Gene annotation
Transcriptome id Sobic.007G140300.1
Synonym Sb07g021590, ATCOAE
Functional annotation dephospho-CoA kinase, putative, expressed
UniProt C5YLK2
Pfam PF01121
Panther DB PTHR10695
NCBI CDD KOG3220; Similar to bacterial dephospho-CoA kinase
KEGG Orthology K00859; dephospho-CoA kinase
Gene Ontology GO:0015937; coenzyme A biosynthetic process GO:0005524ATP binding GO:0004140dephospho-CoA kinase activity


Orthologs (automatic annotation)
TAIR AT2G27490 : dephospho-CoA kinase family
RAP-DB (Rice) LOC_Os01g25880.1 : dephospho-CoA kinase, putative, expressed
MaizeGDB (Corn) Zm00025a005854 , Zm00025a036266
Brachypodium KQJ93728
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G140300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
2 Sobic.002G179300 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
3 Sobic.002G257300 ribulose-phosphate 3-epimerase, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
4 Sobic.002G398901 - -
5 Sobic.010G060500 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
6 Sobic.009G022400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
7 Sobic.003G363800 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
8 Sobic.001G084900 expressed protein -
9 Sobic.010G059300 cytochrome b-c1 complex subunit 8, putative, expressed -
10 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
11 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.004G060500 fiber protein Fb15, putative, expressed -
13 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
14 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
15 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
16 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
17 Sobic.001G418900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
19 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
20 Sobic.010G023800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor, putative, expressed K00800: 3-phosphoshikimate 1-carboxyvinyltransferase


