Gene annotation
Transcriptome id Sobic.005G228600.1,Sobic.005G228600.2
Synonym Sb05g027660
Functional annotation spo0B-associated GTP-binding protein, putative, expressed
UniProt C5Y8K5
Pfam PF01926 PF01018
Panther DB PTHR11702 PTHR11702:SF31
NCBI CDD KOG1489; Predicted GTP-binding protein (ODN superfamily)
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT1G07615 : GTP-binding protein Obg/CgtA
RAP-DB (Rice) LOC_Os11g47800.1 : spo0B-associated GTP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a055375 , Zm00025a029089
Brachypodium KQJ87086 , PNT62889 , PNT71652 , PNT73159
Barley HORVU4Hr1G027590.3 , HORVU4Hr1G027590.1 , HORVU4Hr1G027590.8 , HORVU4Hr1G027590.7 , HORVU4Hr1G027590.17 , HORVU4Hr1G027590.16 , HORVU4Hr1G027590.15 , HORVU4Hr1G027590.12 , HORVU4Hr1G027590.11 , HORVU4Hr1G027590.10 , HORVU4Hr1G027580.2
Wheat TraesCS1A02G116000 , TraesCS1A02G116000 , TraesCS1A02G116000 , TraesCS1B02G135900 , TraesCS1B02G135900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G093550 - -
2 Sobic.002G322101 - -
3 Sobic.010G133225 - -
4 Sobic.006G147350 - -
5 Sobic.001G249900 - -
6 Sobic.007G149750 - -
7 Sobic.003G288500 - -
8 Sobic.003G255850 - -
9 Sobic.008G024900 expressed protein -
10 Sobic.010G173600 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
11 Sobic.003G118650 - -
12 Sobic.002G397700 - -
13 Sobic.004G234766 - -
14 Sobic.010G107901 - K13104: ZNF830, zinc finger protein 830
15 Sobic.002G104600 Ser/Thr protein phosphatase family protein, putative, expressed -
16 Sobic.005G093600 protein kinase domain containing protein, putative, expressed -
17 Sobic.006G017266 - -
18 Sobic.003G337200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat-containing protein, putative, expressed -
19 Sobic.003G128575 - -
20 Sobic.005G068200 expressed protein -


Gene co-expression network
sample Sobic005G228600 Sobic005G228600 Sobic006G093550 Sobic006G093550 Sobic005G228600--Sobic006G093550 Sobic002G322101 Sobic002G322101 Sobic005G228600--Sobic002G322101 Sobic010G133225 Sobic010G133225 Sobic005G228600--Sobic010G133225 Sobic006G147350 Sobic006G147350 Sobic005G228600--Sobic006G147350 Sobic001G249900 Sobic001G249900 Sobic005G228600--Sobic001G249900 Sobic007G149750 Sobic007G149750 Sobic005G228600--Sobic007G149750 Sobic003G288500 Sobic003G288500 Sobic005G228600--Sobic003G288500 Sobic003G255850 Sobic003G255850 Sobic005G228600--Sobic003G255850 Sobic008G024900 Sobic008G024900 Sobic005G228600--Sobic008G024900 Sobic006G093550--Sobic002G322101 Sobic004G234766 Sobic004G234766 Sobic006G093550--Sobic004G234766 Sobic002G397700 Sobic002G397700 Sobic006G093550--Sobic002G397700 Sobic010G107901 Sobic010G107901 Sobic006G093550--Sobic010G107901 Sobic006G093550--Sobic001G249900 Sobic006G093550--Sobic007G149750 Sobic006G093550--Sobic006G147350 Sobic006G093550--Sobic010G133225 Sobic010G173600 Sobic010G173600 Sobic006G093550--Sobic010G173600 Sobic002G322101--Sobic006G093550 Sobic002G322101--Sobic007G149750 Sobic002G322101--Sobic004G234766 Sobic002G322101--Sobic010G173600 Sobic002G322101--Sobic003G255850 Sobic002G322101--Sobic006G147350 Sobic002G322101--Sobic001G249900 Sobic002G322101--Sobic002G397700 Sobic002G322101--Sobic010G107901 Sobic010G133225--Sobic004G234766 Sobic010G133225--Sobic006G093550 Sobic010G133225--Sobic010G107901 Sobic010G133225--Sobic002G397700 Sobic010G133225--Sobic002G322101 Sobic010G133225--Sobic001G249900 Sobic010G133225--Sobic003G255850 Sobic010G133225--Sobic006G147350 Sobic003G172450 Sobic003G172450 Sobic010G133225--Sobic003G172450 Sobic006G147350--Sobic010G173600 Sobic006G147350--Sobic001G249900 Sobic006G147350--Sobic003G255850 Sobic005G093600 Sobic005G093600 Sobic006G147350--Sobic005G093600 Sobic003G128575 Sobic003G128575 Sobic006G147350--Sobic003G128575 Sobic006G147350--Sobic002G322101 Sobic006G147350--Sobic007G149750 Sobic006G017266 Sobic006G017266 Sobic006G147350--Sobic006G017266 Sobic006G020350 Sobic006G020350 Sobic006G147350--Sobic006G020350 Sobic001G249900--Sobic006G147350 Sobic001G249900--Sobic006G093550 Sobic001G249900--Sobic002G322101 Sobic001G249900--Sobic007G149750 Sobic001G249900--Sobic010G173600 Sobic001G249900--Sobic004G234766 Sobic001G249900--Sobic003G255850 Sobic001G249900--Sobic002G397700 Sobic001G249900--Sobic010G107901 Sobic007G149750--Sobic002G322101 Sobic007G149750--Sobic010G173600 Sobic007G149750--Sobic006G147350 Sobic007G149750--Sobic006G093550 Sobic007G149750--Sobic003G255850 Sobic007G149750--Sobic001G249900 Sobic007G149750--Sobic004G234766 Sobic007G149750--Sobic005G093600 Sobic007G149750--Sobic003G128575 Sobic003G288500--Sobic006G017266 Sobic003G288500--Sobic005G093600 Sobic007G004750 Sobic007G004750 Sobic003G288500--Sobic007G004750 Sobic001G293900 Sobic001G293900 Sobic003G288500--Sobic001G293900 Sobic008G157700 Sobic008G157700 Sobic003G288500--Sobic008G157700 Sobic003G288500--Sobic010G173600 Sobic003G288500--Sobic003G128575 Sobic006G124850 Sobic006G124850 Sobic003G288500--Sobic006G124850 Sobic003G288500--Sobic002G322101 Sobic003G255850--Sobic010G173600 Sobic003G255850--Sobic006G147350 Sobic003G255850--Sobic002G322101 Sobic003G255850--Sobic005G093600 Sobic003G255850--Sobic007G149750 Sobic003G255850--Sobic003G128575 Sobic003G255850--Sobic006G017266 Sobic003G255850--Sobic006G020350 Sobic003G255850--Sobic001G249900 Sobic008G024900--Sobic006G093550 Sobic008G024900--Sobic004G234766 Sobic008G024900--Sobic010G107901 Sobic008G024900--Sobic002G397700 Sobic008G024900--Sobic003G172450 Sobic001G054050 Sobic001G054050 Sobic008G024900--Sobic001G054050 Sobic008G024900--Sobic002G322101 Sobic008G024900--Sobic001G249900 Sobic005G167100 Sobic005G167100 Sobic008G024900--Sobic005G167100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.