Gene annotation
Transcriptome id Sobic.001G071000.1
Synonym NAC042, Sb01g006410, anac042
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence (PubMedID : 27586543)
no apical meristem protein, putative, expressed
UniProt C5WZ37
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G43000 : NAC domain containing protein 42
RAP-DB (Rice) LOC_Os03g56580.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a016671 , Zm00025a008395 , Zm00025a056131 , Zm00025a004806
Brachypodium KQK12943 , KQJ82828 , KQK20999
Barley HORVU5Hr1G099390.3 , HORVU5Hr1G099390.2 , HORVU5Hr1G099470.1 , HORVU5Hr1G099470.2 , HORVU5Hr1G099470.3 , HORVU5Hr1G099470.4 , HORVU5Hr1G099470.5 , HORVU5Hr1G099460.5 , HORVU5Hr1G099460.4 , HORVU5Hr1G099460.3 , HORVU5Hr1G099460.2 , HORVU5Hr1G099460.1
Wheat TraesCS5B02G415600 , TraesCS5A02G411700 , TraesCS5B02G415400 , TraesCS5B02G415700 , TraesCS5D02G421000 , TraesCS5D02G421000 , TraesCS5A02G411900 , TraesCS5D02G420800 , TraesCS4B02G384700 , TraesCS5A02G411800 , TraesCS5D02G421100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G293700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
2 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.006G058732 - -
4 Sobic.010G143900 glycosyltransferase protein, putative, expressed -
5 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
6 Sobic.010G067300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
7 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
8 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
9 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
10 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.004G202000 expressed protein -
12 Sobic.007G045700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
13 Sobic.009G177700 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
14 Sobic.006G039700 expressed protein -
15 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
16 Sobic.007G140300 dephospho-CoA kinase, putative, expressed K00859: dephospho-CoA kinase
17 Sobic.008G034500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
18 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
19 Sobic.001G400700 pathogenesis-related Bet v I family protein, putative, expressed -
20 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G071000 Sobic001G071000 Sobic003G293700 Sobic003G293700 Sobic001G071000--Sobic003G293700 Sobic004G288400 Sobic004G288400 Sobic001G071000--Sobic004G288400 Sobic006G058732 Sobic006G058732 Sobic001G071000--Sobic006G058732 Sobic010G143900 Sobic010G143900 Sobic001G071000--Sobic010G143900 Sobic002G245900 Sobic002G245900 Sobic001G071000--Sobic002G245900 Sobic010G067300 Sobic010G067300 Sobic001G071000--Sobic010G067300 Sobic007G133600 Sobic007G133600 Sobic001G071000--Sobic007G133600 Sobic004G099500 Sobic004G099500 Sobic001G071000--Sobic004G099500 Sobic004G335600 Sobic004G335600 Sobic001G071000--Sobic004G335600 Sobic007G124400 Sobic007G124400 Sobic003G293700--Sobic007G124400 Sobic002G339400 Sobic002G339400 Sobic003G293700--Sobic002G339400 Sobic003G293700--Sobic004G288400 Sobic003G293700--Sobic007G133600 Sobic003G293700--Sobic001G071000 Sobic001G494150 Sobic001G494150 Sobic003G293700--Sobic001G494150 Sobic001G428700 Sobic001G428700 Sobic003G293700--Sobic001G428700 Sobic003G293700--Sobic002G245900 Sobic010G099600 Sobic010G099600 Sobic003G293700--Sobic010G099600 Sobic006G166700 Sobic006G166700 Sobic004G288400--Sobic006G166700 Sobic010G014300 Sobic010G014300 Sobic004G288400--Sobic010G014300 Sobic005G198300 Sobic005G198300 Sobic004G288400--Sobic005G198300 Sobic001G239400 Sobic001G239400 Sobic004G288400--Sobic001G239400 Sobic004G288400--Sobic002G339400 Sobic010G087200 Sobic010G087200 Sobic004G288400--Sobic010G087200 