Gene annotation
Transcriptome id Sobic.006G278300.3,Sobic.006G278300.5,Sobic.006G278300.2,Sobic.006G278300.4,Sobic.006G278300.1
Synonym Sb06g033910
Functional annotation thaumatin, putative, expressed
UniProt A0A1Z5RFS9 , A0A1Z5RGJ2 , A0A1Z5RFW0 , A0A1B6PPA1
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G77700 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os04g59370.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a045375
Brachypodium PNT62219 , PNT62218 , PNT62217 , PNT62216 , KQJ85471
Barley HORVU6Hr1G024780.1 , HORVU6Hr1G024780.2
Wheat TraesCS6A02G129400 , TraesCS6B02G157700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G301900 ZOS10-07 - C2H2 zinc finger protein, expressed -
2 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
3 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
4 Sobic.001G314000 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
6 Sobic.010G261200 LTPL86 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.001G295000 cyclin, putative, expressed -
8 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
10 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
11 Sobic.006G160900 NAC domain containing protein, putative, expressed -
12 Sobic.001G099600 ankyrin repeat family protein, putative, expressed -
13 Sobic.004G297950 - -
14 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -
15 Sobic.001G514300 Glutathione S-transferase("PubMedID : 26759170,PubMedID : 24597475")@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
17 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
18 Sobic.008G183100 expressed protein -
19 Sobic.008G113900 AGAP002737-PA, putative, expressed -
20 Sobic.008G114000 expressed protein -


Gene co-expression network
sample Sobic006G278300 Sobic006G278300 Sobic001G301900 Sobic001G301900 Sobic006G278300--Sobic001G301900 Sobic005G052500 Sobic005G052500 Sobic006G278300--Sobic005G052500 Sobic003G269100 Sobic003G269100 Sobic006G278300--Sobic003G269100 Sobic001G314000 Sobic001G314000 Sobic006G278300--Sobic001G314000 Sobic001G484000 Sobic001G484000 Sobic006G278300--Sobic001G484000 Sobic010G261200 Sobic010G261200 Sobic006G278300--Sobic010G261200 Sobic001G295000 Sobic001G295000 Sobic006G278300--Sobic001G295000 Sobic005G110600 Sobic005G110600 Sobic006G278300--Sobic005G110600 Sobic003G082700 Sobic003G082700 Sobic006G278300--Sobic003G082700 Sobic003G296500 Sobic003G296500 Sobic001G301900--Sobic003G296500 Sobic010G104400 Sobic010G104400 Sobic001G301900--Sobic010G104400 Sobic010G176800 Sobic010G176800 Sobic001G301900--Sobic010G176800 Sobic001G029800 Sobic001G029800 Sobic001G301900--Sobic001G029800 Sobic007G208100 Sobic007G208100 Sobic001G301900--Sobic007G208100 Sobic004G271500 Sobic004G271500 Sobic001G301900--Sobic004G271500 Sobic001G144200 Sobic001G144200 Sobic001G301900--Sobic001G144200 Sobic001G301900--Sobic001G314000 Sobic005G231300 Sobic005G231300 Sobic001G301900--Sobic005G231300 Sobic005G052500--Sobic001G484000 Sobic001G046800 Sobic001G046800 Sobic005G052500--Sobic001G046800 Sobic005G052500--Sobic003G269100 Sobic010G106700 Sobic010G106700 Sobic005G052500--Sobic010G106700 Sobic010G047600 Sobic010G047600 Sobic005G052500--Sobic010G047600 Sobic003G352700 Sobic003G352700 Sobic005G052500--Sobic003G352700 Sobic004G297950 Sobic004G297950 Sobic005G052500--Sobic004G297950 Sobic002G053900 Sobic002G053900 Sobic005G052500--Sobic002G053900 Sobic003G321400 Sobic003G321400 Sobic005G052500--Sobic003G321400 