Gene annotation
Transcriptome id Sobic.002G217200.1
Synonym SAG2, Sb02g025920, ALP, AALP
Functional annotation oryzain gamma chain precursor, putative, expressed
UniProt C5XDR4
Pfam PF08246 PF00112
Panther DB PTHR12411
NCBI CDD KOG1543; Cysteine proteinase Cathepsin L
KEGG Orthology K01366; cathepsin H
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT3G45310 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os09g27030.2 : oryzain gamma chain precursor, putative, expressed
MaizeGDB (Corn) Zm00025a014014 , Zm00025a047169
Brachypodium KQJ90423 , KQJ90422 , KQJ90424
Barley HORVU5Hr1G061770.4 , HORVU5Hr1G061770.1 , HORVU5Hr1G061770.2 , HORVU5Hr1G061770.3 , HORVU3Hr1G039880.11 , HORVU3Hr1G039880.10 , HORVU3Hr1G039880.13 , HORVU3Hr1G039880.12 , HORVU3Hr1G039880.9 , HORVU3Hr1G039880.8 , HORVU3Hr1G039880.5 , HORVU3Hr1G039880.4 , HORVU3Hr1G039880.7 , HORVU3Hr1G039880.3 , HORVU3Hr1G039880.2
Wheat TraesCS5D02G216300 , TraesCS4B02G003900 , TraesCS5A02G210100 , TraesCS5B02G208100 , TraesCS4D02G004400 , TraesCS4A02G309300
Populus PNT31639 , PNT31634 , PNT31640


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cDNA sequences
Sobic.002G217200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G142800 similar to Cysteine proteinase 1 precursor(PubMedID : 29862293)@"As a homologous gene of the drought stress-responsive gene RD19 of Arabidopsis, SbRD19 overexpression in Arabidopsis improved the drought tolerance of plants relative to wild-type plants."(PubMedID : 32112957)@cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
2 Sobic.006G024500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
3 Sobic.006G242000 oryzain beta chain precursor, putative, expressed -
4 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
5 Sobic.001G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
6 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
7 Sobic.009G062800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
8 Sobic.002G181300 expressed protein -
9 Sobic.010G000600 BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed -
10 Sobic.005G064800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
11 Sobic.010G039200 cysteine synthase, putative, expressed K01738: cysteine synthase
12 Sobic.004G068800 cytochrome P450 71D10, putative, expressed -
13 Sobic.001G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase
14 Sobic.001G207200 MEE12, putative, expressed -
15 Sobic.002G315800 Papain family cysteine protease domain containing protein, expressed K01363: cathepsin B
16 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
17 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
18 Sobic.007G110200 wound responsive protein, putative, expressed -
19 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.001G367500 arginyl-tRNA synthetase, putative, expressed -


