Gene annotation
Transcriptome id Sobic.002G149200.1
Synonym Sb02g017490
Functional annotation embryogenesis transmembrane protein, putative, expressed
UniProt A0A1B6QBG4
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11000 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os06g18990.1 : embryogenesis transmembrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a050583 , Zm00025a029258 , Zm00025a050516
Brachypodium KQK18773
Barley HORVU7Hr1G044100.1 , HORVU7Hr1G044100.2 , HORVU7Hr1G044100.3 , HORVU7Hr1G044100.5 , HORVU7Hr1G044100.6 , HORVU7Hr1G044100.7 , HORVU7Hr1G044100.8 , HORVU7Hr1G044100.11 , HORVU2Hr1G006360.3 , HORVU2Hr1G006360.2 , HORVU2Hr1G006360.1
Wheat TraesCS7D02G034500 , TraesCS2A02G041800 , TraesCS7A02G217300 , TraesCS7D02G219200 , TraesCS3B02G595400 , TraesCS6D02G346500 , TraesCS6D02G346500 , TraesCS7D02G219100 , TraesCS6B02G003300 , TraesCS7D02G219000 , TraesCS2A02G041700 , TraesCS2B02G054200 , TraesCS6B02G387600 , TraesCS7B02G124400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G088200 expressed protein -
2 Sobic.005G197700 lysM domain containing protein, putative -
3 Sobic.010G224400 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
4 Sobic.002G160800 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.007G043300 monocopper oxidase, putative, expressed -
6 Sobic.009G116200 PHD finger protein, putative, expressed -
7 Sobic.003G375300 galactosyltransferase, putative, expressed -
8 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -
9 Sobic.004G001800 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
10 Sobic.007G106300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
11 Sobic.003G095500 glycosyltransferase, putative, expressed -
12 Sobic.002G213500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR37 - Auxin-responsive SAUR gene family member, expressed -
13 Sobic.004G093400 beta-galactosidase precursor, putative, expressed -
14 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
15 Sobic.001G444500 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G467800 expressed protein -
17 Sobic.008G176900 expressed protein -
18 Sobic.002G066000 expressed protein -
19 Sobic.010G038400 expressed protein -
20 Sobic.003G374300 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G149200 Sobic002G149200 Sobic005G088200 Sobic005G088200 Sobic002G149200--Sobic005G088200 Sobic005G197700 Sobic005G197700 Sobic002G149200--Sobic005G197700 Sobic010G224400 Sobic010G224400 Sobic002G149200--Sobic010G224400 Sobic002G160800 Sobic002G160800 Sobic002G149200--Sobic002G160800 Sobic007G043300 Sobic007G043300 Sobic002G149200--Sobic007G043300 Sobic009G116200 Sobic009G116200 Sobic002G149200--Sobic009G116200 Sobic003G375300 Sobic003G375300 Sobic002G149200--Sobic003G375300 Sobic003G078400 Sobic003G078400 Sobic002G149200--Sobic003G078400 Sobic004G001800 Sobic004G001800 Sobic002G149200--Sobic004G001800 Sobic005G088200--Sobic010G224400 Sobic005G088200--Sobic005G197700 Sobic005G088200--Sobic003G375300 Sobic002G213500 Sobic002G213500 Sobic005G088200--Sobic002G213500 Sobic007G106300 Sobic007G106300 Sobic005G088200--Sobic007G106300 Sobic005G088200--Sobic007G043300 Sobic001G541400 Sobic001G541400 Sobic005G088200--Sobic001G541400 Sobic002G066000 Sobic002G066000 Sobic005G088200--Sobic002G066000 Sobic005G088200--Sobic009G116200 Sobic005G197700--Sobic005G088200 Sobic005G197700--Sobic010G224400 Sobic005G197700--Sobic007G043300 Sobic005G197700--Sobic003G375300 Sobic010G038400 Sobic010G038400 Sobic005G197700--Sobic010G038400 Sobic009G103201 Sobic009G103201 Sobic005G197700--Sobic009G103201 Sobic002G337600 Sobic002G337600 Sobic005G197700--Sobic002G337600 Sobic006G274000 Sobic006G274000 Sobic005G197700--Sobic006G274000 