Gene annotation
Transcriptome id Sobic.001G201601.1
Synonym -
Functional annotation -
UniProt A0A1Z5S6J9
Pfam PF00335
Panther DB PTHR32191 PTHR32191:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G63260 : tetraspanin10
RAP-DB (Rice) LOC_Os10g35980.1 : tetraspanin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006406
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G050700 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
2 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase
3 Sobic.003G186600 OsFBX13 - F-box domain containing protein, expressed -
4 Sobic.010G187900 expressed protein -
5 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -
6 Sobic.001G439800 Subtilisin-like serine protease 2("PubMedID : 26759170,PubMedID : 24597475")@OsSub28 - Putative Subtilisin homologue, expressed -
7 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
8 Sobic.002G366000 X8 domain containing protein, expressed -
9 Sobic.010G212700 tetraspanin family protein, putative, expressed -
10 Sobic.005G018050 - -
11 Sobic.008G041900 expressed protein -
12 Sobic.005G143100 expressed protein -
13 Sobic.002G118500 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
14 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
15 Sobic.001G171100 expressed protein -
16 Sobic.003G382100 PHD finger protein, putative, expressed -
17 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
18 Sobic.004G207000 fasciated ear2, putative, expressed -
19 Sobic.001G038800 SCAR-like protein 1, putative, expressed -
20 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -


Gene co-expression network
sample Sobic001G201601 Sobic001G201601 Sobic003G050700 Sobic003G050700 Sobic001G201601--Sobic003G050700 Sobic006G066400 Sobic006G066400 Sobic001G201601--Sobic006G066400 Sobic003G186600 Sobic003G186600 Sobic001G201601--Sobic003G186600 Sobic010G187900 Sobic010G187900 Sobic001G201601--Sobic010G187900 Sobic001G468000 Sobic001G468000 Sobic001G201601--Sobic001G468000 Sobic001G439800 Sobic001G439800 Sobic001G201601--Sobic001G439800 Sobic006G272800 Sobic006G272800 Sobic001G201601--Sobic006G272800 Sobic002G366000 Sobic002G366000 Sobic001G201601--Sobic002G366000 Sobic010G212700 Sobic010G212700 Sobic001G201601--Sobic010G212700 Sobic005G160200 Sobic005G160200 Sobic003G050700--Sobic005G160200 Sobic003G411700 Sobic003G411700 Sobic003G050700--Sobic003G411700 Sobic007G221700 Sobic007G221700 Sobic003G050700--Sobic007G221700 Sobic010G222800 Sobic010G222800 Sobic003G050700--Sobic010G222800 Sobic007G096800 Sobic007G096800 Sobic003G050700--Sobic007G096800 Sobic004G278900 Sobic004G278900 Sobic003G050700--Sobic004G278900 Sobic003G343200 Sobic003G343200 Sobic003G050700--Sobic003G343200 Sobic006G184200 Sobic006G184200 Sobic003G050700--Sobic006G184200 Sobic003G050700--Sobic010G187900 Sobic006G066400--Sobic001G468000 Sobic003G022900 Sobic003G022900 Sobic006G066400--Sobic003G022900 Sobic006G066400--Sobic010G212700 Sobic010G180200 Sobic010G180200 Sobic006G066400--Sobic010G180200 Sobic001G171100 Sobic001G171100 Sobic006G066400--Sobic001G171100 Sobic002G196500 Sobic002G196500 Sobic006G066400--Sobic002G196500 Sobic006G066400--Sobic002G366000 Sobic002G244600 Sobic002G244600 Sobic006G066400--Sobic002G244600 Sobic006G066400--Sobic006G272800 Sobic002G306500 Sobic002G306500 Sobic003G186600--Sobic002G306500 Sobic007G072600 