Gene annotation
Transcriptome id Sobic.005G088200.1
Synonym Sb05g007180
Functional annotation expressed protein
UniProt A0A1B6PR34
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02816 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os12g09620.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G224400 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.005G197700 lysM domain containing protein, putative -
3 Sobic.003G375300 galactosyltransferase, putative, expressed -
4 Sobic.002G213500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR37 - Auxin-responsive SAUR gene family member, expressed -
5 Sobic.007G106300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
6 Sobic.007G043300 monocopper oxidase, putative, expressed -
7 Sobic.001G541400 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G066000 expressed protein -
9 Sobic.009G116200 PHD finger protein, putative, expressed -
10 Sobic.006G274000 ATOFP18/OFP18, putative, expressed -
11 Sobic.006G118800 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.008G041900 expressed protein -
13 Sobic.010G275800 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
14 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -
15 Sobic.002G160800 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.002G149200 embryogenesis transmembrane protein, putative, expressed -
17 Sobic.010G038400 expressed protein -
18 Sobic.003G095500 glycosyltransferase, putative, expressed -
19 Sobic.005G205800 ATXR, putative, expressed -
20 Sobic.010G112700 NHL repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G088200 Sobic005G088200 Sobic010G224400 Sobic010G224400 Sobic005G088200--Sobic010G224400 Sobic005G197700 Sobic005G197700 Sobic005G088200--Sobic005G197700 Sobic003G375300 Sobic003G375300 Sobic005G088200--Sobic003G375300 Sobic002G213500 Sobic002G213500 Sobic005G088200--Sobic002G213500 Sobic007G106300 Sobic007G106300 Sobic005G088200--Sobic007G106300 Sobic007G043300 Sobic007G043300 Sobic005G088200--Sobic007G043300 Sobic001G541400 Sobic001G541400 Sobic005G088200--Sobic001G541400 Sobic002G066000 Sobic002G066000 Sobic005G088200--Sobic002G066000 Sobic009G116200 Sobic009G116200 Sobic005G088200--Sobic009G116200 Sobic010G224400--Sobic005G088200 Sobic010G224400--Sobic005G197700 Sobic010G224400--Sobic002G213500 Sobic010G224400--Sobic003G375300 Sobic010G224400--Sobic007G043300 Sobic010G261000 Sobic010G261000 Sobic010G224400--Sobic010G261000 Sobic006G118800 Sobic006G118800 Sobic010G224400--Sobic006G118800 Sobic001G081100 Sobic001G081100 Sobic010G224400--Sobic001G081100 Sobic004G152300 Sobic004G152300 Sobic010G224400--Sobic004G152300 Sobic005G197700--Sobic005G088200 Sobic005G197700--Sobic010G224400 Sobic005G197700--Sobic007G043300 Sobic005G197700--Sobic003G375300 Sobic010G038400 Sobic010G038400 Sobic005G197700--Sobic010G038400 Sobic009G103201 Sobic009G103201 Sobic005G197700--Sobic009G103201 Sobic002G337600 Sobic002G337600 Sobic005G197700--Sobic002G337600 Sobic006G274000 Sobic006G274000 Sobic005G197700--Sobic006G274000 Sobic003G090700 Sobic003G090700 Sobic005G197700--Sobic003G090700 Sobic003G375300--Sobic006G274000 Sobic003G375300--Sobic010G038400 Sobic003G375300--Sobic007G043300 Sobic010G050100 Sobic010G050100 Sobic003G375300--Sobic010G050100 Sobic006G160800 Sobic006G160800 Sobic003G375300--Sobic006G160800 Sobic003G382400 