Gene annotation
Transcriptome id Sobic.006G015900.1
Synonym Sb06g001550
Functional annotation thaumatin, putative, expressed
UniProt A0A1Z5RBM0
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75800 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os10g05660.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a055426 , Zm00025a005688 , Zm00025a012308 , Zm00025a034213
Brachypodium PNT62219 , PNT62218 , PNT62217 , PNT62216 , KQJ85471 , KQJ81409
Barley HORVU7Hr1G057350.4 , HORVU7Hr1G057350.1 , HORVU7Hr1G057350.3 , HORVU7Hr1G057350.2 , HORVU1Hr1G005760.1
Wheat TraesCS7D02G517200 , TraesCS7D02G272100 , TraesCS7A02G529500 , TraesCS7B02G170200 , TraesCS7B02G446200 , TraesCS7B02G446200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G219100 expressed protein -
2 Sobic.004G227900 expansin precursor, putative, expressed -
3 Sobic.004G215000 uncharacterized protein At4g06744 precursor, putative, expressed -
4 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
5 Sobic.007G094200 expressed protein -
6 Sobic.004G045500 phytosulfokine receptor precursor, putative, expressed -
7 Sobic.008G004200 MYB family transcription factor, putative, expressed -
8 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
9 Sobic.001G179400 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
10 Sobic.005G201900 OsFBX230 - F-box domain containing protein, expressed -
11 Sobic.002G068400 - -
12 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
13 Sobic.003G120600 transmembrane protein 136, putative, expressed -
14 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.010G053300 expressed protein -
16 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
17 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
18 Sobic.005G118700 expressed protein -
19 Sobic.007G125400 lysM domain containing protein, putative -
20 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic006G015900 Sobic006G015900 Sobic006G219100 Sobic006G219100 Sobic006G015900--Sobic006G219100 Sobic004G227900 Sobic004G227900 Sobic006G015900--Sobic004G227900 Sobic004G215000 Sobic004G215000 Sobic006G015900--Sobic004G215000 Sobic010G027700 Sobic010G027700 Sobic006G015900--Sobic010G027700 Sobic007G094200 Sobic007G094200 Sobic006G015900--Sobic007G094200 Sobic004G045500 Sobic004G045500 Sobic006G015900--Sobic004G045500 Sobic008G004200 Sobic008G004200 Sobic006G015900--Sobic008G004200 Sobic004G342000 Sobic004G342000 Sobic006G015900--Sobic004G342000 Sobic001G179400 Sobic001G179400 Sobic006G015900--Sobic001G179400 Sobic006G219100--Sobic007G094200 Sobic006G219100--Sobic004G215000 Sobic006G219100--Sobic001G179400 Sobic006G219100--Sobic004G227900 Sobic008G154700 Sobic008G154700 Sobic006G219100--Sobic008G154700 Sobic003G116100 Sobic003G116100 Sobic006G219100--Sobic003G116100 Sobic006G219100--Sobic010G027700 Sobic002G068400 Sobic002G068400 Sobic006G219100--Sobic002G068400 Sobic006G219100--Sobic004G342000 Sobic004G227900--Sobic008G004200 Sobic001G334501 Sobic001G334501 Sobic004G227900--Sobic001G334501 Sobic010G053300 Sobic010G053300 Sobic004G227900--Sobic010G053300 Sobic005G089700 Sobic005G089700 Sobic004G227900--Sobic005G089700 Sobic007G000600 Sobic007G000600 Sobic004G227900--Sobic007G000600 Sobic001G366000 Sobic001G366000 