Gene annotation
Transcriptome id Sobic.007G088200.2,Sobic.007G088200.1
Synonym GPP1, Sb07g007660
Functional annotation haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
UniProt A0A1B6PGH6
Pfam PF13419
Panther DB PTHR18901 PTHR18901:SF38
NCBI CDD KOG2914; Predicted haloacid-halidohydrolase and related hydrolases
KEGG Orthology K17623; PUDP, pseudouridine 5'-phosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25840 : glycerol-3-phosphatase 1
RAP-DB (Rice) LOC_Os08g14580.1 : haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
MaizeGDB (Corn) Zm00025a054988
Brachypodium KQJ95767 , KQJ95769
Barley HORVU3Hr1G109780.2 , HORVU3Hr1G109780.3 , HORVU3Hr1G109780.1 , HORVU3Hr1G109780.4
Wheat TraesCS7D02G118300 , TraesCS3B02G559400 , TraesCS3D02G503200 , TraesCS3A02G495800 , TraesCS7B02G017100
Populus -


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cDNA sequences
Sobic.007G088200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G476600 Zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
2 Sobic.001G370800 - -
3 Sobic.009G026600 - -
4 Sobic.009G088300 SHR5-receptor-like kinase, putative, expressed -
5 Sobic.008G037300 RCN1 Centroradialis-like1 homogous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
6 Sobic.003G124400 - -
7 Sobic.004G093700 tetraspanin family protein, putative, expressed -
8 Sobic.002G309300 beta-expansin precursor, putative, expressed -
9 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
10 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
11 Sobic.003G410000 expressed protein -
12 Sobic.006G255200 - -
13 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
14 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
15 Sobic.005G068000 expressed protein -
16 Sobic.004G082600 OsFBX126 - F-box domain containing protein, expressed -
17 Sobic.001G239000 expressed protein -
18 Sobic.002G187900 expressed protein -
19 Sobic.010G129100 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
20 Sobic.009G094200 - -


