Gene annotation
Transcriptome id Sobic.006G091500.2,Sobic.006G091500.1
Synonym Sb06g017660, AGL12, XAL1
Functional annotation OsMADS26 - MADS-box family gene with MIKCc type-box, expressed
UniProt A0A1B6PL25 , A0A1B6PL24
Pfam PF00319 PF01486
Panther DB PTHR11945 PTHR11945:SF182
NCBI CDD KOG0014; MADS box transcription factor
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding GO:0006355regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G71692 : AGAMOUS-like 12
RAP-DB (Rice) LOC_Os08g02070.1 : OsMADS26 - MADS-box family gene with MIKCc type-box, expressed
MaizeGDB (Corn) Zm00025a028771 , Zm00025a056130
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G115600 protein kinase family protein, putative, expressed -
2 Sobic.004G317401 - -
3 Sobic.007G191400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR7 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
4 Sobic.001G001132 - -
5 Sobic.007G055400 expressed protein -
6 Sobic.003G186132 - -
7 Sobic.010G083300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
8 Sobic.004G358100 transporter family protein, putative, expressed -
9 Sobic.007G176300 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
10 Sobic.006G223850 - -
11 Sobic.004G091500 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.005G227900 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
13 Sobic.006G130700 expressed protein K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.008G020400 - -
15 Sobic.004G176100 expressed protein -
16 Sobic.002G373700 expressed protein -
17 Sobic.009G240100 receptor-like protein kinase homolog RK20-1, putative, expressed -
18 Sobic.009G025950 - -
19 Sobic.010G083100 CXE carboxylesterase, putative, expressed -
20 Sobic.008G014601 - -


Gene co-expression network
sample Sobic006G091500 Sobic006G091500 Sobic007G115600 Sobic007G115600 Sobic006G091500--Sobic007G115600 Sobic004G317401 Sobic004G317401 Sobic006G091500--Sobic004G317401 Sobic007G191400 Sobic007G191400 Sobic006G091500--Sobic007G191400 Sobic001G001132 Sobic001G001132 Sobic006G091500--Sobic001G001132 Sobic007G055400 Sobic007G055400 Sobic006G091500--Sobic007G055400 Sobic003G186132 Sobic003G186132 Sobic006G091500--Sobic003G186132 Sobic010G083300 Sobic010G083300 Sobic006G091500--Sobic010G083300 Sobic004G358100 Sobic004G358100 Sobic006G091500--Sobic004G358100 Sobic007G176300 Sobic007G176300 Sobic006G091500--Sobic007G176300 Sobic001G403900 Sobic001G403900 Sobic007G115600--Sobic001G403900 Sobic008G154500 Sobic008G154500 Sobic007G115600--Sobic008G154500 Sobic006G281300 Sobic006G281300 Sobic007G115600--Sobic006G281300 Sobic006G223850 Sobic006G223850 Sobic007G115600--Sobic006G223850 Sobic010G083100 Sobic010G083100 Sobic007G115600--Sobic010G083100 Sobic006G107332 Sobic006G107332 Sobic007G115600--Sobic006G107332 Sobic010G129900 Sobic010G129900 Sobic007G115600--Sobic010G129900 Sobic007G115600--Sobic007G176300 Sobic002G221000 Sobic002G221000 Sobic007G115600--Sobic002G221000 Sobic004G317401--Sobic007G191400 Sobic004G202900 Sobic004G202900 Sobic004G317401--Sobic004G202900 Sobic009G240100 Sobic009G240100 Sobic004G317401--Sobic009G240100 Sobic004G317401--Sobic007G176300 Sobic003G059600 Sobic003G059600 Sobic004G317401--Sobic003G059600 Sobic004G266100 Sobic004G266100 Sobic004G317401--Sobic004G266100 Sobic005G227900 Sobic005G227900 Sobic004G317401--Sobic005G227900 Sobic002G373700 Sobic002G373700 Sobic004G317401--Sobic002G373700 Sobic010G019600 Sobic010G019600 Sobic004G317401--Sobic010G019600 Sobic007G191400--Sobic004G317401 Sobic007G191400--Sobic007G176300 Sobic007G191400--Sobic009G240100 