Gene annotation
Transcriptome id Sobic.006G218400.1
Synonym Sb06g028810
Functional annotation OsFBK15 - F-box domain and kelch repeat containing protein, expressed
UniProt A0A1B6PN81
Pfam PF01344
Panther DB PTHR24413 PTHR24413:SF123
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G60570 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os04g52830.1 : OsFBK15 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a057047 , Zm00025a009746 , Zm00025a046175
Brachypodium KQJ84641 , KQJ84642
Barley HORVU2Hr1G103880.6 , HORVU2Hr1G103880.7 , HORVU2Hr1G103880.4 , HORVU2Hr1G103880.5 , HORVU2Hr1G103880.2 , HORVU2Hr1G103880.3 , HORVU2Hr1G103880.1 , HORVU2Hr1G103880.8 , HORVU2Hr1G103880.9 , HORVU2Hr1G103880.10
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
2 Sobic.006G245600 protein kinase domain containing protein, expressed -
3 Sobic.008G039800 rhoGAP domain containing protein, expressed -
4 Sobic.010G216600 expressed protein -
5 Sobic.009G248900 expressed protein -
6 Sobic.006G207400 expressed protein -
7 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
8 Sobic.003G419700 classical arabinogalactan protein 26 precursor, putative, expressed -
9 Sobic.010G111200 "GASR7(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659934)@GASR7 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
10 Sobic.002G142500 expressed protein -
11 Sobic.003G013000 inactive receptor kinase At2g26730 precursor, putative, expressed -
12 Sobic.001G231200 expressed protein -
13 Sobic.004G309800 remorin C-terminal domain containing protein, putative, expressed -
14 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
15 Sobic.001G285200 protein transport protein-related, putative, expressed -
16 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.003G230000 serine/threonine-protein kinase, putative, expressed -
18 Sobic.009G242501 - -
19 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
20 Sobic.008G093600 expressed protein -


Gene co-expression network
sample Sobic006G218400 Sobic006G218400 Sobic003G277200 Sobic003G277200 Sobic006G218400--Sobic003G277200 Sobic006G245600 Sobic006G245600 Sobic006G218400--Sobic006G245600 Sobic008G039800 Sobic008G039800 Sobic006G218400--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic006G218400--Sobic010G216600 Sobic009G248900 Sobic009G248900 Sobic006G218400--Sobic009G248900 Sobic006G207400 Sobic006G207400 Sobic006G218400--Sobic006G207400 Sobic002G419200 Sobic002G419200 Sobic006G218400--Sobic002G419200 Sobic003G419700 Sobic003G419700 Sobic006G218400--Sobic003G419700 Sobic010G111200 Sobic010G111200 Sobic006G218400--Sobic010G111200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic003G277200--Sobic008G039800 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic001G285200 Sobic001G285200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic001G037400 Sobic001G037400 Sobic003G277200--Sobic001G037400 Sobic007G130900 Sobic007G130900 Sobic006G245600--Sobic007G130900 Sobic004G170900 Sobic004G170900 Sobic006G245600--Sobic004G170900 Sobic005G047100 Sobic005G047100 Sobic006G245600--Sobic005G047100 Sobic005G130700 Sobic005G130700 Sobic006G245600--Sobic005G130700 Sobic005G110600 Sobic005G110600 Sobic006G245600--Sobic005G110600 Sobic006G245600--Sobic003G277200 Sobic004G297950 Sobic004G297950 Sobic006G245600--Sobic004G297950 Sobic006G245600--Sobic008G039800 Sobic006G245600--Sobic006G218400 