Gene annotation
Transcriptome id Sobic.006G174050.1
Synonym -
Functional annotation -
UniProt Q6JAG6 , A0A1Z5RF26
Pfam PF06219
Panther DB PTHR31317 PTHR31317:SF2
NCBI CDD -
KEGG Orthology K12662; PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10020 : Protein of unknown function (DUF1005)
RAP-DB (Rice) LOC_Os01g53790.1 : stress-induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a027660
Brachypodium KQK09649
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G170050 - -
2 Sobic.003G205000 DUF623 domain containing protein, expressed -
3 Sobic.009G158150 - -
4 Sobic.010G266400 - -
5 Sobic.010G166201 - -
6 Sobic.005G168900 expressed protein -
7 Sobic.001G516400 - -
8 Sobic.002G199300 - -
9 Sobic.002G178900 SNARE domain containing protein, putative, expressed K08506: syntaxin of plants SYP7
10 Sobic.001G497400 - -
11 Sobic.009G215100 jacalin-like lectin domain containing protein, expressed -
12 Sobic.006G053601 - -
13 Sobic.004G252300 CCT/B-box zinc finger protein, putative, expressed -
14 Sobic.006G053550 - -
15 Sobic.007G042700 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
16 Sobic.001G443400 conserved hypothetical protein -
17 Sobic.003G129700 - -
18 Sobic.009G025750 - -
19 Sobic.008G129500 - -
20 Sobic.007G045750 - -


Gene co-expression network
sample Sobic006G174050 Sobic006G174050 Sobic009G170050 Sobic009G170050 Sobic006G174050--Sobic009G170050 Sobic003G205000 Sobic003G205000 Sobic006G174050--Sobic003G205000 Sobic009G158150 Sobic009G158150 Sobic006G174050--Sobic009G158150 Sobic010G266400 Sobic010G266400 Sobic006G174050--Sobic010G266400 Sobic010G166201 Sobic010G166201 Sobic006G174050--Sobic010G166201 Sobic005G168900 Sobic005G168900 Sobic006G174050--Sobic005G168900 Sobic001G516400 Sobic001G516400 Sobic006G174050--Sobic001G516400 Sobic002G199300 Sobic002G199300 Sobic006G174050--Sobic002G199300 Sobic002G178900 Sobic002G178900 Sobic006G174050--Sobic002G178900 Sobic009G170050--Sobic005G168900 Sobic009G170050--Sobic006G174050 Sobic009G170050--Sobic002G178900 Sobic009G170050--Sobic009G158150 Sobic003G129700 Sobic003G129700 Sobic009G170050--Sobic003G129700 Sobic006G097600 Sobic006G097600 Sobic009G170050--Sobic006G097600 Sobic007G226900 Sobic007G226900 Sobic009G170050--Sobic007G226900 Sobic009G170050--Sobic001G516400 Sobic002G062400 Sobic002G062400 Sobic009G170050--Sobic002G062400 Sobic009G215100 Sobic009G215100 Sobic003G205000--Sobic009G215100 Sobic006G053550 Sobic006G053550 Sobic003G205000--Sobic006G053550 Sobic003G205000--Sobic002G199300 Sobic002G334700 Sobic002G334700 Sobic003G205000--Sobic002G334700 Sobic004G310350 Sobic004G310350 Sobic003G205000--Sobic004G310350 Sobic003G173200 Sobic003G173200 Sobic003G205000--Sobic003G173200 Sobic001G224500 Sobic001G224500 Sobic003G205000--Sobic001G224500 SobicK031400 SobicK031400 Sobic003G205000--SobicK031400 Sobic002G094100 Sobic002G094100 Sobic003G205000--Sobic002G094100 Sobic009G158150--Sobic003G129700 Sobic007G045750 Sobic007G045750 Sobic009G158150--Sobic007G045750 Sobic001G163500 Sobic001G163500 Sobic009G158150--Sobic001G163500 Sobic009G158150--Sobic002G062400 Sobic009G158150--Sobic010G166201 Sobic009G158150--Sobic001G516400 Sobic004G249950 Sobic004G249950 Sobic009G158150--Sobic004G249950 Sobic009G158150--Sobic005G168900 Sobic001G050650 Sobic001G050650 Sobic009G158150--Sobic001G050650 Sobic007G050650 Sobic007G050650 Sobic010G266400--Sobic007G050650 Sobic010G266400--Sobic002G199300 Sobic001G443400 Sobic001G443400 Sobic010G266400--Sobic001G443400 Sobic005G192350 Sobic005G192350 Sobic010G266400--Sobic005G192350 Sobic010G266400--Sobic003G205000 Sobic010G266400--Sobic006G174050 Sobic007G020400 Sobic007G020400 Sobic010G266400--Sobic007G020400 Sobic010G266400--Sobic002G334700 Sobic010G064300 Sobic010G064300 Sobic010G266400--Sobic010G064300 Sobic002G073000 Sobic002G073000 Sobic010G166201--Sobic002G073000 Sobic010G166201--Sobic009G158150 Sobic010G259800 Sobic010G259800 Sobic010G166201--Sobic010G259800 Sobic010G166201--Sobic001G050650 Sobic010G166201--Sobic001G443400 Sobic006G053601 Sobic006G053601 Sobic010G166201--Sobic006G053601 Sobic010G098800 Sobic010G098800 Sobic010G166201--Sobic010G098800 Sobic010G166201--Sobic001G516400 Sobic010G166201--Sobic007G045750 Sobic005G168900--Sobic009G170050 Sobic005G168900--Sobic002G062400 Sobic005G168900--Sobic001G516400 Sobic005G168900--Sobic002G178900 Sobic005G168900--Sobic009G158150 Sobic005G168900--Sobic003G129700 Sobic005G168900--Sobic007G045750 Sobic005G168900--Sobic006G174050 Sobic005G168900--Sobic007G226900 Sobic001G516400--Sobic009G158150 Sobic001G516400--Sobic010G166201 Sobic001G516400--Sobic002G178900 Sobic001G516400--Sobic005G168900 Sobic001G516400--Sobic007G045750 Sobic001G516400--Sobic006G053601 Sobic001G516400--Sobic010G098800 Sobic001G516400--Sobic003G129700 Sobic001G516400--Sobic006G174050 Sobic002G199300--Sobic003G205000 Sobic002G199300--Sobic002G334700 Sobic002G199300--Sobic010G266400 Sobic002G199300--Sobic009G215100 Sobic002G199300--Sobic006G053550 Sobic002G199300--Sobic001G443400 Sobic002G199300--Sobic006G174050 Sobic002G199300--Sobic005G192350 Sobic002G199300--Sobic010G166201 Sobic002G178900--Sobic009G170050 Sobic002G178900--Sobic001G516400 Sobic002G178900--Sobic005G168900 Sobic002G178900--Sobic007G226900 Sobic001G471050 Sobic001G471050 Sobic002G178900--Sobic001G471050 Sobic002G178900--Sobic003G129700 Sobic002G178900--Sobic009G158150 Sobic002G178900--Sobic006G097600 Sobic009G145200 Sobic009G145200 Sobic002G178900--Sobic009G145200
Octagon: transcription factors


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