Gene co-expression network
sample Sobic007G140300 Sobic007G140300 Sobic001G040100 Sobic001G040100 Sobic007G140300--Sobic001G040100 Sobic002G179300 Sobic002G179300 Sobic007G140300--Sobic002G179300 Sobic002G257300 Sobic002G257300 Sobic007G140300--Sobic002G257300 Sobic002G398901 Sobic002G398901 Sobic007G140300--Sobic002G398901 Sobic010G060500 Sobic010G060500 Sobic007G140300--Sobic010G060500 Sobic009G022400 Sobic009G022400 Sobic007G140300--Sobic009G022400 Sobic003G363800 Sobic003G363800 Sobic007G140300--Sobic003G363800 Sobic001G084900 Sobic001G084900 Sobic007G140300--Sobic001G084900 Sobic010G059300 Sobic010G059300 Sobic007G140300--Sobic010G059300 Sobic005G112800 Sobic005G112800 Sobic001G040100--Sobic005G112800 Sobic003G219800 Sobic003G219800 Sobic001G040100--Sobic003G219800 Sobic002G356400 Sobic002G356400 Sobic001G040100--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic001G040100--Sobic003G209000 Sobic003G151600 Sobic003G151600 Sobic001G040100--Sobic003G151600 Sobic003G410500 Sobic003G410500 Sobic001G040100--Sobic003G410500 Sobic006G156000 Sobic006G156000 Sobic001G040100--Sobic006G156000 Sobic002G418400 Sobic002G418400 Sobic001G040100--Sobic002G418400 Sobic001G040100--Sobic002G257300 Sobic010G070500 Sobic010G070500 Sobic002G179300--Sobic010G070500 Sobic004G008400 Sobic004G008400 Sobic002G179300--Sobic004G008400 Sobic002G286900 Sobic002G286900 Sobic002G179300--Sobic002G286900 Sobic008G108601 Sobic008G108601 Sobic002G179300--Sobic008G108601 Sobic007G178600 Sobic007G178600 Sobic002G179300--Sobic007G178600 Sobic006G057200 Sobic006G057200 Sobic002G179300--Sobic006G057200 Sobic003G387900 Sobic003G387900 Sobic002G179300--Sobic003G387900 Sobic001G510800 Sobic001G510800 Sobic002G179300--Sobic001G510800 Sobic001G334300 Sobic001G334300 Sobic002G179300--Sobic001G334300 Sobic002G257300--Sobic002G398901 Sobic001G418900 Sobic001G418900 Sobic002G257300--Sobic001G418900 Sobic002G190900 Sobic002G190900 Sobic002G257300--Sobic002G190900 Sobic002G257300--Sobic003G209000 Sobic004G051700 Sobic004G051700 Sobic002G257300--Sobic004G051700 Sobic010G239500 Sobic010G239500 Sobic002G257300--Sobic010G239500 Sobic002G257300--Sobic002G418400 Sobic009G119900 Sobic009G119900 Sobic002G257300--Sobic009G119900 Sobic002G257300--Sobic003G363800 Sobic002G398901--Sobic002G190900 Sobic010G012500 Sobic010G012500 Sobic002G398901--Sobic010G012500 Sobic009G176000 Sobic009G176000 Sobic002G398901--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic002G398901--Sobic007G051000 Sobic004G211833 Sobic004G211833 Sobic002G398901--Sobic004G211833 Sobic002G081600 Sobic002G081600 Sobic002G398901--Sobic002G081600 Sobic002G398901--Sobic002G418400 Sobic006G083500 Sobic006G083500 Sobic002G398901--Sobic006G083500 Sobic009G215200 Sobic009G215200 Sobic002G398901--Sobic009G215200 Sobic003G346600 Sobic003G346600 Sobic010G060500--Sobic003G346600 Sobic006G137100 Sobic006G137100 Sobic010G060500--Sobic006G137100 Sobic010G060500--Sobic004G008400 Sobic009G166500 Sobic009G166500 Sobic010G060500--Sobic009G166500 Sobic009G050300 Sobic009G050300 Sobic010G060500--Sobic009G050300 Sobic010G060500--Sobic007G178600 Sobic002G255300 Sobic002G255300 Sobic010G060500--Sobic002G255300 Sobic006G213000 Sobic006G213000 Sobic010G060500--Sobic006G213000 Sobic009G163800 Sobic009G163800 Sobic010G060500--Sobic009G163800 Sobic002G049300 Sobic002G049300 Sobic009G022400--Sobic002G049300 Sobic009G022400--Sobic007G178600 Sobic001G085400 Sobic001G085400 Sobic009G022400--Sobic001G085400 Sobic001G175300 Sobic001G175300 Sobic009G022400--Sobic001G175300 Sobic006G221200 Sobic006G221200 Sobic009G022400--Sobic006G221200 Sobic009G022400--Sobic009G163800 Sobic003G280700 Sobic003G280700 Sobic009G022400--Sobic003G280700 Sobic009G022400--Sobic008G108601 Sobic004G104100 Sobic004G104100 Sobic009G022400--Sobic004G104100 Sobic003G363800--Sobic003G346600 Sobic003G363800--Sobic006G137100 Sobic003G363800--Sobic007G178600 Sobic002G047600 Sobic002G047600 Sobic003G363800--Sobic002G047600 Sobic003G363800--Sobic003G387900 Sobic009G076400 Sobic009G076400 Sobic003G363800--Sobic009G076400 Sobic003G363800--Sobic001G085400 Sobic004G331400 Sobic004G331400 Sobic003G363800--Sobic004G331400 Sobic006G216600 Sobic006G216600 Sobic003G363800--Sobic006G216600 Sobic010G106200 Sobic010G106200 Sobic001G084900--Sobic010G106200 Sobic006G147000 Sobic006G147000 Sobic001G084900--Sobic006G147000 Sobic009G180000 Sobic009G180000 Sobic001G084900--Sobic009G180000 Sobic010G153100 Sobic010G153100 Sobic001G084900--Sobic010G153100 Sobic001G084900--Sobic002G190900 Sobic003G155400 Sobic003G155400 Sobic001G084900--Sobic003G155400 Sobic003G072300 Sobic003G072300 Sobic001G084900--Sobic003G072300 Sobic001G084900--Sobic002G081600 Sobic002G187500 Sobic002G187500 Sobic001G084900--Sobic002G187500 Sobic004G060500 Sobic004G060500 Sobic010G059300--Sobic004G060500 Sobic001G519000 Sobic001G519000 Sobic010G059300--Sobic001G519000 Sobic004G183200 Sobic004G183200 Sobic010G059300--Sobic004G183200 Sobic001G047800 Sobic001G047800 Sobic010G059300--Sobic001G047800 Sobic010G264300 Sobic010G264300 Sobic010G059300--Sobic010G264300 Sobic003G218400 Sobic003G218400 Sobic010G059300--Sobic003G218400 Sobic001G095632 Sobic001G095632 Sobic010G059300--Sobic001G095632 Sobic010G059300--Sobic002G418400 Sobic003G296800 Sobic003G296800 Sobic010G059300--Sobic003G296800
Octagon: transcription factors


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