Gene annotation
Transcriptome id Sobic.003G050700.1,Sobic.003G050700.2
Synonym DRH1, ATDRH1, Sb03g004420
Functional annotation -
UniProt A0A2U9QI44 , C5XNF0 , A0A1W0VVT0
Pfam PF00397 PF04851 PF00271
Panther DB PTHR24031 PTHR24031:SF274
NCBI CDD -
KEGG Orthology K12823; DDX5, ATP-dependent RNA helicase DDX5/DBP2
Gene Ontology GO:0005515; protein binding GO:0016787hydrolase activity GO:0005524ATP binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G01540 : DEAD box RNA helicase family protein,DEAD box RNA helicase 1
RAP-DB (Rice) LOC_Os01g07740.1,LOC_Os01g07740.3 : DEAD-box ATP-dependent RNA helicase 14, putative, expressed
MaizeGDB (Corn) Zm00025a049007 , Zm00025a049008 , Zm00025a023251 , Zm00025a035724 , Zm00025a054130
Brachypodium PNT70046
Barley HORVU3Hr1G024610.25 , HORVU3Hr1G024610.24 , HORVU3Hr1G024610.27 , HORVU3Hr1G024610.26 , HORVU3Hr1G024610.21 , HORVU3Hr1G024610.20 , HORVU3Hr1G024610.23 , HORVU3Hr1G024610.22 , HORVU3Hr1G024610.29 , HORVU3Hr1G024610.28 , HORVU3Hr1G024610.7 , HORVU3Hr1G024610.4 , HORVU3Hr1G024610.32 , HORVU3Hr1G024610.33 , HORVU3Hr1G024610.30 , HORVU3Hr1G024610.31 , HORVU3Hr1G024610.36 , HORVU3Hr1G024610.37 , HORVU3Hr1G024610.34 , HORVU3Hr1G024610.35 , HORVU3Hr1G024610.19 , HORVU3Hr1G024610.2 , HORVU3Hr1G024610.3 , HORVU3Hr1G024610.1 , HORVU3Hr1G024610.6 , HORVU3Hr1G024610.5 , HORVU3Hr1G024610.8 , HORVU3Hr1G024610.9 , HORVU3Hr1G024610.10 , HORVU3Hr1G024610.11 , HORVU3Hr1G024610.12 , HORVU3Hr1G024610.13 , HORVU3Hr1G024610.14 , HORVU3Hr1G024610.15 , HORVU3Hr1G024610.16 , HORVU3Hr1G024610.17 , HORVU3Hr1G024610.18
Wheat TraesCS3B02G149300 , TraesCS3B02G149300 , TraesCS3B02G149300 , TraesCS3B02G149300 , TraesCS3B02G149300 , TraesCS3B02G149300 , TraesCS3B02G149300 , TraesCS3B02G149300 , TraesCS3B02G149300 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3D02G131100 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200 , TraesCS3A02G130200
Populus -


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cDNA sequences
Sobic.003G050700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
2 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
3 Sobic.007G221700 expressed protein -
4 Sobic.010G222800 expressed protein -
5 Sobic.007G096800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
6 Sobic.004G278900 regulatory protein, putative, expressed -
7 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
8 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
9 Sobic.010G187900 expressed protein -
10 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
11 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
12 Sobic.008G037400 - -
13 Sobic.009G259900 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
14 Sobic.005G040500 OsFBX399 - F-box domain containing protein, expressed -
15 Sobic.004G306100 expressed protein -
16 Sobic.002G123600 expressed protein -
17 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
18 Sobic.001G212600 a_IG002N01.7, putative, expressed -
19 Sobic.002G354800 zinc finger family protein, putative, expressed -
20 Sobic.010G257500 expressed protein -