Sobic003G090700 Sobic003G090700 Sobic005G197700--Sobic003G090700 Sobic010G224400--Sobic005G088200 Sobic010G224400--Sobic005G197700 Sobic010G224400--Sobic002G213500 Sobic010G224400--Sobic003G375300 Sobic010G224400--Sobic007G043300 Sobic010G261000 Sobic010G261000 Sobic010G224400--Sobic010G261000 Sobic006G118800 Sobic006G118800 Sobic010G224400--Sobic006G118800 Sobic001G081100 Sobic001G081100 Sobic010G224400--Sobic001G081100 Sobic004G152300 Sobic004G152300 Sobic010G224400--Sobic004G152300 Sobic004G093400 Sobic004G093400 Sobic002G160800--Sobic004G093400 Sobic003G338200 Sobic003G338200 Sobic002G160800--Sobic003G338200 Sobic001G083500 Sobic001G083500 Sobic002G160800--Sobic001G083500 Sobic002G315500 Sobic002G315500 Sobic002G160800--Sobic002G315500 Sobic002G160800--Sobic002G337600 Sobic002G404300 Sobic002G404300 Sobic002G160800--Sobic002G404300 Sobic002G032500 Sobic002G032500 Sobic002G160800--Sobic002G032500 Sobic002G335900 Sobic002G335900 Sobic002G160800--Sobic002G335900 Sobic009G005700 Sobic009G005700 Sobic002G160800--Sobic009G005700 Sobic007G043300--Sobic010G038400 Sobic010G087800 Sobic010G087800 Sobic007G043300--Sobic010G087800 Sobic007G043300--Sobic003G375300 Sobic007G043300--Sobic003G090700 Sobic003G271700 Sobic003G271700 Sobic007G043300--Sobic003G271700 Sobic002G035000 Sobic002G035000 Sobic007G043300--Sobic002G035000 Sobic010G050100 Sobic010G050100 Sobic007G043300--Sobic010G050100 Sobic006G089700 Sobic006G089700 Sobic007G043300--Sobic006G089700 Sobic003G009800 Sobic003G009800 Sobic007G043300--Sobic003G009800 Sobic005G131800 Sobic005G131800 Sobic009G116200--Sobic005G131800 Sobic004G075700 Sobic004G075700 Sobic009G116200--Sobic004G075700 Sobic001G305100 Sobic001G305100 Sobic009G116200--Sobic001G305100 Sobic010G112700 Sobic010G112700 Sobic009G116200--Sobic010G112700 Sobic006G186300 Sobic006G186300 Sobic009G116200--Sobic006G186300 Sobic003G026900 Sobic003G026900 Sobic009G116200--Sobic003G026900 Sobic008G041900 Sobic008G041900 Sobic009G116200--Sobic008G041900 Sobic002G230400 Sobic002G230400 Sobic009G116200--Sobic002G230400 Sobic009G017000 Sobic009G017000 Sobic009G116200--Sobic009G017000 Sobic003G375300--Sobic006G274000 Sobic003G375300--Sobic010G038400 Sobic003G375300--Sobic007G043300 Sobic003G375300--Sobic010G050100 Sobic006G160800 Sobic006G160800 Sobic003G375300--Sobic006G160800 Sobic003G382400 Sobic003G382400 Sobic003G375300--Sobic003G382400 Sobic001G266100 Sobic001G266100 Sobic003G375300--Sobic001G266100 Sobic009G153900 Sobic009G153900 Sobic003G375300--Sobic009G153900 Sobic008G012600 Sobic008G012600 Sobic003G375300--Sobic008G012600 Sobic001G015700 Sobic001G015700 Sobic003G078400--Sobic001G015700 Sobic006G122300 Sobic006G122300 Sobic003G078400--Sobic006G122300 Sobic001G444500 Sobic001G444500 Sobic003G078400--Sobic001G444500 Sobic009G088700 Sobic009G088700 Sobic003G078400--Sobic009G088700 Sobic003G078400--Sobic007G106300 Sobic002G220700 Sobic002G220700 Sobic003G078400--Sobic002G220700 Sobic009G129700 Sobic009G129700 Sobic003G078400--Sobic009G129700 Sobic003G078400--Sobic001G083500 Sobic003G100700 Sobic003G100700 Sobic003G078400--Sobic003G100700 Sobic001G197600 Sobic001G197600 Sobic004G001800--Sobic001G197600 Sobic003G419700 Sobic003G419700 Sobic004G001800--Sobic003G419700 Sobic008G154700 Sobic008G154700 Sobic004G001800--Sobic008G154700 Sobic004G001800--Sobic003G338200 Sobic006G219100 Sobic006G219100 Sobic004G001800--Sobic006G219100 Sobic007G094200 Sobic007G094200 Sobic004G001800--Sobic007G094200 Sobic004G248100 Sobic004G248100 Sobic004G001800--Sobic004G248100 Sobic004G001800--Sobic002G032500 Sobic004G001800--Sobic010G087800
Octagon: transcription factors


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