Gene annotation
Transcriptome id Sobic.007G042200.1
Synonym Sb07g003490
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A1B6PFP6
Pfam -
Panther DB PTHR23155 PTHR23155:SF498
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63020 : Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os04g08390.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK07721 , PNT71909 , KQJ92820
Barley -
Wheat TraesCS7D02G454400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G041900 Leucine Rich Repeat family protein, expressed -
2 Sobic.007G103800 Leucine Rich Repeat family protein, expressed -
3 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
4 Sobic.003G176200 - -
5 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
6 Sobic.008G130700 expressed protein -
7 Sobic.005G142900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G229500 cytochrome P450, putative, expressed -
9 Sobic.005G218100 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
10 Sobic.001G527600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@radical SAM enzyme, putative, expressed K02495: hemN, oxygen-independent coproporphyrinogen III oxidase
11 Sobic.010G161900 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
13 Sobic.006G062300 Leucine Rich Repeat family protein, expressed -
14 Sobic.007G090415 - -
15 Sobic.005G130700 expressed protein -
16 Sobic.002G232500 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
18 Sobic.005G227050 - -
19 Sobic.003G320500 early nodulin 20 precursor, putative, expressed -
20 Sobic.K009800 chloroplast unusual positioning protein, putative, expressed -


Gene co-expression network
sample Sobic007G042200 Sobic007G042200 Sobic007G041900 Sobic007G041900 Sobic007G042200--Sobic007G041900 Sobic007G103800 Sobic007G103800 Sobic007G042200--Sobic007G103800 Sobic001G275800 Sobic001G275800 Sobic007G042200--Sobic001G275800 Sobic003G176200 Sobic003G176200 Sobic007G042200--Sobic003G176200 Sobic006G001400 Sobic006G001400 Sobic007G042200--Sobic006G001400 Sobic008G130700 Sobic008G130700 Sobic007G042200--Sobic008G130700 Sobic005G142900 Sobic005G142900 Sobic007G042200--Sobic005G142900 Sobic001G229500 Sobic001G229500 Sobic007G042200--Sobic001G229500 Sobic005G218100 Sobic005G218100 Sobic007G042200--Sobic005G218100 Sobic007G041900--Sobic007G042200 Sobic007G041900--Sobic007G103800 Sobic007G041900--Sobic001G275800 Sobic007G123200 Sobic007G123200 Sobic007G041900--Sobic007G123200 Sobic007G041900--Sobic006G001400 Sobic005G227050 Sobic005G227050 Sobic007G041900--Sobic005G227050 Sobic007G151200 Sobic007G151200 Sobic007G041900--Sobic007G151200 Sobic001G442800 Sobic001G442800 Sobic007G041900--Sobic001G442800 Sobic007G041900--Sobic003G176200 Sobic007G012800 Sobic007G012800 Sobic007G103800--Sobic007G012800 Sobic007G103800--Sobic005G227050 Sobic009G134000 Sobic009G134000 Sobic007G103800--Sobic009G134000 Sobic002G179700 Sobic002G179700 Sobic007G103800--Sobic002G179700 Sobic009G154100 Sobic009G154100 Sobic007G103800--Sobic009G154100 Sobic005G130700 Sobic005G130700 Sobic007G103800--Sobic005G130700 Sobic005G196500 Sobic005G196500 Sobic007G103800--Sobic005G196500 Sobic003G420800 Sobic003G420800 Sobic007G103800--Sobic003G420800 Sobic005G209900 Sobic005G209900 Sobic007G103800--Sobic005G209900 Sobic005G203600 Sobic005G203600 Sobic001G275800--Sobic005G203600 Sobic007G090415 Sobic007G090415 Sobic001G275800--Sobic007G090415 Sobic001G275800--Sobic007G123200 Sobic001G275800--Sobic001G229500 Sobic001G275800--Sobic008G130700 Sobic005G020200 Sobic005G020200 Sobic001G275800--Sobic005G020200 Sobic001G275800--Sobic005G218100 Sobic001G275800--Sobic003G176200 Sobic001G275800--Sobic006G001400 Sobic003G176200--Sobic008G130700 Sobic003G176200--Sobic007G123200 Sobic003G176200--Sobic001G275800 Sobic003G176200--Sobic007G090415 Sobic005G121500 Sobic005G121500 Sobic003G176200--Sobic005G121500 Sobic009G102800 Sobic009G102800 Sobic003G176200--Sobic009G102800 Sobic003G029300 Sobic003G029300 Sobic003G176200--Sobic003G029300 Sobic008G008500 Sobic008G008500 Sobic003G176200--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic003G176200--Sobic004G151900 Sobic006G001400--Sobic005G196500 Sobic004G001200 Sobic004G001200 Sobic006G001400--Sobic004G001200 Sobic009G059100 Sobic009G059100 Sobic006G001400--Sobic009G059100 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic003G157500 Sobic003G157500 Sobic006G001400--Sobic003G157500 Sobic006G233600 Sobic006G233600 Sobic006G001400--Sobic006G233600 Sobic006G172700 Sobic006G172700 Sobic006G001400--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic006G001400--Sobic005G056201 Sobic008G130700--Sobic007G090415 Sobic002G190100 Sobic002G190100 Sobic008G130700--Sobic002G190100 Sobic006G025700 Sobic006G025700 Sobic008G130700--Sobic006G025700 Sobic008G130700--Sobic003G157500 Sobic008G130700--Sobic003G176200 Sobic008G130700--Sobic005G020200 Sobic005G141000 Sobic005G141000 Sobic008G130700--Sobic005G141000 Sobic008G130700--Sobic008G008500 Sobic001G215300 Sobic001G215300 Sobic008G130700--Sobic001G215300 Sobic001G228300 Sobic001G228300 Sobic005G142900--Sobic001G228300 Sobic005G142900--Sobic001G275800 Sobic001G061600 Sobic001G061600 Sobic005G142900--Sobic001G061600 Sobic003G283100 Sobic003G283100 Sobic005G142900--Sobic003G283100 Sobic001G164200 Sobic001G164200 Sobic005G142900--Sobic001G164200 Sobic001G138000 Sobic001G138000 Sobic005G142900--Sobic001G138000 Sobic007G182600 Sobic007G182600 Sobic005G142900--Sobic007G182600 Sobic005G142900--Sobic005G218100 Sobic001G182300 Sobic001G182300 Sobic005G142900--Sobic001G182300 Sobic001G229500--Sobic005G141000 Sobic002G065400 Sobic002G065400 Sobic001G229500--Sobic002G065400 Sobic001G229500--Sobic001G275800 Sobic001G229500--Sobic005G020200 Sobic001G229500--Sobic005G218100 Sobic001G229500--Sobic007G090415 Sobic001G229500--Sobic005G203600 Sobic002G124100 Sobic002G124100 Sobic001G229500--Sobic002G124100 Sobic001G229500--Sobic008G130700 Sobic002G023400 Sobic002G023400 Sobic005G218100--Sobic002G023400 Sobic005G218100--Sobic001G275800 Sobic005G218100--Sobic001G229500 Sobic002G007600 Sobic002G007600 Sobic005G218100--Sobic002G007600 Sobic008G167100 Sobic008G167100 Sobic005G218100--Sobic008G167100 Sobic005G162300 Sobic005G162300 Sobic005G218100--Sobic005G162300 Sobic001G166000 Sobic001G166000 Sobic005G218100--Sobic001G166000 Sobic005G218100--Sobic005G142900 Sobic002G017000 Sobic002G017000 Sobic005G218100--Sobic002G017000
Octagon: transcription factors


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