Gene annotation
Transcriptome id Sobic.003G374300.1
Synonym Sb03g041470
Functional annotation DNA binding protein, putative, expressed
UniProt C5XRC5
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G10280 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os01g65490.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a026612 , Zm00025a008016 , Zm00025a008015
Brachypodium KQK11901 , KQK10852
Barley HORVU3Hr1G081930.4 , HORVU3Hr1G081930.5 , HORVU3Hr1G081930.2 , HORVU3Hr1G081930.3 , HORVU3Hr1G081930.1 , HORVU4Hr1G010270.4 , HORVU4Hr1G010270.5 , HORVU4Hr1G010270.6 , HORVU4Hr1G010270.7 , HORVU4Hr1G010270.1 , HORVU4Hr1G010270.2 , HORVU4Hr1G010270.3
Wheat TraesCS5D02G015600 , TraesCS3B02G478200 , TraesCS5B02G008600 , TraesCS5B02G008600 , TraesCS3B02G418600 , TraesCS4D02G061000 , TraesCS3A02G386500 , TraesCS3D02G379500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G160800 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G305300 ATROPGEF7/ROPGEF7, putative, expressed -
3 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
4 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
5 Sobic.006G015900 thaumatin, putative, expressed -
6 Sobic.002G016400 monocopper oxidase, putative, expressed -
7 Sobic.005G098400 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.001G310200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
10 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
11 Sobic.002G183800 L-ascorbate oxidase precursor, putative, expressed -
12 Sobic.004G093400 beta-galactosidase precursor, putative, expressed -
13 Sobic.003G418300 protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
14 Sobic.010G216600 expressed protein -
15 Sobic.002G404300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
16 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
17 Sobic.006G219100 expressed protein -
18 Sobic.003G300400 expressed protein -
19 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
20 Sobic.007G094200 expressed protein -


Gene co-expression network
sample Sobic003G374300 Sobic003G374300 Sobic002G160800 Sobic002G160800 Sobic003G374300--Sobic002G160800 Sobic001G305300 Sobic001G305300 Sobic003G374300--Sobic001G305300 Sobic007G225400 Sobic007G225400 Sobic003G374300--Sobic007G225400 Sobic001G345200 Sobic001G345200 Sobic003G374300--Sobic001G345200 Sobic006G015900 Sobic006G015900 Sobic003G374300--Sobic006G015900 Sobic002G016400 Sobic002G016400 Sobic003G374300--Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic003G374300--Sobic005G098400 Sobic001G310200 Sobic001G310200 Sobic003G374300--Sobic001G310200 Sobic003G338200 Sobic003G338200 Sobic003G374300--Sobic003G338200 Sobic004G093400 Sobic004G093400 Sobic002G160800--Sobic004G093400 Sobic002G160800--Sobic003G338200 Sobic001G083500 Sobic001G083500 Sobic002G160800--Sobic001G083500 Sobic002G315500 Sobic002G315500 Sobic002G160800--Sobic002G315500 Sobic002G337600 Sobic002G337600 Sobic002G160800--Sobic002G337600 Sobic002G404300 Sobic002G404300 Sobic002G160800--Sobic002G404300 Sobic002G032500 Sobic002G032500 Sobic002G160800--Sobic002G032500 Sobic002G335900 Sobic002G335900 Sobic002G160800--Sobic002G335900 Sobic009G005700 Sobic009G005700 Sobic002G160800--Sobic009G005700 Sobic001G305300--Sobic005G098400 Sobic001G305300--Sobic002G016400 Sobic007G120301 Sobic007G120301 Sobic001G305300--Sobic007G120301 Sobic001G305300--Sobic001G345200 Sobic005G121700 Sobic005G121700 Sobic001G305300--Sobic005G121700 Sobic007G050500 