Gene annotation
Transcriptome id Sobic.006G211300.1
Synonym 1, Sb06g028180, VSR3, VSR7, BP80-3
Functional annotation vacuolar-sorting receptor precursor, putative, expressed
UniProt A0A1B6PMW7
Pfam PF02225
Panther DB PTHR22765 PTHR22765:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G20110 : VACUOLAR SORTING RECEPTOR 7
RAP-DB (Rice) LOC_Os04g52190.1 : vacuolar-sorting receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051737
Brachypodium KQJ84517 , KQJ92548 , KQK16993 , PNT61823
Barley HORVU2Hr1G099640.4 , HORVU2Hr1G099640.5 , HORVU2Hr1G099640.6 , HORVU2Hr1G099640.7 , HORVU2Hr1G099640.2 , HORVU2Hr1G099640.3 , HORVU2Hr1G017770.3 , HORVU2Hr1G017770.1 , HORVU2Hr1G017770.4 , HORVU2Hr1G017770.5 , HORVU2Hr1G017770.8 , HORVU2Hr1G017770.9 , HORVU7Hr1G109180.1 , HORVU7Hr1G109180.2 , HORVU7Hr1G109180.3 , HORVU7Hr1G109180.4 , HORVU5Hr1G046490.6 , HORVU5Hr1G046490.4 , HORVU5Hr1G046490.5 , HORVU5Hr1G046490.2 , HORVU5Hr1G046490.3 , HORVU2Hr1G017770.11 , HORVU2Hr1G017770.14 , HORVU2Hr1G017770.15 , HORVU2Hr1G017770.16 , HORVU2Hr1G017770.17 , HORVU2Hr1G017770.19
Wheat TraesCS2D02G105100 , TraesCS2D02G423700 , TraesCS2A02G105500 , TraesCS7D02G471300 , TraesCS7D02G145700 , TraesCS7D02G145700 , TraesCS7D02G145700 , TraesCS7D02G145700 , TraesCS5D02G145500 , TraesCS5D02G145500 , TraesCS7B02G387100 , TraesCS2B02G122400 , TraesCS2B02G446100 , TraesCS2A02G425800 , TraesCS2A02G425800 , TraesCS7A02G483700 , TraesCS5A02G146800 , TraesCS5A02G146800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G272000 expressed protein -
2 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
3 Sobic.005G031400 embryogenesis transmembrane protein, putative, expressed -
4 Sobic.009G074800 - -
5 Sobic.001G485901 - -
6 Sobic.003G219300 leaf senescence related protein, putative, expressed -
7 Sobic.010G100700 HEAT repeat family protein, putative, expressed -
8 Sobic.008G072800 OsMADS33 - MADS-box family gene with MIKCc type-box, expressed -
9 Sobic.006G136300 - -
10 Sobic.009G026700 expressed protein -
11 Sobic.003G336550 - -
12 Sobic.004G030850 - -
13 Sobic.001G352633 - -
14 Sobic.002G413700 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
15 Sobic.001G460900 expressed protein -
16 Sobic.004G160750 - -
17 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -
18 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
19 Sobic.006G021100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate peroxidase (Os)(PubMedID : 27208977)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsAPx3 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
20 Sobic.003G358800 tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G211300 Sobic006G211300 Sobic003G272000 Sobic003G272000 Sobic006G211300--Sobic003G272000 Sobic008G190600 Sobic008G190600 Sobic006G211300--Sobic008G190600 Sobic005G031400 Sobic005G031400 Sobic006G211300--Sobic005G031400 Sobic009G074800 Sobic009G074800 Sobic006G211300--Sobic009G074800 Sobic001G485901 Sobic001G485901 Sobic006G211300--Sobic001G485901 Sobic003G219300 Sobic003G219300 Sobic006G211300--Sobic003G219300 Sobic010G100700 Sobic010G100700 Sobic006G211300--Sobic010G100700 Sobic008G072800 Sobic008G072800 Sobic006G211300--Sobic008G072800 Sobic006G136300 Sobic006G136300 Sobic006G211300--Sobic006G136300 Sobic003G272000--Sobic003G219300 Sobic007G182300 Sobic007G182300 Sobic003G272000--Sobic007G182300 Sobic003G272000--Sobic009G074800 Sobic001G250750 Sobic001G250750 Sobic003G272000--Sobic001G250750 Sobic004G160750 Sobic004G160750 Sobic003G272000--Sobic004G160750 Sobic006G111000 Sobic006G111000 Sobic003G272000--Sobic006G111000 Sobic001G352633 Sobic001G352633 Sobic003G272000--Sobic001G352633 Sobic004G180950 Sobic004G180950 Sobic003G272000--Sobic004G180950 Sobic008G132500 Sobic008G132500 Sobic003G272000--Sobic008G132500 