Sobic004G288400--Sobic001G428700 Sobic004G288400--Sobic007G133600 Sobic001G005000 Sobic001G005000 Sobic004G288400--Sobic001G005000 Sobic006G058732--Sobic001G071000 Sobic010G266900 Sobic010G266900 Sobic006G058732--Sobic010G266900 Sobic005G117400 Sobic005G117400 Sobic006G058732--Sobic005G117400 Sobic002G249000 Sobic002G249000 Sobic006G058732--Sobic002G249000 Sobic009G028300 Sobic009G028300 Sobic006G058732--Sobic009G028300 Sobic001G380400 Sobic001G380400 Sobic006G058732--Sobic001G380400 Sobic001G157200 Sobic001G157200 Sobic006G058732--Sobic001G157200 Sobic004G158901 Sobic004G158901 Sobic006G058732--Sobic004G158901 Sobic005G105300 Sobic005G105300 Sobic006G058732--Sobic005G105300 Sobic009G130100 Sobic009G130100 Sobic010G143900--Sobic009G130100 Sobic010G194100 Sobic010G194100 Sobic010G143900--Sobic010G194100 Sobic003G215200 Sobic003G215200 Sobic010G143900--Sobic003G215200 Sobic003G417100 Sobic003G417100 Sobic010G143900--Sobic003G417100 Sobic002G185800 Sobic002G185800 Sobic010G143900--Sobic002G185800 Sobic003G373100 Sobic003G373100 Sobic010G143900--Sobic003G373100 Sobic010G252500 Sobic010G252500 Sobic010G143900--Sobic010G252500 Sobic001G108000 Sobic001G108000 Sobic010G143900--Sobic001G108000 Sobic001G494000 Sobic001G494000 Sobic010G143900--Sobic001G494000 Sobic009G008300 Sobic009G008300 Sobic002G245900--Sobic009G008300 Sobic002G245900--Sobic007G133600 Sobic002G245900--Sobic010G067300 Sobic001G076800 Sobic001G076800 Sobic002G245900--Sobic001G076800 Sobic002G245900--Sobic004G335600 Sobic004G042700 Sobic004G042700 Sobic002G245900--Sobic004G042700 Sobic002G245900--Sobic004G099500 Sobic002G245900--Sobic001G239400 Sobic009G032700 Sobic009G032700 Sobic002G245900--Sobic009G032700 Sobic010G067300--Sobic002G245900 Sobic010G067400 Sobic010G067400 Sobic010G067300--Sobic010G067400 Sobic006G277600 Sobic006G277600 Sobic010G067300--Sobic006G277600 Sobic010G184800 Sobic010G184800 Sobic010G067300--Sobic010G184800 Sobic006G092500 Sobic006G092500 Sobic010G067300--Sobic006G092500 Sobic009G111000 Sobic009G111000 Sobic010G067300--Sobic009G111000 Sobic010G212800 Sobic010G212800 Sobic010G067300--Sobic010G212800 Sobic001G476500 Sobic001G476500 Sobic010G067300--Sobic001G476500 Sobic003G117600 Sobic003G117600 Sobic010G067300--Sobic003G117600 Sobic007G133600--Sobic009G008300 Sobic007G133600--Sobic002G245900 Sobic007G133600--Sobic001G239400 Sobic007G133600--Sobic001G005000 Sobic004G249700 Sobic004G249700 Sobic007G133600--Sobic004G249700 Sobic007G133600--Sobic006G166700 Sobic007G133600--Sobic004G288400 Sobic003G057600 Sobic003G057600 Sobic007G133600--Sobic003G057600 Sobic007G133600--Sobic010G087200 Sobic010G057100 Sobic010G057100 Sobic004G099500--Sobic010G057100 Sobic004G099500--Sobic004G335600 Sobic009G015000 Sobic009G015000 Sobic004G099500--Sobic009G015000 Sobic003G338966 Sobic003G338966 Sobic004G099500--Sobic003G338966 Sobic008G172100 Sobic008G172100 Sobic004G099500--Sobic008G172100 Sobic007G045700 Sobic007G045700 Sobic004G099500--Sobic007G045700 Sobic003G057366 Sobic003G057366 Sobic004G099500--Sobic003G057366 Sobic004G271400 Sobic004G271400 Sobic004G099500--Sobic004G271400 Sobic003G322532 Sobic003G322532 Sobic004G099500--Sobic003G322532 Sobic004G335600--Sobic004G271400 Sobic002G414700 Sobic002G414700 Sobic004G335600--Sobic002G414700 Sobic009G177700 Sobic009G177700 Sobic004G335600--Sobic009G177700 Sobic003G152600 Sobic003G152600 Sobic004G335600--Sobic003G152600 Sobic004G335600--Sobic004G099500 Sobic009G105600 Sobic009G105600 Sobic004G335600--Sobic009G105600 Sobic004G335600--Sobic010G057100 Sobic004G335600--Sobic008G172100 Sobic004G335600--Sobic007G045700
Octagon: transcription factors


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