Sobic007G050500 Sobic001G305300--Sobic007G050500 Sobic005G010300 Sobic005G010300 Sobic001G305300--Sobic005G010300 Sobic001G305300--Sobic007G225400 Sobic001G305300--Sobic001G310200 Sobic004G170900 Sobic004G170900 Sobic007G225400--Sobic004G170900 Sobic007G225400--Sobic005G098400 Sobic010G216600 Sobic010G216600 Sobic007G225400--Sobic010G216600 Sobic005G047100 Sobic005G047100 Sobic007G225400--Sobic005G047100 Sobic002G226500 Sobic002G226500 Sobic007G225400--Sobic002G226500 Sobic007G225400--Sobic005G121700 Sobic007G225400--Sobic002G016400 Sobic007G225400--Sobic001G305300 Sobic001G264400 Sobic001G264400 Sobic007G225400--Sobic001G264400 Sobic001G345200--Sobic005G098400 Sobic001G345200--Sobic003G338200 Sobic001G345200--Sobic002G016400 Sobic001G267100 Sobic001G267100 Sobic001G345200--Sobic001G267100 Sobic003G116100 Sobic003G116100 Sobic001G345200--Sobic003G116100 Sobic005G091000 Sobic005G091000 Sobic001G345200--Sobic005G091000 Sobic001G345200--Sobic001G305300 Sobic008G187400 Sobic008G187400 Sobic001G345200--Sobic008G187400 Sobic003G277200 Sobic003G277200 Sobic001G345200--Sobic003G277200 Sobic006G219100 Sobic006G219100 Sobic006G015900--Sobic006G219100 Sobic004G227900 Sobic004G227900 Sobic006G015900--Sobic004G227900 Sobic004G215000 Sobic004G215000 Sobic006G015900--Sobic004G215000 Sobic010G027700 Sobic010G027700 Sobic006G015900--Sobic010G027700 Sobic007G094200 Sobic007G094200 Sobic006G015900--Sobic007G094200 Sobic004G045500 Sobic004G045500 Sobic006G015900--Sobic004G045500 Sobic008G004200 Sobic008G004200 Sobic006G015900--Sobic008G004200 Sobic004G342000 Sobic004G342000 Sobic006G015900--Sobic004G342000 Sobic001G179400 Sobic001G179400 Sobic006G015900--Sobic001G179400 Sobic002G016400--Sobic005G098400 Sobic003G418300 Sobic003G418300 Sobic002G016400--Sobic003G418300 Sobic002G016400--Sobic007G050500 Sobic002G016400--Sobic001G305300 Sobic002G016400--Sobic001G345200 Sobic007G208100 Sobic007G208100 Sobic002G016400--Sobic007G208100 Sobic006G149300 Sobic006G149300 Sobic002G016400--Sobic006G149300 Sobic001G382700 Sobic001G382700 Sobic002G016400--Sobic001G382700 Sobic008G170400 Sobic008G170400 Sobic002G016400--Sobic008G170400 Sobic005G098400--Sobic002G016400 Sobic005G098400--Sobic001G305300 Sobic005G098400--Sobic001G345200 Sobic005G098400--Sobic003G418300 Sobic005G098400--Sobic007G050500 Sobic005G098400--Sobic007G225400 Sobic005G098400--Sobic005G091000 Sobic005G098400--Sobic005G121700 Sobic005G098400--Sobic008G170400 Sobic001G110100 Sobic001G110100 Sobic001G310200--Sobic001G110100 Sobic002G129100 Sobic002G129100 Sobic001G310200--Sobic002G129100 Sobic004G118100 Sobic004G118100 Sobic001G310200--Sobic004G118100 Sobic010G062200 Sobic010G062200 Sobic001G310200--Sobic010G062200 Sobic001G310200--Sobic004G227900 Sobic001G310200--Sobic008G004200 Sobic010G053300 Sobic010G053300 Sobic001G310200--Sobic010G053300 Sobic005G054800 Sobic005G054800 Sobic001G310200--Sobic005G054800 Sobic006G137000 Sobic006G137000 Sobic001G310200--Sobic006G137000 Sobic003G338200--Sobic002G032500 Sobic002G419200 Sobic002G419200 Sobic003G338200--Sobic002G419200 Sobic003G309400 Sobic003G309400 Sobic003G338200--Sobic003G309400 Sobic004G248100 Sobic004G248100 Sobic003G338200--Sobic004G248100 Sobic003G338200--Sobic001G345200 Sobic003G338200--Sobic003G116100 Sobic003G338200--Sobic007G094200 Sobic003G338200--Sobic003G277200 Sobic003G300400 Sobic003G300400 Sobic003G338200--Sobic003G300400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.