Gene co-expression network
sample Sobic003G050700 Sobic003G050700 Sobic005G160200 Sobic005G160200 Sobic003G050700--Sobic005G160200 Sobic003G411700 Sobic003G411700 Sobic003G050700--Sobic003G411700 Sobic007G221700 Sobic007G221700 Sobic003G050700--Sobic007G221700 Sobic010G222800 Sobic010G222800 Sobic003G050700--Sobic010G222800 Sobic007G096800 Sobic007G096800 Sobic003G050700--Sobic007G096800 Sobic004G278900 Sobic004G278900 Sobic003G050700--Sobic004G278900 Sobic003G343200 Sobic003G343200 Sobic003G050700--Sobic003G343200 Sobic006G184200 Sobic006G184200 Sobic003G050700--Sobic006G184200 Sobic010G187900 Sobic010G187900 Sobic003G050700--Sobic010G187900 Sobic004G014100 Sobic004G014100 Sobic005G160200--Sobic004G014100 Sobic005G160200--Sobic003G411700 Sobic005G160200--Sobic003G343200 Sobic006G091850 Sobic006G091850 Sobic005G160200--Sobic006G091850 Sobic002G315100 Sobic002G315100 Sobic005G160200--Sobic002G315100 Sobic010G038900 Sobic010G038900 Sobic005G160200--Sobic010G038900 Sobic010G257500 Sobic010G257500 Sobic005G160200--Sobic010G257500 Sobic001G534400 Sobic001G534400 Sobic005G160200--Sobic001G534400 Sobic004G350200 Sobic004G350200 Sobic005G160200--Sobic004G350200 Sobic003G411700--Sobic010G222800 Sobic004G306100 Sobic004G306100 Sobic003G411700--Sobic004G306100 Sobic002G271400 Sobic002G271400 Sobic003G411700--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G411700--Sobic003G343200 Sobic001G212600 Sobic001G212600 Sobic003G411700--Sobic001G212600 Sobic010G024000 Sobic010G024000 Sobic003G411700--Sobic010G024000 Sobic003G411700--Sobic005G160200 Sobic002G204400 Sobic002G204400 Sobic007G221700--Sobic002G204400 Sobic007G221700--Sobic004G306100 Sobic003G393100 Sobic003G393100 Sobic007G221700--Sobic003G393100 Sobic007G221700--Sobic002G271400 Sobic002G021200 Sobic002G021200 Sobic007G221700--Sobic002G021200 Sobic003G315700 Sobic003G315700 Sobic007G221700--Sobic003G315700 Sobic002G173400 Sobic002G173400 Sobic007G221700--Sobic002G173400 Sobic007G221700--Sobic003G411700 Sobic008G148000 Sobic008G148000 Sobic007G221700--Sobic008G148000 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic008G070700 Sobic008G070700 Sobic010G222800--Sobic008G070700 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic004G070100 Sobic004G070100 Sobic007G096800--Sobic004G070100 Sobic003G354500 Sobic003G354500 Sobic007G096800--Sobic003G354500 Sobic010G030000 Sobic010G030000 Sobic007G096800--Sobic010G030000 Sobic002G123600 Sobic002G123600 Sobic007G096800--Sobic002G123600 Sobic010G038200 Sobic010G038200 Sobic007G096800--Sobic010G038200 Sobic001G154300 Sobic001G154300 Sobic007G096800--Sobic001G154300 Sobic007G096800--Sobic003G050700 Sobic007G096800--Sobic007G221700 Sobic008G022500 Sobic008G022500 Sobic007G096800--Sobic008G022500 Sobic003G183466 Sobic003G183466 Sobic004G278900--Sobic003G183466 Sobic010G143600 Sobic010G143600 Sobic004G278900--Sobic010G143600 Sobic010G235700 Sobic010G235700 Sobic004G278900--Sobic010G235700 Sobic003G397100 Sobic003G397100 Sobic004G278900--Sobic003G397100 Sobic003G299500 Sobic003G299500 Sobic004G278900--Sobic003G299500 Sobic001G123600 Sobic001G123600 Sobic004G278900--Sobic001G123600 Sobic004G278900--Sobic006G184200 Sobic006G191200 Sobic006G191200 Sobic004G278900--Sobic006G191200 Sobic007G034200 Sobic007G034200 Sobic004G278900--Sobic007G034200 Sobic003G343200--Sobic010G222800 Sobic003G343200--Sobic010G257500 Sobic003G343200--Sobic002G271400 Sobic003G343200--Sobic001G534400 Sobic003G343200--Sobic003G411700 Sobic003G343200--Sobic004G014100 Sobic003G289700 Sobic003G289700 Sobic003G343200--Sobic003G289700 Sobic003G343200--Sobic004G306100 Sobic003G343200--Sobic010G024000 Sobic008G160600 Sobic008G160600 Sobic006G184200--Sobic008G160600 Sobic006G184200--Sobic010G038900 Sobic002G354800 Sobic002G354800 Sobic006G184200--Sobic002G354800 Sobic008G174500 Sobic008G174500 Sobic006G184200--Sobic008G174500 Sobic003G042200 Sobic003G042200 Sobic006G184200--Sobic003G042200 Sobic002G230400 Sobic002G230400 Sobic006G184200--Sobic002G230400 Sobic008G087200 Sobic008G087200 Sobic006G184200--Sobic008G087200 Sobic010G009600 Sobic010G009600 Sobic006G184200--Sobic010G009600 Sobic003G379900 Sobic003G379900 Sobic006G184200--Sobic003G379900 Sobic004G156200 Sobic004G156200 Sobic010G187900--Sobic004G156200 Sobic005G068800 Sobic005G068800 Sobic010G187900--Sobic005G068800 Sobic001G507000 Sobic001G507000 Sobic010G187900--Sobic001G507000 Sobic004G095200 Sobic004G095200 Sobic010G187900--Sobic004G095200 Sobic009G052100 Sobic009G052100 Sobic010G187900--Sobic009G052100 Sobic003G292700 Sobic003G292700 Sobic010G187900--Sobic003G292700 Sobic010G187900--Sobic007G221700 Sobic009G146250 Sobic009G146250 Sobic010G187900--Sobic009G146250 Sobic009G225500 Sobic009G225500 Sobic010G187900--Sobic009G225500
Octagon: transcription factors


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