Gene annotation
Transcriptome id Sobic.005G197700.1
Synonym Sb05g025480
Functional annotation lysM domain containing protein, putative
UniProt C5Y6Z6
Pfam PF01476
Panther DB PTHR34997
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g57400.1 : lysM domain containing protein, putative
MaizeGDB (Corn) Zm00025a039883
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G088200 expressed protein -
2 Sobic.010G224400 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
3 Sobic.007G043300 monocopper oxidase, putative, expressed -
4 Sobic.003G375300 galactosyltransferase, putative, expressed -
5 Sobic.010G038400 expressed protein -
6 Sobic.009G103201 - -
7 Sobic.002G337600 expressed protein -
8 Sobic.006G274000 ATOFP18/OFP18, putative, expressed -
9 Sobic.003G090700 expressed protein -
10 Sobic.003G347100 - -
11 Sobic.010G050100 expressed protein -
12 Sobic.002G160800 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.005G090100 expressed protein -
14 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.010G275800 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
16 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -
17 Sobic.002G335900 cyclin, putative, expressed K18812: cyclin D6, plant
18 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.005G158400 expressed protein -
20 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -


Gene co-expression network
sample Sobic005G197700 Sobic005G197700 Sobic005G088200 Sobic005G088200 Sobic005G197700--Sobic005G088200 Sobic010G224400 Sobic010G224400 Sobic005G197700--Sobic010G224400 Sobic007G043300 Sobic007G043300 Sobic005G197700--Sobic007G043300 Sobic003G375300 Sobic003G375300 Sobic005G197700--Sobic003G375300 Sobic010G038400 Sobic010G038400 Sobic005G197700--Sobic010G038400 Sobic009G103201 Sobic009G103201 Sobic005G197700--Sobic009G103201 Sobic002G337600 Sobic002G337600 Sobic005G197700--Sobic002G337600 Sobic006G274000 Sobic006G274000 Sobic005G197700--Sobic006G274000 Sobic003G090700 Sobic003G090700 Sobic005G197700--Sobic003G090700 Sobic005G088200--Sobic010G224400 Sobic005G088200--Sobic005G197700 Sobic005G088200--Sobic003G375300 Sobic002G213500 Sobic002G213500 Sobic005G088200--Sobic002G213500 Sobic007G106300 Sobic007G106300 Sobic005G088200--Sobic007G106300 Sobic005G088200--Sobic007G043300 Sobic001G541400 Sobic001G541400 Sobic005G088200--Sobic001G541400 Sobic002G066000 Sobic002G066000 Sobic005G088200--Sobic002G066000 Sobic009G116200 Sobic009G116200 Sobic005G088200--Sobic009G116200 Sobic010G224400--Sobic005G088200 Sobic010G224400--Sobic005G197700 Sobic010G224400--Sobic002G213500 Sobic010G224400--Sobic003G375300 Sobic010G224400--Sobic007G043300 Sobic010G261000 Sobic010G261000 Sobic010G224400--Sobic010G261000 Sobic006G118800 Sobic006G118800 Sobic010G224400--Sobic006G118800 Sobic001G081100 Sobic001G081100 Sobic010G224400--Sobic001G081100 Sobic004G152300 Sobic004G152300 Sobic010G224400--Sobic004G152300 Sobic007G043300--Sobic010G038400 Sobic010G087800 Sobic010G087800 Sobic007G043300--Sobic010G087800 Sobic007G043300--Sobic003G375300 Sobic007G043300--Sobic003G090700 Sobic003G271700 Sobic003G271700 Sobic007G043300--Sobic003G271700 Sobic002G035000 Sobic002G035000 Sobic007G043300--Sobic002G035000 Sobic010G050100 Sobic010G050100 