Gene annotation
Transcriptome id Sobic.001G295000.1
Synonym 1, Sb01g028810, CYCP4
Functional annotation cyclin, putative, expressed
UniProt C5WRH3
Pfam PF00134
Panther DB PTHR15615 PTHR15615:SF7
NCBI CDD KOG1674; Cyclin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44740 : cyclin p4;1
RAP-DB (Rice) LOC_Os10g41430.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a032345 , Zm00025a010372 , Zm00025a020917 , Zm00025a003400
Brachypodium PNT69162 , KQK00569 , KQJ83882 , KQJ97834 , KQJ93063
Barley HORVU1Hr1G055470.8 , HORVU1Hr1G055470.4 , HORVU1Hr1G055470.5 , HORVU1Hr1G055470.6 , HORVU1Hr1G055470.7 , HORVU1Hr1G055470.1 , HORVU1Hr1G055470.2 , HORVU1Hr1G055470.3 , HORVU6Hr1G061870.1 , HORVU6Hr1G061870.2 , HORVU6Hr1G061870.3 , HORVU6Hr1G014420.2 , HORVU6Hr1G014420.1
Wheat TraesCS1D02G218800 , TraesCS1A02G217000 , TraesCS6B02G282600 , TraesCS6A02G241800 , TraesCS2D02G389800 , TraesCS2A02G391500 , TraesCS1B02G230100 , TraesCS6D02G223800 , TraesCS6A02G083300 , TraesCS6B02G113800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G119000 X8 domain containing protein, expressed -
2 Sobic.003G236600 expressed protein -
3 Sobic.006G100501 - -
4 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.006G103300 wound/stress protein, putative, expressed -
6 Sobic.005G127400 expressed protein -
7 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.003G349400 expressed protein -
9 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.001G314000 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.003G140700 peroxidase precursor, putative, expressed -
12 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
13 Sobic.009G035900 CHIT10 - Chitinase family protein precursor, expressed -
14 Sobic.003G064800 dirigent, putative, expressed -
15 Sobic.010G241800 - -
16 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.002G255000 AIR12, putative, expressed -
18 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.010G234500 O-methyltransferase, putative, expressed -
20 Sobic.004G110700 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G295000 Sobic001G295000 Sobic006G119000 Sobic006G119000 Sobic001G295000--Sobic006G119000 Sobic003G236600 Sobic003G236600 Sobic001G295000--Sobic003G236600 Sobic006G100501 Sobic006G100501 Sobic001G295000--Sobic006G100501 Sobic003G121100 Sobic003G121100 Sobic001G295000--Sobic003G121100 Sobic006G103300 Sobic006G103300 Sobic001G295000--Sobic006G103300 Sobic005G127400 Sobic005G127400 Sobic001G295000--Sobic005G127400 Sobic006G225500 Sobic006G225500 Sobic001G295000--Sobic006G225500 Sobic003G349400 Sobic003G349400 Sobic001G295000--Sobic003G349400 Sobic009G186500 Sobic009G186500 Sobic001G295000--Sobic009G186500 Sobic006G030200 Sobic006G030200 Sobic006G119000--Sobic006G030200 Sobic006G119000--Sobic001G295000 Sobic003G307400 Sobic003G307400 Sobic006G119000--Sobic003G307400 Sobic003G121000 Sobic003G121000 Sobic006G119000--Sobic003G121000 Sobic001G314000 Sobic001G314000 Sobic006G119000--Sobic001G314000 Sobic006G119000--Sobic003G236600 Sobic001G245800 Sobic001G245800 Sobic006G119000--Sobic001G245800 Sobic001G514300 Sobic001G514300 Sobic006G119000--Sobic001G514300 Sobic008G135300 Sobic008G135300 