Gene annotation
Transcriptome id Sobic.004G176100.1
Synonym Sb04g022630
Functional annotation expressed protein
UniProt A0A194YRE7
Pfam -
Panther DB PTHR32054 PTHR32054:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g34870.1 : expressed protein
MaizeGDB (Corn) Zm00025a052039 , Zm00025a020659
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G055700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.005G015600 cytochrome P450 72A1, putative, expressed -
3 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
4 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
5 Sobic.006G278300 thaumatin, putative, expressed -
6 Sobic.007G176700 bZIP transcription factor domain containing protein, expressed -
7 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
8 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
9 Sobic.003G215350 - -
10 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
11 Sobic.007G186700 resistance protein, putative, expressed -
12 Sobic.007G119500 expressed protein -
13 Sobic.009G170500 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
14 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
15 Sobic.001G526500 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
16 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.004G348500 RING-H2 finger protein ATL5G, putative, expressed -
18 Sobic.005G106300 expressed protein -
19 Sobic.001G406700 expressed protein -
20 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic004G176100 Sobic004G176100 Sobic008G055700 Sobic008G055700 Sobic004G176100--Sobic008G055700 Sobic005G015600 Sobic005G015600 Sobic004G176100--Sobic005G015600 Sobic001G471800 Sobic001G471800 Sobic004G176100--Sobic001G471800 Sobic004G047600 Sobic004G047600 Sobic004G176100--Sobic004G047600 Sobic006G278300 Sobic006G278300 Sobic004G176100--Sobic006G278300 Sobic007G176700 Sobic007G176700 Sobic004G176100--Sobic007G176700 Sobic003G082700 Sobic003G082700 Sobic004G176100--Sobic003G082700 Sobic005G112000 Sobic005G112000 Sobic004G176100--Sobic005G112000 Sobic003G215350 Sobic003G215350 Sobic004G176100--Sobic003G215350 Sobic006G092100 Sobic006G092100 Sobic008G055700--Sobic006G092100 Sobic002G029500 Sobic002G029500 Sobic008G055700--Sobic002G029500 Sobic008G138700 Sobic008G138700 Sobic008G055700--Sobic008G138700 Sobic007G064900 Sobic007G064900 Sobic008G055700--Sobic007G064900 Sobic005G110511 Sobic005G110511 Sobic008G055700--Sobic005G110511 Sobic005G182900 Sobic005G182900 Sobic008G055700--Sobic005G182900 Sobic002G019000 Sobic002G019000 Sobic008G055700--Sobic002G019000 Sobic010G242800 Sobic010G242800 Sobic008G055700--Sobic010G242800 Sobic008G033100 Sobic008G033100 Sobic008G055700--Sobic008G033100 Sobic005G015600--Sobic004G176100 Sobic003G238200 Sobic003G238200 Sobic005G015600--Sobic003G238200 Sobic006G015000 Sobic006G015000 Sobic005G015600--Sobic006G015000 Sobic003G270000 Sobic003G270000 Sobic005G015600--Sobic003G270000 Sobic001G303600 Sobic001G303600 Sobic005G015600--Sobic001G303600 Sobic005G015600--Sobic008G055700 Sobic005G015600--Sobic003G215350 Sobic010G032500 Sobic010G032500 Sobic005G015600--Sobic010G032500 Sobic008G010700 Sobic008G010700 Sobic005G015600--Sobic008G010700 Sobic002G146000 Sobic002G146000 Sobic001G471800--Sobic002G146000 Sobic001G471800--Sobic004G047600 Sobic006G224500 Sobic006G224500 Sobic001G471800--Sobic006G224500 Sobic004G193500 Sobic004G193500 Sobic001G471800--Sobic004G193500 Sobic003G183300 Sobic003G183300 Sobic001G471800--Sobic003G183300 