Sobic007G072600 Sobic003G186600--Sobic007G072600 Sobic001G043700 Sobic001G043700 Sobic003G186600--Sobic001G043700 Sobic009G236600 Sobic009G236600 Sobic003G186600--Sobic009G236600 Sobic008G147000 Sobic008G147000 Sobic003G186600--Sobic008G147000 Sobic005G033700 Sobic005G033700 Sobic003G186600--Sobic005G033700 Sobic003G186600--Sobic001G201601 Sobic005G030600 Sobic005G030600 Sobic003G186600--Sobic005G030600 Sobic003G186600--Sobic010G180200 Sobic004G156200 Sobic004G156200 Sobic010G187900--Sobic004G156200 Sobic005G068800 Sobic005G068800 Sobic010G187900--Sobic005G068800 Sobic001G507000 Sobic001G507000 Sobic010G187900--Sobic001G507000 Sobic004G095200 Sobic004G095200 Sobic010G187900--Sobic004G095200 Sobic009G052100 Sobic009G052100 Sobic010G187900--Sobic009G052100 Sobic003G292700 Sobic003G292700 Sobic010G187900--Sobic003G292700 Sobic010G187900--Sobic007G221700 Sobic009G146250 Sobic009G146250 Sobic010G187900--Sobic009G146250 Sobic009G225500 Sobic009G225500 Sobic010G187900--Sobic009G225500 Sobic001G468000--Sobic006G066400 Sobic001G468000--Sobic010G212700 Sobic001G468000--Sobic006G272800 Sobic001G468000--Sobic002G196500 Sobic002G284100 Sobic002G284100 Sobic001G468000--Sobic002G284100 Sobic001G158300 Sobic001G158300 Sobic001G468000--Sobic001G158300 Sobic001G468000--Sobic010G180200 Sobic002G302600 Sobic002G302600 Sobic001G468000--Sobic002G302600 Sobic001G468000--Sobic001G171100 Sobic008G070700 Sobic008G070700 Sobic001G439800--Sobic008G070700 Sobic001G493900 Sobic001G493900 Sobic001G439800--Sobic001G493900 Sobic006G163300 Sobic006G163300 Sobic001G439800--Sobic006G163300 Sobic003G019900 Sobic003G019900 Sobic001G439800--Sobic003G019900 Sobic007G147200 Sobic007G147200 Sobic001G439800--Sobic007G147200 Sobic001G439800--Sobic006G272800 Sobic005G062600 Sobic005G062600 Sobic001G439800--Sobic005G062600 Sobic004G267600 Sobic004G267600 Sobic001G439800--Sobic004G267600 Sobic001G379900 Sobic001G379900 Sobic001G439800--Sobic001G379900 Sobic006G272800--Sobic002G284100 Sobic002G027600 Sobic002G027600 Sobic006G272800--Sobic002G027600 Sobic006G272800--Sobic004G267600 Sobic006G272800--Sobic008G070700 Sobic005G032600 Sobic005G032600 Sobic006G272800--Sobic005G032600 Sobic006G272800--Sobic001G468000 Sobic002G006100 Sobic002G006100 Sobic006G272800--Sobic002G006100 Sobic006G142500 Sobic006G142500 Sobic006G272800--Sobic006G142500 Sobic006G272800--Sobic001G158300 Sobic007G197100 Sobic007G197100 Sobic002G366000--Sobic007G197100 Sobic002G315500 Sobic002G315500 Sobic002G366000--Sobic002G315500 Sobic009G254000 Sobic009G254000 Sobic002G366000--Sobic009G254000 Sobic001G470200 Sobic001G470200 Sobic002G366000--Sobic001G470200 Sobic002G366000--Sobic006G066400 Sobic001G093000 Sobic001G093000 Sobic002G366000--Sobic001G093000 Sobic002G366000--Sobic005G032600 Sobic002G366000--Sobic001G468000 Sobic001G540700 Sobic001G540700 Sobic002G366000--Sobic001G540700 Sobic010G212700--Sobic001G171100 Sobic010G212700--Sobic001G468000 Sobic010G212700--Sobic003G022900 Sobic010G212700--Sobic006G066400 Sobic010G212700--Sobic010G180200 Sobic010G212700--Sobic002G196500 Sobic004G218000 Sobic004G218000 Sobic010G212700--Sobic004G218000 Sobic002G374200 Sobic002G374200 Sobic010G212700--Sobic002G374200 Sobic004G014100 Sobic004G014100 Sobic010G212700--Sobic004G014100
Octagon: transcription factors


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