Gene annotation
Transcriptome id Sobic.006G058732.1
Synonym -
Functional annotation -
UniProt A0A1Z5RCF9
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G61890 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g32620.1 : ethylene-responsive transcription factor ERF114, putative, expressed
MaizeGDB (Corn) Zm00025a005317 , Zm00025a043851 , Zm00025a037299 , Zm00025a052430 , Zm00025a033098 , Zm00025a020895 , Zm00025a024332 , Zm00025a011662 , Zm00025a056053 , Zm00025a036079
Brachypodium KQJ82323 , KQJ82324 , KQK23284 , KQJ99644 , KQK00586
Barley HORVU2Hr1G018830.1 , HORVU2Hr1G018830.2 , HORVU7Hr1G055290.34 , HORVU7Hr1G055290.33 , HORVU7Hr1G055290.30 , HORVU7Hr1G055290.31 , HORVU4Hr1G077310.1 , HORVU4Hr1G077310.2 , HORVU4Hr1G077310.3 , HORVU4Hr1G077310.4 , HORVU4Hr1G077310.7 , HORVU4Hr1G077310.8 , HORVU4Hr1G077310.5 , HORVU1Hr1G082310.1
Wheat TraesCS2B02G127800 , TraesCS2A02G288000 , TraesCS2B02G304800 , TraesCS4B02G299500 , TraesCS4B02G299400 , TraesCS7B02G162100 , TraesCS3B02G412500 , TraesCS5A02G314600 , TraesCS2A02G109800 , TraesCS1D02G272600 , TraesCS2D02G286300 , TraesCS7D02G265000 , TraesCS7A02G264100 , TraesCS4D02G298400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G071000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
2 Sobic.010G266900 expressed protein -
3 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
4 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
5 Sobic.009G028300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
6 Sobic.001G380400 reticulon domain containing protein, putative, expressed -
7 Sobic.001G157200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
8 Sobic.004G158901 - -
9 Sobic.005G105300 expressed protein -
10 Sobic.010G224200 MYB family transcription factor, putative, expressed -
11 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
12 Sobic.006G086000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
13 Sobic.004G307000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
14 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -
15 Sobic.007G025700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
16 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
17 Sobic.004G058000 VQ domain containing protein, putative, expressed -
18 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
19 Sobic.007G125900 protein kinase domain containing protein, expressed -
20 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic006G058732 Sobic006G058732 Sobic001G071000 Sobic001G071000 Sobic006G058732--Sobic001G071000 Sobic010G266900 Sobic010G266900 Sobic006G058732--Sobic010G266900 Sobic005G117400 Sobic005G117400 Sobic006G058732--Sobic005G117400 Sobic002G249000 Sobic002G249000 Sobic006G058732--Sobic002G249000 Sobic009G028300 Sobic009G028300 Sobic006G058732--Sobic009G028300 Sobic001G380400 Sobic001G380400 Sobic006G058732--Sobic001G380400 Sobic001G157200 Sobic001G157200 Sobic006G058732--Sobic001G157200 Sobic004G158901 Sobic004G158901 Sobic006G058732--Sobic004G158901 Sobic005G105300 Sobic005G105300 Sobic006G058732--Sobic005G105300 Sobic003G293700 Sobic003G293700 Sobic001G071000--Sobic003G293700 Sobic004G288400 Sobic004G288400 Sobic001G071000--Sobic004G288400 Sobic001G071000--Sobic006G058732 Sobic010G143900 Sobic010G143900 Sobic001G071000--Sobic010G143900 Sobic002G245900 Sobic002G245900 Sobic001G071000--Sobic002G245900 Sobic010G067300 Sobic010G067300 Sobic001G071000--Sobic010G067300 Sobic007G133600 Sobic007G133600 Sobic001G071000--Sobic007G133600 Sobic004G099500 Sobic004G099500 Sobic001G071000--Sobic004G099500 Sobic004G335600 Sobic004G335600 Sobic001G071000--Sobic004G335600 Sobic007G212200 Sobic007G212200 Sobic010G266900--Sobic007G212200 Sobic009G177800 Sobic009G177800 Sobic010G266900--Sobic009G177800 Sobic006G159300 Sobic006G159300 Sobic010G266900--Sobic006G159300 Sobic003G429300 Sobic003G429300 