Gene annotation
Transcriptome id Sobic.006G172400.1
Synonym Sb06g024760
Functional annotation expressed protein
UniProt C5YDJ1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g46790.1 : expressed protein
MaizeGDB (Corn) Zm00025a010291
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G200600 - -
2 Sobic.002G270600 generative cell specific-1, putative, expressed -
3 Sobic.001G135900 transferase family protein, putative, expressed -
4 Sobic.003G192200 transporter family protein, putative, expressed -
5 Sobic.010G257900 peptidyl-prolyl cis-trans isomerase, putative, expressed -
6 Sobic.003G131900 expressed protein -
7 Sobic.003G444700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
8 Sobic.002G213100 zinc finger, C3HC4 type family protein, expressed -
9 Sobic.008G023801 - -
10 Sobic.005G125200 OsFBX313 - F-box domain containing protein, expressed -
11 Sobic.001G160900 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
12 Sobic.001G125600 - -
13 Sobic.006G130900 - -
14 Sobic.004G338900 P21-Rho-binding domain containing protein, putative, expressed -
15 Sobic.001G120800 - -
16 Sobic.001G433500 expressed protein -
17 Sobic.004G240700 expressed protein -
18 Sobic.003G315600 expressed protein -
19 Sobic.010G056900 - -
20 Sobic.009G118100 vacuolar calcium binding protein, putative, expressed -


Gene co-expression network
sample Sobic006G172400 Sobic006G172400 Sobic004G200600 Sobic004G200600 Sobic006G172400--Sobic004G200600 Sobic002G270600 Sobic002G270600 Sobic006G172400--Sobic002G270600 Sobic001G135900 Sobic001G135900 Sobic006G172400--Sobic001G135900 Sobic003G192200 Sobic003G192200 Sobic006G172400--Sobic003G192200 Sobic010G257900 Sobic010G257900 Sobic006G172400--Sobic010G257900 Sobic003G131900 Sobic003G131900 Sobic006G172400--Sobic003G131900 Sobic003G444700 Sobic003G444700 Sobic006G172400--Sobic003G444700 Sobic002G213100 Sobic002G213100 Sobic006G172400--Sobic002G213100 Sobic008G023801 Sobic008G023801 Sobic006G172400--Sobic008G023801 Sobic004G200600--Sobic006G172400 Sobic010G032200 Sobic010G032200 Sobic004G200600--Sobic010G032200 Sobic010G062600 Sobic010G062600 Sobic004G200600--Sobic010G062600 Sobic004G338900 Sobic004G338900 Sobic004G200600--Sobic004G338900 Sobic009G111700 Sobic009G111700 Sobic004G200600--Sobic009G111700 Sobic010G015100 Sobic010G015100 Sobic004G200600--Sobic010G015100 Sobic006G099200 Sobic006G099200 Sobic004G200600--Sobic006G099200 Sobic004G200600--Sobic010G257900 Sobic002G349800 Sobic002G349800 Sobic004G200600--Sobic002G349800 Sobic010G027400 Sobic010G027400 Sobic002G270600--Sobic010G027400 Sobic002G270600--Sobic001G135900 Sobic003G193600 Sobic003G193600 Sobic002G270600--Sobic003G193600 Sobic002G270600--Sobic002G213100 Sobic004G079600 Sobic004G079600 Sobic002G270600--Sobic004G079600 Sobic005G054501 Sobic005G054501 Sobic002G270600--Sobic005G054501 Sobic009G095640 Sobic009G095640 Sobic002G270600--Sobic009G095640 Sobic007G051200 Sobic007G051200 Sobic002G270600--Sobic007G051200 Sobic004G080600 Sobic004G080600 Sobic002G270600--Sobic004G080600 Sobic001G135900--Sobic002G213100 Sobic001G135900--Sobic003G193600 Sobic001G135900--Sobic004G079600 Sobic001G135900--Sobic009G095640 Sobic005G125200 Sobic005G125200 Sobic001G135900--Sobic005G125200 Sobic001G135900--Sobic003G192200 Sobic002G295600 Sobic002G295600 Sobic001G135900--Sobic002G295600 Sobic001G135900--Sobic005G054501 Sobic001G135900--Sobic007G051200 Sobic003G192200--Sobic003G131900 Sobic003G192200--Sobic003G444700 Sobic003G192200--Sobic010G257900 Sobic001G120800 Sobic001G120800 Sobic003G192200--Sobic001G120800 Sobic010G056900 Sobic010G056900 Sobic003G192200--Sobic010G056900 Sobic001G125600 Sobic001G125600 Sobic003G192200--Sobic001G125600 Sobic002G102600 Sobic002G102600 Sobic003G192200--Sobic002G102600 Sobic006G130900 Sobic006G130900 Sobic003G192200--Sobic006G130900 Sobic001G160900 Sobic001G160900 Sobic003G192200--Sobic001G160900 Sobic010G257900--Sobic001G120800 Sobic010G257900--Sobic003G444700 Sobic010G257900--Sobic006G130900 Sobic010G257900--Sobic010G056900 Sobic010G257900--Sobic003G131900 Sobic007G204800 Sobic007G204800 Sobic010G257900--Sobic007G204800 Sobic010G257900--Sobic003G192200 Sobic010G257900--Sobic002G102600 Sobic010G257900--Sobic001G125600 Sobic003G131900--Sobic003G444700 Sobic003G131900--Sobic003G192200 Sobic003G131900--Sobic010G257900 Sobic003G131900--Sobic010G056900 Sobic003G131900--Sobic002G102600 Sobic003G131900--Sobic001G120800 Sobic005G098100 Sobic005G098100 Sobic003G131900--Sobic005G098100 Sobic003G400700 Sobic003G400700 Sobic003G131900--Sobic003G400700 Sobic001G433500 Sobic001G433500 Sobic003G131900--Sobic001G433500 Sobic003G444700--Sobic003G131900 Sobic003G444700--Sobic010G257900 Sobic003G444700--Sobic003G192200 Sobic003G444700--Sobic001G120800 Sobic003G444700--Sobic010G056900 Sobic003G444700--Sobic006G130900 Sobic003G444700--Sobic002G102600 Sobic003G444700--Sobic005G098100 Sobic003G444700--Sobic001G125600 Sobic002G213100--Sobic001G135900 Sobic002G213100--Sobic003G193600 Sobic002G213100--Sobic009G095640 Sobic002G213100--Sobic004G079600 Sobic002G213100--Sobic005G054501 Sobic002G213100--Sobic002G295600 Sobic002G213100--Sobic007G051200 Sobic002G213100--Sobic005G125200 Sobic006G251100 Sobic006G251100 Sobic002G213100--Sobic006G251100 Sobic008G023801--Sobic010G056900 Sobic008G023801--Sobic003G192200 Sobic008G023801--Sobic003G131900 Sobic008G023801--Sobic003G444700 Sobic008G023801--Sobic010G257900 Sobic008G023801--Sobic002G102600 Sobic008G023801--Sobic005G098100 Sobic008G023801--Sobic001G125600 Sobic008G023801--Sobic001G120800
Octagon: transcription factors


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