Sobic006G119000--Sobic008G135300 Sobic008G102800 Sobic008G102800 Sobic003G236600--Sobic008G102800 Sobic006G028500 Sobic006G028500 Sobic003G236600--Sobic006G028500 Sobic003G140700 Sobic003G140700 Sobic003G236600--Sobic003G140700 Sobic009G199001 Sobic009G199001 Sobic003G236600--Sobic009G199001 Sobic004G322100 Sobic004G322100 Sobic003G236600--Sobic004G322100 Sobic001G238000 Sobic001G238000 Sobic003G236600--Sobic001G238000 Sobic002G094600 Sobic002G094600 Sobic003G236600--Sobic002G094600 Sobic004G110700 Sobic004G110700 Sobic003G236600--Sobic004G110700 Sobic004G306900 Sobic004G306900 Sobic003G236600--Sobic004G306900 Sobic006G150100 Sobic006G150100 Sobic006G100501--Sobic006G150100 Sobic002G003700 Sobic002G003700 Sobic006G100501--Sobic002G003700 Sobic004G351200 Sobic004G351200 Sobic006G100501--Sobic004G351200 Sobic006G100501--Sobic003G349400 Sobic006G100501--Sobic009G186500 Sobic002G085800 Sobic002G085800 Sobic006G100501--Sobic002G085800 Sobic006G100501--Sobic005G127400 Sobic010G127800 Sobic010G127800 Sobic006G100501--Sobic010G127800 Sobic006G100501--Sobic006G225500 Sobic002G183700 Sobic002G183700 Sobic003G121100--Sobic002G183700 Sobic003G121100--Sobic004G110700 Sobic003G121100--Sobic006G225500 Sobic003G121100--Sobic003G140700 Sobic003G269600 Sobic003G269600 Sobic003G121100--Sobic003G269600 Sobic003G311800 Sobic003G311800 Sobic003G121100--Sobic003G311800 Sobic006G170600 Sobic006G170600 Sobic003G121100--Sobic006G170600 Sobic003G399600 Sobic003G399600 Sobic003G121100--Sobic003G399600 Sobic006G274933 Sobic006G274933 Sobic003G121100--Sobic006G274933 Sobic006G103300--Sobic005G127400 Sobic006G103300--Sobic006G225500 Sobic006G103300--Sobic009G186500 Sobic003G064800 Sobic003G064800 Sobic006G103300--Sobic003G064800 Sobic006G103300--Sobic003G140700 Sobic010G234500 Sobic010G234500 Sobic006G103300--Sobic010G234500 Sobic007G008600 Sobic007G008600 Sobic006G103300--Sobic007G008600 Sobic006G103300--Sobic004G110700 Sobic010G088800 Sobic010G088800 Sobic006G103300--Sobic010G088800 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic002G255000 Sobic002G255000 Sobic005G127400--Sobic002G255000 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic006G225500--Sobic002G255000 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic006G225500--Sobic002G183700 Sobic006G225500--Sobic003G064800 Sobic006G225500--Sobic007G008600 Sobic003G349400--Sobic005G127400 Sobic003G349400--Sobic010G234500 Sobic002G068000 Sobic002G068000 Sobic003G349400--Sobic002G068000 Sobic003G349400--Sobic006G150100 Sobic003G349400--Sobic002G255000 Sobic003G349400--Sobic003G064800 Sobic010G066800 Sobic010G066800 Sobic003G349400--Sobic010G066800 Sobic003G349400--Sobic004G110700 Sobic007G100700 Sobic007G100700 Sobic003G349400--Sobic007G100700 Sobic009G186500--Sobic006G225500 Sobic009G186500--Sobic002G255000 Sobic001G319300 Sobic001G319300 Sobic009G186500--Sobic001G319300 Sobic009G186500--Sobic005G127400 Sobic009G186500--Sobic010G234500 Sobic009G186500--Sobic003G064800 Sobic009G186500--Sobic003G140700 Sobic001G238200 Sobic001G238200 Sobic009G186500--Sobic001G238200 Sobic009G186500--Sobic003G349400
Octagon: transcription factors


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