Sobic010G266900--Sobic003G429300 Sobic004G058500 Sobic004G058500 Sobic010G266900--Sobic004G058500 Sobic009G155200 Sobic009G155200 Sobic010G266900--Sobic009G155200 Sobic002G195900 Sobic002G195900 Sobic010G266900--Sobic002G195900 Sobic004G035200 Sobic004G035200 Sobic010G266900--Sobic004G035200 Sobic010G200700 Sobic010G200700 Sobic010G266900--Sobic010G200700 Sobic005G117400--Sobic004G158901 Sobic007G125900 Sobic007G125900 Sobic005G117400--Sobic007G125900 Sobic004G058000 Sobic004G058000 Sobic005G117400--Sobic004G058000 Sobic005G117400--Sobic002G249000 Sobic003G348400 Sobic003G348400 Sobic005G117400--Sobic003G348400 Sobic004G050000 Sobic004G050000 Sobic005G117400--Sobic004G050000 Sobic003G232900 Sobic003G232900 Sobic005G117400--Sobic003G232900 Sobic007G025700 Sobic007G025700 Sobic005G117400--Sobic007G025700 Sobic010G224200 Sobic010G224200 Sobic005G117400--Sobic010G224200 Sobic004G277000 Sobic004G277000 Sobic002G249000--Sobic004G277000 Sobic001G010400 Sobic001G010400 Sobic002G249000--Sobic001G010400 Sobic002G249000--Sobic004G050000 Sobic009G003900 Sobic009G003900 Sobic002G249000--Sobic009G003900 Sobic002G249000--Sobic010G224200 Sobic002G249000--Sobic005G117400 Sobic010G176700 Sobic010G176700 Sobic002G249000--Sobic010G176700 Sobic002G180600 Sobic002G180600 Sobic002G249000--Sobic002G180600 Sobic004G307000 Sobic004G307000 Sobic002G249000--Sobic004G307000 Sobic003G363200 Sobic003G363200 Sobic009G028300--Sobic003G363200 Sobic010G105500 Sobic010G105500 Sobic009G028300--Sobic010G105500 Sobic003G431000 Sobic003G431000 Sobic009G028300--Sobic003G431000 Sobic009G167000 Sobic009G167000 Sobic009G028300--Sobic009G167000 Sobic005G139700 Sobic005G139700 Sobic009G028300--Sobic005G139700 Sobic004G297200 Sobic004G297200 Sobic009G028300--Sobic004G297200 Sobic001G189700 Sobic001G189700 Sobic009G028300--Sobic001G189700 Sobic006G184400 Sobic006G184400 Sobic009G028300--Sobic006G184400 Sobic009G028300--Sobic010G200700 Sobic010G047400 Sobic010G047400 Sobic001G380400--Sobic010G047400 Sobic003G220600 Sobic003G220600 Sobic001G380400--Sobic003G220600 Sobic001G403700 Sobic001G403700 Sobic001G380400--Sobic001G403700 Sobic001G380400--Sobic002G180600 Sobic001G064800 Sobic001G064800 Sobic001G380400--Sobic001G064800 Sobic004G145200 Sobic004G145200 Sobic001G380400--Sobic004G145200 Sobic007G098400 Sobic007G098400 Sobic001G380400--Sobic007G098400 Sobic009G127000 Sobic009G127000 Sobic001G380400--Sobic009G127000 Sobic002G296300 Sobic002G296300 Sobic001G380400--Sobic002G296300 Sobic002G379866 Sobic002G379866 Sobic001G157200--Sobic002G379866 Sobic002G222800 Sobic002G222800 Sobic001G157200--Sobic002G222800 Sobic001G074200 Sobic001G074200 Sobic001G157200--Sobic001G074200 Sobic001G157200--Sobic005G117400 Sobic001G157200--Sobic004G158901 Sobic001G157200--Sobic004G058000 Sobic001G157200--Sobic007G125900 Sobic001G157200--Sobic005G105300 Sobic004G067200 Sobic004G067200 Sobic001G157200--Sobic004G067200 Sobic002G224100 Sobic002G224100 Sobic004G158901--Sobic002G224100 Sobic004G158901--Sobic005G117400 Sobic004G158901--Sobic004G058000 Sobic009G241700 Sobic009G241700 Sobic004G158901--Sobic009G241700 Sobic006G192500 Sobic006G192500 Sobic004G158901--Sobic006G192500 Sobic001G399100 Sobic001G399100 Sobic004G158901--Sobic001G399100 Sobic004G158901--Sobic002G379866 Sobic004G158901--Sobic007G025700 Sobic010G163000 Sobic010G163000 Sobic004G158901--Sobic010G163000 Sobic004G267500 Sobic004G267500 Sobic005G105300--Sobic004G267500 Sobic005G105300--Sobic004G158901 Sobic005G105300--Sobic002G379866 Sobic005G105300--Sobic005G117400 Sobic005G105300--Sobic002G224100 Sobic005G105300--Sobic007G025700 Sobic005G105300--Sobic001G074200 Sobic005G105300--Sobic001G157200 Sobic003G189200 Sobic003G189200 Sobic005G105300--Sobic003G189200
Octagon: transcription factors


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