Sobic004G227900--Sobic001G366000 Sobic005G200700 Sobic005G200700 Sobic004G227900--Sobic005G200700 Sobic003G016000 Sobic003G016000 Sobic004G227900--Sobic003G016000 Sobic008G032400 Sobic008G032400 Sobic004G227900--Sobic008G032400 Sobic001G438500 Sobic001G438500 Sobic004G215000--Sobic001G438500 Sobic004G215000--Sobic010G027700 Sobic004G215000--Sobic004G227900 Sobic004G215000--Sobic001G179400 Sobic004G215000--Sobic002G068400 Sobic005G201900 Sobic005G201900 Sobic004G215000--Sobic005G201900 Sobic010G065700 Sobic010G065700 Sobic004G215000--Sobic010G065700 Sobic003G120600 Sobic003G120600 Sobic004G215000--Sobic003G120600 Sobic004G215000--Sobic008G004200 Sobic010G027700--Sobic002G068400 Sobic010G027700--Sobic004G215000 Sobic010G027700--Sobic001G438500 Sobic007G125400 Sobic007G125400 Sobic010G027700--Sobic007G125400 Sobic010G027700--Sobic003G120600 Sobic010G027700--Sobic001G179400 Sobic010G027700--Sobic007G094200 Sobic002G023700 Sobic002G023700 Sobic010G027700--Sobic002G023700 Sobic009G037300 Sobic009G037300 Sobic010G027700--Sobic009G037300 Sobic002G032500 Sobic002G032500 Sobic007G094200--Sobic002G032500 Sobic002G416400 Sobic002G416400 Sobic007G094200--Sobic002G416400 Sobic007G094200--Sobic008G154700 Sobic003G178500 Sobic003G178500 Sobic007G094200--Sobic003G178500 Sobic007G094200--Sobic004G342000 Sobic007G094200--Sobic010G027700 Sobic007G094200--Sobic001G438500 Sobic007G094200--Sobic004G227900 Sobic007G094200--Sobic006G219100 Sobic004G045500--Sobic004G342000 Sobic004G045500--Sobic010G027700 Sobic004G045500--Sobic001G179400 Sobic004G045500--Sobic002G068400 Sobic005G118700 Sobic005G118700 Sobic004G045500--Sobic005G118700 Sobic004G045500--Sobic003G120600 Sobic005G218000 Sobic005G218000 Sobic004G045500--Sobic005G218000 Sobic002G312200 Sobic002G312200 Sobic004G045500--Sobic002G312200 Sobic005G055400 Sobic005G055400 Sobic004G045500--Sobic005G055400 Sobic008G004200--Sobic001G334501 Sobic008G004200--Sobic004G227900 Sobic008G004200--Sobic005G200700 Sobic001G491400 Sobic001G491400 Sobic008G004200--Sobic001G491400 Sobic010G049600 Sobic010G049600 Sobic008G004200--Sobic010G049600 Sobic010G215700 Sobic010G215700 Sobic008G004200--Sobic010G215700 Sobic008G004200--Sobic001G366000 Sobic002G399600 Sobic002G399600 Sobic008G004200--Sobic002G399600 Sobic002G410600 Sobic002G410600 Sobic008G004200--Sobic002G410600 Sobic004G342000--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G342000--Sobic001G341700 Sobic004G211700 Sobic004G211700 Sobic004G342000--Sobic004G211700 Sobic002G029700 Sobic002G029700 Sobic004G342000--Sobic002G029700 Sobic007G076100 Sobic007G076100 Sobic004G342000--Sobic007G076100 Sobic008G012600 Sobic008G012600 Sobic004G342000--Sobic008G012600 Sobic004G342000--Sobic002G416400 Sobic006G151800 Sobic006G151800 Sobic004G342000--Sobic006G151800 Sobic006G089700 Sobic006G089700 Sobic004G342000--Sobic006G089700 Sobic001G179400--Sobic002G068400 Sobic001G179400--Sobic004G215000 Sobic001G179400--Sobic004G342000 Sobic001G179400--Sobic003G120600 Sobic001G179400--Sobic010G027700 Sobic001G179400--Sobic007G125400 Sobic001G179400--Sobic004G227900 Sobic001G179400--Sobic007G094200 Sobic002G179200 Sobic002G179200 Sobic001G179400--Sobic002G179200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.