Sobic003G255600 Sobic003G255600 Sobic001G471800--Sobic003G255600 Sobic001G360700 Sobic001G360700 Sobic001G471800--Sobic001G360700 Sobic006G031100 Sobic006G031100 Sobic001G471800--Sobic006G031100 Sobic010G093300 Sobic010G093300 Sobic001G471800--Sobic010G093300 Sobic004G047600--Sobic001G360700 Sobic003G352700 Sobic003G352700 Sobic004G047600--Sobic003G352700 Sobic007G047300 Sobic007G047300 Sobic004G047600--Sobic007G047300 Sobic004G047600--Sobic001G471800 Sobic004G047600--Sobic002G146000 Sobic002G167600 Sobic002G167600 Sobic004G047600--Sobic002G167600 Sobic002G254900 Sobic002G254900 Sobic004G047600--Sobic002G254900 Sobic002G203900 Sobic002G203900 Sobic004G047600--Sobic002G203900 Sobic009G162300 Sobic009G162300 Sobic004G047600--Sobic009G162300 Sobic001G301900 Sobic001G301900 Sobic006G278300--Sobic001G301900 Sobic005G052500 Sobic005G052500 Sobic006G278300--Sobic005G052500 Sobic003G269100 Sobic003G269100 Sobic006G278300--Sobic003G269100 Sobic001G314000 Sobic001G314000 Sobic006G278300--Sobic001G314000 Sobic001G484000 Sobic001G484000 Sobic006G278300--Sobic001G484000 Sobic010G261200 Sobic010G261200 Sobic006G278300--Sobic010G261200 Sobic001G295000 Sobic001G295000 Sobic006G278300--Sobic001G295000 Sobic005G110600 Sobic005G110600 Sobic006G278300--Sobic005G110600 Sobic006G278300--Sobic003G082700 Sobic009G106500 Sobic009G106500 Sobic007G176700--Sobic009G106500 Sobic007G186700 Sobic007G186700 Sobic007G176700--Sobic007G186700 Sobic003G045650 Sobic003G045650 Sobic007G176700--Sobic003G045650 Sobic007G176700--Sobic005G112000 Sobic006G229901 Sobic006G229901 Sobic007G176700--Sobic006G229901 Sobic003G023600 Sobic003G023600 Sobic007G176700--Sobic003G023600 Sobic005G069166 Sobic005G069166 Sobic007G176700--Sobic005G069166 Sobic007G202480 Sobic007G202480 Sobic007G176700--Sobic007G202480 Sobic007G212000 Sobic007G212000 Sobic007G176700--Sobic007G212000 Sobic003G082700--Sobic003G352700 Sobic003G239100 Sobic003G239100 Sobic003G082700--Sobic003G239100 Sobic009G008800 Sobic009G008800 Sobic003G082700--Sobic009G008800 Sobic003G082700--Sobic004G047600 Sobic003G082700--Sobic001G484000 Sobic006G160900 Sobic006G160900 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic003G082700--Sobic001G471800 Sobic001G068500 Sobic001G068500 Sobic003G082700--Sobic001G068500 Sobic003G371400 Sobic003G371400 Sobic005G112000--Sobic003G371400 Sobic005G112000--Sobic003G082700 Sobic001G388000 Sobic001G388000 Sobic005G112000--Sobic001G388000 Sobic010G133932 Sobic010G133932 Sobic005G112000--Sobic010G133932 Sobic003G270400 Sobic003G270400 Sobic005G112000--Sobic003G270400 Sobic003G366300 Sobic003G366300 Sobic005G112000--Sobic003G366300 Sobic001G208600 Sobic001G208600 Sobic005G112000--Sobic001G208600 Sobic010G007000 Sobic010G007000 Sobic005G112000--Sobic010G007000 Sobic005G112000--Sobic006G160900 Sobic002G019100 Sobic002G019100 Sobic003G215350--Sobic002G019100 Sobic005G216500 Sobic005G216500 Sobic003G215350--Sobic005G216500 Sobic009G060700 Sobic009G060700 Sobic003G215350--Sobic009G060700 Sobic010G269000 Sobic010G269000 Sobic003G215350--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic003G215350--Sobic004G008600 Sobic002G154700 Sobic002G154700 Sobic003G215350--Sobic002G154700 Sobic005G134200 Sobic005G134200 Sobic003G215350--Sobic005G134200 Sobic005G120900 Sobic005G120900 Sobic003G215350--Sobic005G120900 Sobic006G009700 Sobic006G009700 Sobic003G215350--Sobic006G009700
Octagon: transcription factors


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