Gene co-expression network
sample Sobic002G217200 Sobic002G217200 Sobic004G142800 Sobic004G142800 Sobic002G217200--Sobic004G142800 Sobic006G024500 Sobic006G024500 Sobic002G217200--Sobic006G024500 Sobic006G242000 Sobic006G242000 Sobic002G217200--Sobic006G242000 Sobic004G131040 Sobic004G131040 Sobic002G217200--Sobic004G131040 Sobic001G275500 Sobic001G275500 Sobic002G217200--Sobic001G275500 Sobic009G213800 Sobic009G213800 Sobic002G217200--Sobic009G213800 Sobic009G062800 Sobic009G062800 Sobic002G217200--Sobic009G062800 Sobic002G181300 Sobic002G181300 Sobic002G217200--Sobic002G181300 Sobic010G000600 Sobic010G000600 Sobic002G217200--Sobic010G000600 Sobic004G142800--Sobic006G024500 Sobic004G142800--Sobic002G217200 Sobic004G142800--Sobic009G213800 Sobic007G073700 Sobic007G073700 Sobic004G142800--Sobic007G073700 Sobic005G064800 Sobic005G064800 Sobic004G142800--Sobic005G064800 Sobic006G201100 Sobic006G201100 Sobic004G142800--Sobic006G201100 Sobic004G142800--Sobic004G131040 Sobic010G231100 Sobic010G231100 Sobic004G142800--Sobic010G231100 Sobic010G208700 Sobic010G208700 Sobic004G142800--Sobic010G208700 Sobic005G028900 Sobic005G028900 Sobic006G024500--Sobic005G028900 Sobic006G024500--Sobic004G142800 Sobic009G036300 Sobic009G036300 Sobic006G024500--Sobic009G036300 Sobic003G125400 Sobic003G125400 Sobic006G024500--Sobic003G125400 Sobic006G024500--Sobic010G231100 Sobic001G450600 Sobic001G450600 Sobic006G024500--Sobic001G450600 Sobic006G024500--Sobic009G213800 Sobic007G227600 Sobic007G227600 Sobic006G024500--Sobic007G227600 Sobic003G103200 Sobic003G103200 Sobic006G024500--Sobic003G103200 Sobic003G097100 Sobic003G097100 Sobic006G242000--Sobic003G097100 Sobic006G028100 Sobic006G028100 Sobic006G242000--Sobic006G028100 Sobic006G242000--Sobic002G217200 Sobic004G174100 Sobic004G174100 Sobic006G242000--Sobic004G174100 Sobic007G135000 Sobic007G135000 Sobic006G242000--Sobic007G135000 Sobic002G130700 Sobic002G130700 Sobic006G242000--Sobic002G130700 Sobic003G022600 Sobic003G022600 Sobic006G242000--Sobic003G022600 Sobic006G242000--Sobic005G064800 Sobic001G320200 Sobic001G320200 Sobic006G242000--Sobic001G320200 Sobic004G131040--Sobic010G000600 Sobic004G265800 Sobic004G265800 Sobic004G131040--Sobic004G265800 Sobic004G131040--Sobic002G181300 Sobic001G146800 Sobic001G146800 Sobic004G131040--Sobic001G146800 Sobic002G315800 Sobic002G315800 Sobic004G131040--Sobic002G315800 Sobic006G030600 Sobic006G030600 Sobic004G131040--Sobic006G030600 Sobic007G004500 Sobic007G004500 Sobic004G131040--Sobic007G004500 Sobic002G193100 Sobic002G193100 Sobic004G131040--Sobic002G193100 Sobic003G110000 Sobic003G110000 Sobic004G131040--Sobic003G110000 Sobic001G275500--Sobic009G213800 Sobic006G060601 Sobic006G060601 Sobic001G275500--Sobic006G060601 Sobic009G019100 Sobic009G019100 Sobic001G275500--Sobic009G019100 Sobic003G359500 Sobic003G359500 Sobic001G275500--Sobic003G359500 Sobic001G275500--Sobic002G217200 Sobic002G072100 Sobic002G072100 Sobic001G275500--Sobic002G072100 Sobic001G275500--Sobic006G030600 Sobic001G029200 Sobic001G029200 Sobic001G275500--Sobic001G029200 Sobic007G084300 Sobic007G084300 Sobic001G275500--Sobic007G084300 Sobic009G213800--Sobic009G019100 Sobic009G213800--Sobic001G275500 Sobic009G213800--Sobic006G060601 Sobic009G213800--Sobic001G029200 Sobic010G035500 Sobic010G035500 Sobic009G213800--Sobic010G035500 Sobic009G213800--Sobic003G359500 Sobic009G213800--Sobic006G201100 Sobic002G046900 Sobic002G046900 Sobic009G213800--Sobic002G046900 Sobic004G300000 Sobic004G300000 Sobic009G213800--Sobic004G300000 Sobic010G074100 Sobic010G074100 Sobic009G062800--Sobic010G074100 Sobic010G074200 Sobic010G074200 Sobic009G062800--Sobic010G074200 Sobic009G062800--Sobic009G036300 Sobic009G062800--Sobic007G227600 Sobic008G148400 Sobic008G148400 Sobic009G062800--Sobic008G148400 Sobic009G238100 Sobic009G238100 Sobic009G062800--Sobic009G238100 Sobic009G253000 Sobic009G253000 Sobic009G062800--Sobic009G253000 Sobic010G028000 Sobic010G028000 Sobic009G062800--Sobic010G028000 Sobic005G145300 Sobic005G145300 Sobic009G062800--Sobic005G145300 Sobic007G065100 Sobic007G065100 Sobic002G181300--Sobic007G065100 Sobic004G317100 Sobic004G317100 Sobic002G181300--Sobic004G317100 Sobic002G181300--Sobic004G131040 Sobic004G181700 Sobic004G181700 Sobic002G181300--Sobic004G181700 Sobic002G425700 Sobic002G425700 Sobic002G181300--Sobic002G425700 Sobic002G276100 Sobic002G276100 Sobic002G181300--Sobic002G276100 Sobic002G181300--Sobic010G000600 Sobic001G498600 Sobic001G498600 Sobic002G181300--Sobic001G498600 Sobic005G044400 Sobic005G044400 Sobic002G181300--Sobic005G044400 Sobic010G000600--Sobic004G131040 Sobic007G110200 Sobic007G110200 Sobic010G000600--Sobic007G110200 Sobic006G153900 Sobic006G153900 Sobic010G000600--Sobic006G153900 Sobic001G300100 Sobic001G300100 Sobic010G000600--Sobic001G300100 Sobic009G193500 Sobic009G193500 Sobic010G000600--Sobic009G193500 Sobic004G210900 Sobic004G210900 Sobic010G000600--Sobic004G210900 Sobic003G381200 Sobic003G381200 Sobic010G000600--Sobic003G381200 Sobic010G000600--Sobic002G276100 Sobic010G000600--Sobic002G181300
Octagon: transcription factors


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