Sobic007G191400--Sobic002G373700 Sobic006G130700 Sobic006G130700 Sobic007G191400--Sobic006G130700 Sobic008G014601 Sobic008G014601 Sobic007G191400--Sobic008G014601 Sobic002G185400 Sobic002G185400 Sobic007G191400--Sobic002G185400 Sobic007G191400--Sobic007G115600 Sobic009G025950 Sobic009G025950 Sobic007G191400--Sobic009G025950 Sobic001G001132--Sobic002G185400 Sobic001G001132--Sobic007G055400 Sobic001G084200 Sobic001G084200 Sobic001G001132--Sobic001G084200 Sobic006G138966 Sobic006G138966 Sobic001G001132--Sobic006G138966 Sobic009G168700 Sobic009G168700 Sobic001G001132--Sobic009G168700 Sobic001G192750 Sobic001G192750 Sobic001G001132--Sobic001G192750 Sobic004G067850 Sobic004G067850 Sobic001G001132--Sobic004G067850 Sobic008G032850 Sobic008G032850 Sobic001G001132--Sobic008G032850 Sobic002G342200 Sobic002G342200 Sobic001G001132--Sobic002G342200 SobicK044402 SobicK044402 Sobic007G055400--SobicK044402 Sobic003G143401 Sobic003G143401 Sobic007G055400--Sobic003G143401 Sobic007G055400--Sobic004G067850 Sobic007G055400--Sobic008G032850 Sobic007G055400--Sobic001G001132 Sobic009G227650 Sobic009G227650 Sobic007G055400--Sobic009G227650 Sobic008G085600 Sobic008G085600 Sobic007G055400--Sobic008G085600 Sobic010G262650 Sobic010G262650 Sobic007G055400--Sobic010G262650 Sobic010G158601 Sobic010G158601 Sobic007G055400--Sobic010G158601 Sobic005G159400 Sobic005G159400 Sobic003G186132--Sobic005G159400 Sobic006G185000 Sobic006G185000 Sobic003G186132--Sobic006G185000 Sobic006G009800 Sobic006G009800 Sobic003G186132--Sobic006G009800 Sobic001G506500 Sobic001G506500 Sobic003G186132--Sobic001G506500 Sobic002G308200 Sobic002G308200 Sobic003G186132--Sobic002G308200 Sobic003G186132--Sobic007G115600 Sobic003G186132--Sobic006G091500 Sobic004G091500 Sobic004G091500 Sobic003G186132--Sobic004G091500 Sobic002G372100 Sobic002G372100 Sobic003G186132--Sobic002G372100 Sobic001G075300 Sobic001G075300 Sobic010G083300--Sobic001G075300 Sobic010G083300--Sobic002G185400 Sobic005G196700 Sobic005G196700 Sobic010G083300--Sobic005G196700 Sobic010G083300--Sobic007G115600 Sobic010G083300--Sobic006G223850 Sobic004G163400 Sobic004G163400 Sobic010G083300--Sobic004G163400 Sobic007G077600 Sobic007G077600 Sobic010G083300--Sobic007G077600 Sobic010G083050 Sobic010G083050 Sobic010G083300--Sobic010G083050 Sobic003G331900 Sobic003G331900 Sobic010G083300--Sobic003G331900 Sobic001G341400 Sobic001G341400 Sobic004G358100--Sobic001G341400 Sobic004G188100 Sobic004G188100 Sobic004G358100--Sobic004G188100 Sobic010G082100 Sobic010G082100 Sobic004G358100--Sobic010G082100 Sobic008G168800 Sobic008G168800 Sobic004G358100--Sobic008G168800 Sobic004G358100--Sobic004G317401 Sobic001G349200 Sobic001G349200 Sobic004G358100--Sobic001G349200 Sobic004G358100--Sobic001G506500 Sobic003G419200 Sobic003G419200 Sobic004G358100--Sobic003G419200 Sobic007G186700 Sobic007G186700 Sobic004G358100--Sobic007G186700 Sobic002G342901 Sobic002G342901 Sobic007G176300--Sobic002G342901 Sobic003G146450 Sobic003G146450 Sobic007G176300--Sobic003G146450 Sobic002G124766 Sobic002G124766 Sobic007G176300--Sobic002G124766 Sobic009G156700 Sobic009G156700 Sobic007G176300--Sobic009G156700 Sobic009G197350 Sobic009G197350 Sobic007G176300--Sobic009G197350 Sobic007G145300 Sobic007G145300 Sobic007G176300--Sobic007G145300 Sobic002G269800 Sobic002G269800 Sobic007G176300--Sobic002G269800 Sobic003G126700 Sobic003G126700 Sobic007G176300--Sobic003G126700 Sobic006G223700 Sobic006G223700 Sobic007G176300--Sobic006G223700
Octagon: transcription factors


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