Gene co-expression network
sample Sobic007G088200 Sobic007G088200 Sobic001G476600 Sobic001G476600 Sobic007G088200--Sobic001G476600 Sobic001G370800 Sobic001G370800 Sobic007G088200--Sobic001G370800 Sobic009G026600 Sobic009G026600 Sobic007G088200--Sobic009G026600 Sobic009G088300 Sobic009G088300 Sobic007G088200--Sobic009G088300 Sobic008G037300 Sobic008G037300 Sobic007G088200--Sobic008G037300 Sobic003G124400 Sobic003G124400 Sobic007G088200--Sobic003G124400 Sobic004G093700 Sobic004G093700 Sobic007G088200--Sobic004G093700 Sobic002G309300 Sobic002G309300 Sobic007G088200--Sobic002G309300 Sobic003G263900 Sobic003G263900 Sobic007G088200--Sobic003G263900 Sobic003G312800 Sobic003G312800 Sobic001G476600--Sobic003G312800 Sobic001G190900 Sobic001G190900 Sobic001G476600--Sobic001G190900 Sobic003G312600 Sobic003G312600 Sobic001G476600--Sobic003G312600 Sobic001G239000 Sobic001G239000 Sobic001G476600--Sobic001G239000 Sobic001G476600--Sobic009G026600 Sobic001G476600--Sobic001G370800 Sobic003G312900 Sobic003G312900 Sobic001G476600--Sobic003G312900 Sobic005G027350 Sobic005G027350 Sobic001G476600--Sobic005G027350 Sobic009G094200 Sobic009G094200 Sobic001G476600--Sobic009G094200 Sobic001G370800--Sobic009G026600 Sobic004G173200 Sobic004G173200 Sobic001G370800--Sobic004G173200 Sobic001G038700 Sobic001G038700 Sobic001G370800--Sobic001G038700 Sobic001G442000 Sobic001G442000 Sobic001G370800--Sobic001G442000 Sobic001G370800--Sobic002G309300 Sobic001G370800--Sobic009G088300 Sobic004G218400 Sobic004G218400 Sobic001G370800--Sobic004G218400 Sobic006G255200 Sobic006G255200 Sobic001G370800--Sobic006G255200 Sobic001G370800--Sobic003G263900 Sobic009G026600--Sobic001G370800 Sobic003G063400 Sobic003G063400 Sobic009G026600--Sobic003G063400 Sobic009G026600--Sobic005G027350 Sobic009G026600--Sobic001G038700 Sobic004G250400 Sobic004G250400 Sobic009G026600--Sobic004G250400 Sobic001G001800 Sobic001G001800 Sobic009G026600--Sobic001G001800 Sobic009G026600--Sobic008G037300 Sobic009G026600--Sobic002G309300 Sobic010G012200 Sobic010G012200 Sobic009G026600--Sobic010G012200 Sobic001G424650 Sobic001G424650 Sobic009G088300--Sobic001G424650 Sobic010G129100 Sobic010G129100 Sobic009G088300--Sobic010G129100 Sobic009G088300--Sobic001G370800 Sobic009G088300--Sobic001G442000 Sobic009G088300--Sobic006G255200 Sobic001G492400 Sobic001G492400 Sobic009G088300--Sobic001G492400 Sobic001G334400 Sobic001G334400 Sobic009G088300--Sobic001G334400 Sobic009G088300--Sobic003G263900 Sobic002G262850 Sobic002G262850 Sobic009G088300--Sobic002G262850 Sobic005G068000 Sobic005G068000 Sobic008G037300--Sobic005G068000 Sobic008G037300--Sobic009G026600 Sobic008G037300--Sobic002G309300 Sobic008G037300--Sobic003G124400 Sobic008G037300--Sobic001G370800 Sobic008G037300--Sobic005G027350 Sobic004G072201 Sobic004G072201 Sobic008G037300--Sobic004G072201 Sobic008G037300--Sobic001G038700 Sobic008G037300--Sobic001G239000 Sobic003G124400--Sobic005G068000 Sobic001G079000 Sobic001G079000 Sobic003G124400--Sobic001G079000 Sobic003G124400--Sobic001G239000 Sobic003G375500 Sobic003G375500 Sobic003G124400--Sobic003G375500 Sobic003G124400--Sobic008G037300 Sobic003G124400--Sobic005G027350 Sobic010G183350 Sobic010G183350 Sobic003G124400--Sobic010G183350 Sobic003G124400--Sobic009G026600 Sobic003G124400--Sobic003G312800 Sobic010G100700 Sobic010G100700 Sobic004G093700--Sobic010G100700 Sobic004G093700--Sobic003G063400 Sobic004G093700--Sobic009G026600 Sobic008G072800 Sobic008G072800 Sobic004G093700--Sobic008G072800 Sobic007G183600 Sobic007G183600 Sobic004G093700--Sobic007G183600 Sobic004G093700--Sobic004G250400 Sobic008G142200 Sobic008G142200 Sobic004G093700--Sobic008G142200 Sobic007G141900 Sobic007G141900 Sobic004G093700--Sobic007G141900 Sobic002G324801 Sobic002G324801 Sobic004G093700--Sobic002G324801 Sobic002G309300--Sobic004G218400 Sobic002G309300--Sobic001G038700 Sobic002G309300--Sobic004G072201 Sobic002G309300--Sobic006G255200 Sobic006G268100 Sobic006G268100 Sobic002G309300--Sobic006G268100 Sobic002G309300--Sobic001G370800 Sobic002G309300--Sobic009G026600 Sobic002G309300--Sobic001G442000 Sobic002G309300--Sobic008G037300 Sobic002G187900 Sobic002G187900 Sobic003G263900--Sobic002G187900 Sobic003G263900--Sobic001G038700 Sobic003G263900--Sobic006G255200 Sobic003G263900--Sobic008G142200 Sobic004G127600 Sobic004G127600 Sobic003G263900--Sobic004G127600 Sobic002G398600 Sobic002G398600 Sobic003G263900--Sobic002G398600 Sobic006G249600 Sobic006G249600 Sobic003G263900--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic003G263900--Sobic004G227700 Sobic003G263900--Sobic004G072201
Octagon: transcription factors


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