Gene annotation
Transcriptome id Sobic.006G241950.1
Synonym -
Functional annotation -
UniProt A0A1Z5RGA1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G259600 no apical meristem protein, putative, expressed -
2 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
3 Sobic.006G242000 oryzain beta chain precursor, putative, expressed -
4 Sobic.007G135000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
5 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
6 Sobic.009G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.001G340700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@EARLY flowering protein, putative, expressed -
8 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
9 Sobic.002G225600 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
10 Sobic.004G340700 OsFBX70 - F-box domain containing protein, expressed -
11 Sobic.006G246200 protein kinase, putative, expressed -
12 Sobic.009G241300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -
14 Sobic.003G361900 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
15 Sobic.005G133166 - -
16 Sobic.001G362001 Probable serine/threonineprotein kinase PBL15(PubMedID : 31721651) -
17 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
18 Sobic.002G269032 - -
19 Sobic.002G217200 oryzain gamma chain precursor, putative, expressed K01366: cathepsin H
20 Sobic.009G241500 expressed protein -


Gene co-expression network
sample Sobic006G241950 Sobic006G241950 Sobic002G259600 Sobic002G259600 Sobic006G241950--Sobic002G259600 Sobic006G168000 Sobic006G168000 Sobic006G241950--Sobic006G168000 Sobic006G242000 Sobic006G242000 Sobic006G241950--Sobic006G242000 Sobic007G135000 Sobic007G135000 Sobic006G241950--Sobic007G135000 Sobic003G097100 Sobic003G097100 Sobic006G241950--Sobic003G097100 Sobic009G241400 Sobic009G241400 Sobic006G241950--Sobic009G241400 Sobic001G340700 Sobic001G340700 Sobic006G241950--Sobic001G340700 Sobic003G138400 Sobic003G138400 Sobic006G241950--Sobic003G138400 Sobic002G225600 Sobic002G225600 Sobic006G241950--Sobic002G225600 Sobic002G259600--Sobic006G242000 Sobic010G194300 Sobic010G194300 Sobic002G259600--Sobic010G194300 Sobic002G130700 Sobic002G130700 Sobic002G259600--Sobic002G130700 Sobic002G259600--Sobic006G241950 Sobic002G259600--Sobic003G097100 Sobic004G293000 Sobic004G293000 Sobic002G259600--Sobic004G293000 Sobic003G248400 Sobic003G248400 Sobic002G259600--Sobic003G248400 Sobic001G195100 Sobic001G195100 Sobic002G259600--Sobic001G195100 Sobic004G174100 Sobic004G174100 Sobic002G259600--Sobic004G174100 Sobic006G246200 Sobic006G246200 Sobic006G168000--Sobic006G246200 Sobic009G241500 Sobic009G241500 Sobic006G168000--Sobic009G241500 Sobic005G082700 Sobic005G082700 Sobic006G168000--Sobic005G082700 Sobic004G220600 Sobic004G220600 Sobic006G168000--Sobic004G220600 Sobic005G133166 Sobic005G133166 Sobic006G168000--Sobic005G133166 Sobic008G181801 Sobic008G181801 Sobic006G168000--Sobic008G181801 Sobic010G210700 Sobic010G210700 Sobic006G168000--Sobic010G210700 Sobic001G136300 Sobic001G136300 Sobic006G168000--Sobic001G136300 Sobic006G168000--Sobic009G241400 Sobic006G242000--Sobic003G097100 Sobic006G028100 Sobic006G028100 Sobic006G242000--Sobic006G028100 Sobic002G217200 Sobic002G217200 Sobic006G242000--Sobic002G217200 Sobic006G242000--Sobic004G174100 Sobic006G242000--Sobic007G135000 Sobic006G242000--Sobic002G130700 Sobic003G022600 Sobic003G022600 Sobic006G242000--Sobic003G022600 Sobic005G064800 Sobic005G064800 Sobic006G242000--Sobic005G064800 Sobic001G320200 Sobic001G320200 Sobic006G242000--Sobic001G320200 Sobic007G135000--Sobic003G097100 Sobic009G241300 Sobic009G241300 Sobic007G135000--Sobic009G241300 Sobic001G469500 Sobic001G469500 Sobic007G135000--Sobic001G469500 Sobic007G135000--Sobic003G022600 Sobic003G039700 Sobic003G039700 Sobic007G135000--Sobic003G039700 Sobic007G135000--Sobic009G241400 Sobic003G363100 Sobic003G363100 Sobic007G135000--Sobic003G363100 Sobic007G135000--Sobic006G242000 Sobic010G192800 Sobic010G192800 Sobic007G135000--Sobic010G192800 Sobic003G097100--Sobic007G135000 Sobic003G097100--Sobic006G242000 Sobic003G097100--Sobic009G241300 Sobic003G097100--Sobic006G028100 Sobic003G097100--Sobic001G320200 Sobic003G097100--Sobic009G241400 Sobic003G097100--Sobic003G022600 Sobic003G097100--Sobic001G469500 Sobic003G097100--Sobic002G130700 Sobic009G241400--Sobic009G241300 Sobic009G241400--Sobic006G168000 Sobic008G162201 Sobic008G162201 Sobic009G241400--Sobic008G162201 Sobic009G241400--Sobic001G136300 Sobic009G241400--Sobic007G135000 Sobic009G241400--Sobic005G082700 Sobic009G241400--Sobic006G246200 Sobic009G241400--Sobic009G241500 Sobic009G241400--Sobic005G133166 Sobic001G340700--Sobic005G133166 Sobic009G255100 Sobic009G255100 Sobic001G340700--Sobic009G255100 Sobic001G145050 Sobic001G145050 Sobic001G340700--Sobic001G145050 Sobic008G111300 Sobic008G111300 Sobic001G340700--Sobic008G111300 Sobic005G045200 Sobic005G045200 Sobic001G340700--Sobic005G045200 Sobic001G340700--Sobic006G168000 Sobic008G085350 Sobic008G085350 Sobic001G340700--Sobic008G085350 Sobic001G233200 Sobic001G233200 Sobic001G340700--Sobic001G233200 Sobic002G271600 Sobic002G271600 Sobic001G340700--Sobic002G271600 Sobic010G273700 Sobic010G273700 Sobic003G138400--Sobic010G273700 Sobic003G138400--Sobic004G220600 Sobic004G006500 Sobic004G006500 Sobic003G138400--Sobic004G006500 Sobic001G339600 Sobic001G339600 Sobic003G138400--Sobic001G339600 Sobic009G227800 Sobic009G227800 Sobic003G138400--Sobic009G227800 Sobic004G169900 Sobic004G169900 Sobic003G138400--Sobic004G169900 Sobic004G092000 Sobic004G092000 Sobic003G138400--Sobic004G092000 Sobic002G216500 Sobic002G216500 Sobic003G138400--Sobic002G216500 Sobic009G010400 Sobic009G010400 Sobic003G138400--Sobic009G010400 Sobic001G259500 Sobic001G259500 Sobic002G225600--Sobic001G259500 Sobic001G362001 Sobic001G362001 Sobic002G225600--Sobic001G362001 Sobic007G089300 Sobic007G089300 Sobic002G225600--Sobic007G089300 Sobic002G225600--Sobic009G241500 Sobic003G037100 Sobic003G037100 Sobic002G225600--Sobic003G037100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.