Sobic007G043300--Sobic010G050100 Sobic006G089700 Sobic006G089700 Sobic007G043300--Sobic006G089700 Sobic003G009800 Sobic003G009800 Sobic007G043300--Sobic003G009800 Sobic003G375300--Sobic006G274000 Sobic003G375300--Sobic010G038400 Sobic003G375300--Sobic007G043300 Sobic003G375300--Sobic010G050100 Sobic006G160800 Sobic006G160800 Sobic003G375300--Sobic006G160800 Sobic003G382400 Sobic003G382400 Sobic003G375300--Sobic003G382400 Sobic001G266100 Sobic001G266100 Sobic003G375300--Sobic001G266100 Sobic009G153900 Sobic009G153900 Sobic003G375300--Sobic009G153900 Sobic008G012600 Sobic008G012600 Sobic003G375300--Sobic008G012600 Sobic010G038400--Sobic010G050100 Sobic009G046000 Sobic009G046000 Sobic010G038400--Sobic009G046000 Sobic010G038400--Sobic003G271700 Sobic005G090100 Sobic005G090100 Sobic010G038400--Sobic005G090100 Sobic010G038400--Sobic006G089700 Sobic010G236000 Sobic010G236000 Sobic010G038400--Sobic010G236000 Sobic007G206000 Sobic007G206000 Sobic010G038400--Sobic007G206000 Sobic002G410600 Sobic002G410600 Sobic010G038400--Sobic002G410600 Sobic010G038400--Sobic007G043300 Sobic009G103201--Sobic005G197700 Sobic001G264550 Sobic001G264550 Sobic009G103201--Sobic001G264550 Sobic002G345800 Sobic002G345800 Sobic009G103201--Sobic002G345800 Sobic009G103201--Sobic010G224400 Sobic009G087700 Sobic009G087700 Sobic009G103201--Sobic009G087700 Sobic010G275800 Sobic010G275800 Sobic009G103201--Sobic010G275800 Sobic004G035800 Sobic004G035800 Sobic009G103201--Sobic004G035800 Sobic001G101900 Sobic001G101900 Sobic009G103201--Sobic001G101900 Sobic002G027600 Sobic002G027600 Sobic009G103201--Sobic002G027600 Sobic010G192500 Sobic010G192500 Sobic002G337600--Sobic010G192500 Sobic001G046400 Sobic001G046400 Sobic002G337600--Sobic001G046400 Sobic002G335900 Sobic002G335900 Sobic002G337600--Sobic002G335900 Sobic010G241100 Sobic010G241100 Sobic002G337600--Sobic010G241100 Sobic007G211200 Sobic007G211200 Sobic002G337600--Sobic007G211200 Sobic002G032500 Sobic002G032500 Sobic002G337600--Sobic002G032500 Sobic003G089300 Sobic003G089300 Sobic002G337600--Sobic003G089300 Sobic004G211700 Sobic004G211700 Sobic002G337600--Sobic004G211700 Sobic001G473500 Sobic001G473500 Sobic002G337600--Sobic001G473500 Sobic006G274000--Sobic003G375300 Sobic008G154900 Sobic008G154900 Sobic006G274000--Sobic008G154900 Sobic006G005800 Sobic006G005800 Sobic006G274000--Sobic006G005800 Sobic006G274000--Sobic009G153900 Sobic006G274000--Sobic003G382400 Sobic004G346500 Sobic004G346500 Sobic006G274000--Sobic004G346500 Sobic006G274000--Sobic006G160800 Sobic002G353100 Sobic002G353100 Sobic006G274000--Sobic002G353100 Sobic003G090650 Sobic003G090650 Sobic006G274000--Sobic003G090650 Sobic003G090700--Sobic010G038400 Sobic001G472301 Sobic001G472301 Sobic003G090700--Sobic001G472301 Sobic001G511600 Sobic001G511600 Sobic003G090700--Sobic001G511600 Sobic008G013500 Sobic008G013500 Sobic003G090700--Sobic008G013500 Sobic003G090700--Sobic007G043300 Sobic001G102600 Sobic001G102600 Sobic003G090700--Sobic001G102600 Sobic007G153100 Sobic007G153100 Sobic003G090700--Sobic007G153100 Sobic002G380800 Sobic002G380800 Sobic003G090700--Sobic002G380800 Sobic003G090700--Sobic010G050100
Octagon: transcription factors


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