobic010G083550 Sobic009G236600--Sobic010G083550 Sobic004G028700 Sobic004G028700 Sobic009G236600--Sobic004G028700 Sobic006G084201 Sobic006G084201 Sobic009G236600--Sobic006G084201 Sobic003G092000 Sobic003G092000 Sobic009G236600--Sobic003G092000 Sobic010G081300 Sobic010G081300 Sobic009G236600--Sobic010G081300 Sobic003G398600 Sobic003G398600 Sobic009G236600--Sobic003G398600 Sobic005G110466 Sobic005G110466 Sobic008G147000--Sobic005G110466 Sobic006G124100 Sobic006G124100 Sobic008G147000--Sobic006G124100 Sobic007G078300 Sobic007G078300 Sobic008G147000--Sobic007G078300 Sobic002G029200 Sobic002G029200 Sobic008G147000--Sobic002G029200 Sobic008G013000 Sobic008G013000 Sobic008G147000--Sobic008G013000 Sobic010G270800 Sobic010G270800 Sobic008G147000--Sobic010G270800 Sobic007G108000 Sobic007G108000 Sobic008G147000--Sobic007G108000 Sobic010G118200 Sobic010G118200 Sobic008G147000--Sobic010G118200 Sobic003G174200 Sobic003G174200 Sobic008G147000--Sobic003G174200 Sobic006G143300 Sobic006G143300 Sobic005G033700--Sobic006G143300 Sobic002G122000 Sobic002G122000 Sobic005G033700--Sobic002G122000 Sobic006G186300 Sobic006G186300 Sobic005G033700--Sobic006G186300 Sobic008G041900 Sobic008G041900 Sobic005G033700--Sobic008G041900 Sobic001G081800 Sobic001G081800 Sobic005G033700--Sobic001G081800 Sobic001G171100 Sobic001G171100 Sobic005G033700--Sobic001G171100 Sobic006G200901 Sobic006G200901 Sobic005G033700--Sobic006G200901 Sobic002G343000 Sobic002G343000 Sobic005G033700--Sobic002G343000 Sobic003G029900 Sobic003G029900 Sobic005G033700--Sobic003G029900 Sobic003G050700 Sobic003G050700 Sobic001G201601--Sobic003G050700 Sobic006G066400 Sobic006G066400 Sobic001G201601--Sobic006G066400 Sobic001G201601--Sobic003G186600 Sobic010G187900 Sobic010G187900 Sobic001G201601--Sobic010G187900 Sobic001G468000 Sobic001G468000 Sobic001G201601--Sobic001G468000 Sobic001G439800 Sobic001G439800 Sobic001G201601--Sobic001G439800 Sobic006G272800 Sobic006G272800 Sobic001G201601--Sobic006G272800 Sobic002G366000 Sobic002G366000 Sobic001G201601--Sobic002G366000 Sobic010G212700 Sobic010G212700 Sobic001G201601--Sobic010G212700 Sobic005G030600--Sobic002G306500 Sobic005G030600--Sobic003G107000 Sobic005G030600--Sobic001G365266 Sobic009G103300 Sobic009G103300 Sobic005G030600--Sobic009G103300 Sobic005G030600--Sobic004G053100 Sobic004G248300 Sobic004G248300 Sobic005G030600--Sobic004G248300 Sobic010G254700 Sobic010G254700 Sobic005G030600--Sobic010G254700 Sobic005G030600--Sobic003G186600 Sobic005G100500 Sobic005G100500 Sobic005G030600--Sobic005G100500 Sobic003G402100 Sobic003G402100 Sobic010G180200--Sobic003G402100 Sobic001G053700 Sobic001G053700 Sobic010G180200--Sobic001G053700 Sobic001G324800 Sobic001G324800 Sobic010G180200--Sobic001G324800 Sobic010G180200--Sobic006G066400 Sobic010G180200--Sobic004G014100 Sobic001G394900 Sobic001G394900 Sobic010G180200--Sobic001G394900 Sobic007G023600 Sobic007G023600 Sobic010G180200--Sobic007G023600 Sobic004G218000 Sobic004G218000 Sobic010G180200--Sobic004G218000 Sobic010G180200--Sobic010G212700
Octagon: transcription factors


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