Sobic003G382400 Sobic003G375300--Sobic003G382400 Sobic001G266100 Sobic001G266100 Sobic003G375300--Sobic001G266100 Sobic009G153900 Sobic009G153900 Sobic003G375300--Sobic009G153900 Sobic008G012600 Sobic008G012600 Sobic003G375300--Sobic008G012600 Sobic002G213500--Sobic001G081100 Sobic002G213500--Sobic010G224400 Sobic002G213500--Sobic010G261000 Sobic002G213500--Sobic001G541400 Sobic002G213500--Sobic005G088200 Sobic002G213500--Sobic007G106300 Sobic004G145300 Sobic004G145300 Sobic002G213500--Sobic004G145300 Sobic002G343000 Sobic002G343000 Sobic002G213500--Sobic002G343000 Sobic001G123100 Sobic001G123100 Sobic002G213500--Sobic001G123100 Sobic003G078400 Sobic003G078400 Sobic007G106300--Sobic003G078400 Sobic008G041900 Sobic008G041900 Sobic007G106300--Sobic008G041900 Sobic003G026900 Sobic003G026900 Sobic007G106300--Sobic003G026900 Sobic006G122300 Sobic006G122300 Sobic007G106300--Sobic006G122300 Sobic007G106300--Sobic001G541400 Sobic005G018050 Sobic005G018050 Sobic007G106300--Sobic005G018050 Sobic007G106300--Sobic004G145300 Sobic001G085200 Sobic001G085200 Sobic007G106300--Sobic001G085200 Sobic003G224700 Sobic003G224700 Sobic007G106300--Sobic003G224700 Sobic007G043300--Sobic010G038400 Sobic010G087800 Sobic010G087800 Sobic007G043300--Sobic010G087800 Sobic007G043300--Sobic003G375300 Sobic007G043300--Sobic003G090700 Sobic003G271700 Sobic003G271700 Sobic007G043300--Sobic003G271700 Sobic002G035000 Sobic002G035000 Sobic007G043300--Sobic002G035000 Sobic007G043300--Sobic010G050100 Sobic006G089700 Sobic006G089700 Sobic007G043300--Sobic006G089700 Sobic003G009800 Sobic003G009800 Sobic007G043300--Sobic003G009800 Sobic002G197800 Sobic002G197800 Sobic001G541400--Sobic002G197800 Sobic002G273000 Sobic002G273000 Sobic001G541400--Sobic002G273000 Sobic010G195450 Sobic010G195450 Sobic001G541400--Sobic010G195450 Sobic010G195301 Sobic010G195301 Sobic001G541400--Sobic010G195301 Sobic001G541400--Sobic001G085200 Sobic009G201100 Sobic009G201100 Sobic001G541400--Sobic009G201100 Sobic005G176875 Sobic005G176875 Sobic001G541400--Sobic005G176875 Sobic001G541400--Sobic002G066000 Sobic004G286301 Sobic004G286301 Sobic001G541400--Sobic004G286301 Sobic005G205800 Sobic005G205800 Sobic002G066000--Sobic005G205800 Sobic005G189000 Sobic005G189000 Sobic002G066000--Sobic005G189000 Sobic004G207500 Sobic004G207500 Sobic002G066000--Sobic004G207500 Sobic005G186250 Sobic005G186250 Sobic002G066000--Sobic005G186250 Sobic005G083220 Sobic005G083220 Sobic002G066000--Sobic005G083220 Sobic009G007100 Sobic009G007100 Sobic002G066000--Sobic009G007100 Sobic007G049000 Sobic007G049000 Sobic002G066000--Sobic007G049000 Sobic006G142850 Sobic006G142850 Sobic002G066000--Sobic006G142850 Sobic008G181250 Sobic008G181250 Sobic002G066000--Sobic008G181250 Sobic005G131800 Sobic005G131800 Sobic009G116200--Sobic005G131800 Sobic004G075700 Sobic004G075700 Sobic009G116200--Sobic004G075700 Sobic001G305100 Sobic001G305100 Sobic009G116200--Sobic001G305100 Sobic010G112700 Sobic010G112700 Sobic009G116200--Sobic010G112700 Sobic006G186300 Sobic006G186300 Sobic009G116200--Sobic006G186300 Sobic009G116200--Sobic003G026900 Sobic009G116200--Sobic008G041900 Sobic002G230400 Sobic002G230400 Sobic009G116200--Sobic002G230400 Sobic009G017000 Sobic009G017000 Sobic009G116200--Sobic009G017000
Octagon: transcription factors


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