Sobic003G269100--Sobic003G321400 Sobic001G099600 Sobic001G099600 Sobic003G269100--Sobic001G099600 Sobic003G269100--Sobic004G297950 Sobic003G115200 Sobic003G115200 Sobic003G269100--Sobic003G115200 Sobic003G269100--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic003G269100--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G269100--Sobic001G264400 Sobic003G269100--Sobic001G484000 Sobic003G269100--Sobic001G046800 Sobic003G183300 Sobic003G183300 Sobic001G314000--Sobic003G183300 Sobic009G079900 Sobic009G079900 Sobic001G314000--Sobic009G079900 Sobic001G514300 Sobic001G514300 Sobic001G314000--Sobic001G514300 Sobic003G426200 Sobic003G426200 Sobic001G314000--Sobic003G426200 Sobic007G206800 Sobic007G206800 Sobic001G314000--Sobic007G206800 Sobic002G391400 Sobic002G391400 Sobic001G314000--Sobic002G391400 Sobic005G052700 Sobic005G052700 Sobic001G314000--Sobic005G052700 Sobic002G334000 Sobic002G334000 Sobic001G314000--Sobic002G334000 Sobic006G205700 Sobic006G205700 Sobic001G314000--Sobic006G205700 Sobic001G484000--Sobic005G052500 Sobic001G484000--Sobic001G046800 Sobic001G484000--Sobic003G352700 Sobic001G484000--Sobic002G053900 Sobic001G484000--Sobic003G269100 Sobic001G484000--Sobic003G082700 Sobic002G094600 Sobic002G094600 Sobic001G484000--Sobic002G094600 Sobic009G008800 Sobic009G008800 Sobic001G484000--Sobic009G008800 Sobic003G239100 Sobic003G239100 Sobic001G484000--Sobic003G239100 Sobic002G142200 Sobic002G142200 Sobic010G261200--Sobic002G142200 Sobic010G261200--Sobic001G301900 Sobic003G247600 Sobic003G247600 Sobic010G261200--Sobic003G247600 Sobic010G261200--Sobic001G295000 Sobic010G261200--Sobic006G278300 Sobic006G031400 Sobic006G031400 Sobic010G261200--Sobic006G031400 Sobic004G170900 Sobic004G170900 Sobic010G261200--Sobic004G170900 Sobic007G130900 Sobic007G130900 Sobic010G261200--Sobic007G130900 Sobic006G054600 Sobic006G054600 Sobic010G261200--Sobic006G054600 Sobic006G119000 Sobic006G119000 Sobic001G295000--Sobic006G119000 Sobic003G236600 Sobic003G236600 Sobic001G295000--Sobic003G236600 Sobic006G100501 Sobic006G100501 Sobic001G295000--Sobic006G100501 Sobic003G121100 Sobic003G121100 Sobic001G295000--Sobic003G121100 Sobic006G103300 Sobic006G103300 Sobic001G295000--Sobic006G103300 Sobic005G127400 Sobic005G127400 Sobic001G295000--Sobic005G127400 Sobic006G225500 Sobic006G225500 Sobic001G295000--Sobic006G225500 Sobic003G349400 Sobic003G349400 Sobic001G295000--Sobic003G349400 Sobic009G186500 Sobic009G186500 Sobic001G295000--Sobic009G186500 Sobic005G130700 Sobic005G130700 Sobic005G110600--Sobic005G130700 Sobic006G062300 Sobic006G062300 Sobic005G110600--Sobic006G062300 Sobic005G110600--Sobic004G297950 Sobic001G140800 Sobic001G140800 Sobic005G110600--Sobic001G140800 Sobic003G419600 Sobic003G419600 Sobic005G110600--Sobic003G419600 Sobic010G133932 Sobic010G133932 Sobic005G110600--Sobic010G133932 Sobic010G007000 Sobic010G007000 Sobic005G110600--Sobic010G007000 Sobic005G110600--Sobic003G269100 Sobic005G110600--Sobic001G484000 Sobic003G082700--Sobic003G352700 Sobic003G082700--Sobic003G239100 Sobic003G082700--Sobic009G008800 Sobic004G047600 Sobic004G047600 Sobic003G082700--Sobic004G047600 Sobic003G082700--Sobic001G484000 Sobic006G160900 Sobic006G160900 Sobic003G082700--Sobic006G160900 Sobic003G082700--Sobic003G426200 Sobic001G471800 Sobic001G471800 Sobic003G082700--Sobic001G471800 Sobic001G068500 Sobic001G068500 Sobic003G082700--Sobic001G068500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.