Sobic008G190600--Sobic009G074800 Sobic001G191500 Sobic001G191500 Sobic008G190600--Sobic001G191500 Sobic008G190600--Sobic005G031400 Sobic008G142200 Sobic008G142200 Sobic008G190600--Sobic008G142200 Sobic008G170800 Sobic008G170800 Sobic008G190600--Sobic008G170800 Sobic006G157450 Sobic006G157450 Sobic008G190600--Sobic006G157450 Sobic008G190600--Sobic003G219300 Sobic001G460900 Sobic001G460900 Sobic008G190600--Sobic001G460900 Sobic002G226200 Sobic002G226200 Sobic008G190600--Sobic002G226200 Sobic005G031400--Sobic008G190600 Sobic006G213350 Sobic006G213350 Sobic005G031400--Sobic006G213350 Sobic001G483001 Sobic001G483001 Sobic005G031400--Sobic001G483001 Sobic010G012200 Sobic010G012200 Sobic005G031400--Sobic010G012200 Sobic005G031400--Sobic008G142200 Sobic005G031400--Sobic006G157450 Sobic001G520000 Sobic001G520000 Sobic005G031400--Sobic001G520000 Sobic004G315400 Sobic004G315400 Sobic005G031400--Sobic004G315400 Sobic005G031400--Sobic008G170800 Sobic009G074800--Sobic008G190600 Sobic009G026700 Sobic009G026700 Sobic009G074800--Sobic009G026700 Sobic004G033650 Sobic004G033650 Sobic009G074800--Sobic004G033650 Sobic008G083100 Sobic008G083100 Sobic009G074800--Sobic008G083100 Sobic009G074800--Sobic003G272000 Sobic006G072701 Sobic006G072701 Sobic009G074800--Sobic006G072701 Sobic009G074800--Sobic001G250750 Sobic001G001800 Sobic001G001800 Sobic009G074800--Sobic001G001800 Sobic003G375500 Sobic003G375500 Sobic009G074800--Sobic003G375500 Sobic003G336550 Sobic003G336550 Sobic001G485901--Sobic003G336550 Sobic007G108600 Sobic007G108600 Sobic001G485901--Sobic007G108600 Sobic004G030850 Sobic004G030850 Sobic001G485901--Sobic004G030850 Sobic003G313600 Sobic003G313600 Sobic001G485901--Sobic003G313600 Sobic003G253100 Sobic003G253100 Sobic001G485901--Sobic003G253100 Sobic004G118000 Sobic004G118000 Sobic001G485901--Sobic004G118000 Sobic008G113200 Sobic008G113200 Sobic001G485901--Sobic008G113200 Sobic001G485901--Sobic009G026700 Sobic004G255550 Sobic004G255550 Sobic001G485901--Sobic004G255550 Sobic003G219300--Sobic003G272000 Sobic006G041200 Sobic006G041200 Sobic003G219300--Sobic006G041200 Sobic003G219300--Sobic008G132500 Sobic003G219300--Sobic001G250750 Sobic003G219300--Sobic007G182300 Sobic002G200400 Sobic002G200400 Sobic003G219300--Sobic002G200400 Sobic003G219300--Sobic002G226200 Sobic010G235100 Sobic010G235100 Sobic003G219300--Sobic010G235100 Sobic003G219300--Sobic006G072701 Sobic004G093700 Sobic004G093700 Sobic010G100700--Sobic004G093700 Sobic010G100700--Sobic008G072800 Sobic003G023450 Sobic003G023450 Sobic010G100700--Sobic003G023450 Sobic007G141900 Sobic007G141900 Sobic010G100700--Sobic007G141900 Sobic010G100700--Sobic008G142200 Sobic003G063400 Sobic003G063400 Sobic010G100700--Sobic003G063400 Sobic002G324801 Sobic002G324801 Sobic010G100700--Sobic002G324801 Sobic002G012100 Sobic002G012100 Sobic010G100700--Sobic002G012100 Sobic010G100700--Sobic008G132500 Sobic008G072800--Sobic007G141900 Sobic008G072800--Sobic010G100700 Sobic008G072800--Sobic008G142200 Sobic008G072800--Sobic006G072701 Sobic008G072800--Sobic002G012100 Sobic008G072800--Sobic003G023450 Sobic008G072800--Sobic002G324801 Sobic008G072800--Sobic008G132500 Sobic008G072800--Sobic001G191500 Sobic006G221500 Sobic006G221500 Sobic006G136300--Sobic006G221500 Sobic001G052700 Sobic001G052700 Sobic006G136300--Sobic001G052700 Sobic006G136300--Sobic004G315400 Sobic004G267400 Sobic004G267400 Sobic006G136300--Sobic004G267400 Sobic006G136300--Sobic005G031400 Sobic002G374000 Sobic002G374000 Sobic006G136300--Sobic002G374000 Sobic006G235801 Sobic006G235801 Sobic006G136300--Sobic006G235801 Sobic006G136300--Sobic006G213350 Sobic009G173700 Sobic009G173700 Sobic006G136300--Sobic009G173700
Octagon: transcription factors


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