Sobic008G039800--Sobic003G277200 Sobic008G039800--Sobic001G037400 Sobic009G242501 Sobic009G242501 Sobic008G039800--Sobic009G242501 Sobic008G039800--Sobic001G285200 Sobic008G039800--Sobic010G216600 Sobic009G211800 Sobic009G211800 Sobic008G039800--Sobic009G211800 Sobic008G096200 Sobic008G096200 Sobic008G039800--Sobic008G096200 Sobic003G013000 Sobic003G013000 Sobic008G039800--Sobic003G013000 Sobic001G196000 Sobic001G196000 Sobic008G039800--Sobic001G196000 Sobic010G216600--Sobic003G338200 Sobic010G216600--Sobic004G170900 Sobic007G225400 Sobic007G225400 Sobic010G216600--Sobic007G225400 Sobic010G216600--Sobic010G111200 Sobic010G216600--Sobic002G419200 Sobic010G216600--Sobic003G277200 Sobic002G016400 Sobic002G016400 Sobic010G216600--Sobic002G016400 Sobic010G216600--Sobic003G116100 Sobic001G382700 Sobic001G382700 Sobic010G216600--Sobic001G382700 Sobic009G248900--Sobic002G419200 Sobic009G248900--Sobic003G277200 Sobic009G235700 Sobic009G235700 Sobic009G248900--Sobic009G235700 Sobic003G360700 Sobic003G360700 Sobic009G248900--Sobic003G360700 Sobic001G113800 Sobic001G113800 Sobic009G248900--Sobic001G113800 Sobic010G010900 Sobic010G010900 Sobic009G248900--Sobic010G010900 Sobic004G259101 Sobic004G259101 Sobic009G248900--Sobic004G259101 Sobic003G420800 Sobic003G420800 Sobic009G248900--Sobic003G420800 Sobic007G210900 Sobic007G210900 Sobic009G248900--Sobic007G210900 Sobic004G309800 Sobic004G309800 Sobic006G207400--Sobic004G309800 Sobic001G231200 Sobic001G231200 Sobic006G207400--Sobic001G231200 Sobic006G207400--Sobic008G096200 Sobic007G094400 Sobic007G094400 Sobic006G207400--Sobic007G094400 Sobic001G261549 Sobic001G261549 Sobic006G207400--Sobic001G261549 Sobic003G230000 Sobic003G230000 Sobic006G207400--Sobic003G230000 Sobic001G487200 Sobic001G487200 Sobic006G207400--Sobic001G487200 Sobic001G108400 Sobic001G108400 Sobic006G207400--Sobic001G108400 Sobic007G166800 Sobic007G166800 Sobic006G207400--Sobic007G166800 Sobic003G300400 Sobic003G300400 Sobic002G419200--Sobic003G300400 Sobic002G419200--Sobic003G338200 Sobic002G419200--Sobic003G116100 Sobic003G309400 Sobic003G309400 Sobic002G419200--Sobic003G309400 Sobic002G419200--Sobic003G277200 Sobic002G419200--Sobic001G285200 Sobic002G032500 Sobic002G032500 Sobic002G419200--Sobic002G032500 Sobic004G248100 Sobic004G248100 Sobic002G419200--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic002G419200--Sobic003G339600 Sobic001G522300 Sobic001G522300 Sobic003G419700--Sobic001G522300 Sobic003G419700--Sobic003G338200 Sobic003G419700--Sobic010G111200 Sobic010G181500 Sobic010G181500 Sobic003G419700--Sobic010G181500 Sobic003G419700--Sobic010G216600 Sobic001G074000 Sobic001G074000 Sobic003G419700--Sobic001G074000 Sobic004G313200 Sobic004G313200 Sobic003G419700--Sobic004G313200 Sobic003G419700--Sobic003G013000 Sobic003G419700--Sobic004G248100 Sobic001G299600 Sobic001G299600 Sobic010G111200--Sobic001G299600 Sobic010G111200--Sobic010G216600 Sobic001G540900 Sobic001G540900 Sobic010G111200--Sobic001G540900 Sobic010G111200--Sobic004G313200 Sobic002G222500 Sobic002G222500 Sobic010G111200--Sobic002G222500 Sobic002G426800 Sobic002G426800 Sobic010G111200--Sobic002G426800 Sobic003G260700 Sobic003G260700 Sobic010G111200--Sobic003G260700 Sobic003G328500 Sobic003G328500 Sobic010G111200--Sobic003G328500 Sobic002G394500 Sobic002G394500 Sobic010G111200--Sobic002G394500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.