Gene annotation
Transcriptome id Sobic.008G030900.1,Sobic.008G030900.2
Synonym Sb08g002690, LTP1, ATLTP1, LP1
Functional annotation LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5YRL2 , A0A1Z5R5E6 , Q43194 , Q43193
Pfam PF00234
Panther DB PTHR33076 PTHR33076:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38540 : lipid transfer protein 1
RAP-DB (Rice) LOC_Os11g24070.1 : LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a053814 , Zm00025a029018
Brachypodium -
Barley HORVU3Hr1G009360.11 , HORVU5Hr1G046550.1
Wheat TraesCS3B02G063900 , TraesCSU02G258000 , TraesCS3B02G064200
Populus -


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cDNA sequences
Sobic.008G030900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G225700 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
2 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.002G064900 FHA domain containing protein, putative, expressed -
4 Sobic.003G404000 Plant stearoyl-acyl-carrier-protein desaturase family protein(PubMedID : 26465154)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
5 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.005G102800 OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
7 Sobic.010G012001 - -
8 Sobic.003G140800 expressed protein -
9 Sobic.010G152000 powdery mildew resistant protein 5, putative, expressed -
10 Sobic.001G374900 RALFL15 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
11 Sobic.008G175400 U-box domain-containing protein, putative, expressed -
12 Sobic.006G193500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.005G036200 protein of unknown function containing protein, expressed -
14 Sobic.008G166050 - -
15 Sobic.002G155100 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed K12524: bifunctional aspartokinase / homoserine dehydrogenase 1
16 Sobic.010G222666 - -
17 Sobic.001G544400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@oleosin, putative, expressed -
18 Sobic.003G102700 exostosin family protein, putative, expressed -
19 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
20 Sobic.004G291200 - -


Gene co-expression network
sample Sobic008G030900 Sobic008G030900 Sobic007G225700 Sobic007G225700 Sobic008G030900--Sobic007G225700 Sobic007G192200 Sobic007G192200 Sobic008G030900--Sobic007G192200 Sobic002G064900 Sobic002G064900 Sobic008G030900--Sobic002G064900 Sobic003G404000 Sobic003G404000 Sobic008G030900--Sobic003G404000 Sobic003G223000 Sobic003G223000 Sobic008G030900--Sobic003G223000 Sobic005G102800 Sobic005G102800 Sobic008G030900--Sobic005G102800 Sobic010G012001 Sobic010G012001 Sobic008G030900--Sobic010G012001 Sobic003G140800 Sobic003G140800 Sobic008G030900--Sobic003G140800 Sobic010G152000 Sobic010G152000 Sobic008G030900--Sobic010G152000 Sobic002G256800 Sobic002G256800 Sobic007G225700--Sobic002G256800 Sobic002G155100 Sobic002G155100 Sobic007G225700--Sobic002G155100 Sobic007G225700--Sobic005G102800 Sobic010G155600 Sobic010G155600 Sobic007G225700--Sobic010G155600 Sobic006G193500 Sobic006G193500 Sobic007G225700--Sobic006G193500 Sobic003G102700 Sobic003G102700 Sobic007G225700--Sobic003G102700 Sobic007G225700--Sobic003G223000 Sobic006G237000 Sobic006G237000 Sobic007G225700--Sobic006G237000 Sobic008G100400 Sobic008G100400 Sobic007G225700--Sobic008G100400 Sobic005G036200 Sobic005G036200 Sobic007G192200--Sobic005G036200 Sobic006G135800 Sobic006G135800 Sobic007G192200--Sobic006G135800 Sobic007G192200--Sobic003G140800 Sobic009G002200 Sobic009G002200 Sobic007G192200--Sobic009G002200 Sobic006G226000 Sobic006G226000 Sobic007G192200--Sobic006G226000 Sobic009G012600 Sobic009G012600 Sobic007G192200--Sobic009G012600 Sobic004G242200 Sobic004G242200 Sobic007G192200--Sobic004G242200 Sobic007G192200--Sobic005G102800 Sobic009G031800 Sobic009G031800 Sobic007G192200--Sobic009G031800 Sobic001G535600 Sobic001G535600 Sobic002G064900--Sobic001G535600 Sobic003G286900 Sobic003G286900 Sobic002G064900--Sobic003G286900 Sobic009G231100 Sobic009G231100 Sobic002G064900--Sobic009G231100 Sobic008G176900 Sobic008G176900 Sobic002G064900--Sobic008G176900 Sobic003G287000 Sobic003G287000 Sobic002G064900--Sobic003G287000 Sobic002G064900--Sobic008G030900 Sobic004G299700 Sobic004G299700 Sobic002G064900--Sobic004G299700 Sobic001G423300 Sobic001G423300 Sobic002G064900--Sobic001G423300 Sobic006G140300 Sobic006G140300 Sobic002G064900--Sobic006G140300 Sobic001G125300 Sobic001G125300 Sobic003G404000--Sobic001G125300 Sobic003G404000--Sobic010G012001 Sobic003G418200 Sobic003G418200 Sobic003G404000--Sobic003G418200 Sobic001G480550 Sobic001G480550 Sobic003G404000--Sobic001G480550 Sobic003G224600 Sobic003G224600 Sobic003G404000--Sobic003G224600 Sobic002G366300 Sobic002G366300 Sobic003G404000--Sobic002G366300 Sobic002G391100 Sobic002G391100 Sobic003G404000--Sobic002G391100 Sobic002G393332 Sobic002G393332 Sobic003G404000--Sobic002G393332 Sobic002G118300 Sobic002G118300 Sobic003G404000--Sobic002G118300 Sobic003G333700 Sobic003G333700 Sobic003G223000--Sobic003G333700 Sobic002G078000 Sobic002G078000 Sobic003G223000--Sobic002G078000 Sobic008G101900 Sobic008G101900 Sobic003G223000--Sobic008G101900 Sobic009G002900 Sobic009G002900 Sobic003G223000--Sobic009G002900 Sobic009G177200 Sobic009G177200 Sobic003G223000--Sobic009G177200 Sobic003G223000--Sobic009G231100 Sobic001G165801 Sobic001G165801 Sobic003G223000--Sobic001G165801 Sobic001G104300 Sobic001G104300 Sobic003G223000--Sobic001G104300 Sobic002G272400 Sobic002G272400 Sobic003G223000--Sobic002G272400 Sobic005G102800--Sobic003G102700 Sobic005G102800--Sobic007G192200 Sobic004G269100 Sobic004G269100 Sobic005G102800--Sobic004G269100 Sobic005G102800--Sobic006G226000 Sobic009G119800 Sobic009G119800 Sobic005G102800--Sobic009G119800 Sobic005G102800--Sobic003G140800 Sobic001G381000 Sobic001G381000 Sobic005G102800--Sobic001G381000 Sobic004G244200 Sobic004G244200 Sobic005G102800--Sobic004G244200 Sobic005G102800--Sobic009G031800 Sobic010G012001--Sobic003G404000 Sobic010G012001--Sobic008G030900 Sobic006G030001 Sobic006G030001 Sobic010G012001--Sobic006G030001 Sobic002G240500 Sobic002G240500 Sobic010G012001--Sobic002G240500 Sobic010G012001--Sobic002G118300 Sobic001G017500 Sobic001G017500 Sobic010G012001--Sobic001G017500 Sobic001G544400 Sobic001G544400 Sobic010G012001--Sobic001G544400 Sobic010G012001--Sobic002G391100 Sobic003G236200 Sobic003G236200 Sobic010G012001--Sobic003G236200 Sobic010G074940 Sobic010G074940 Sobic003G140800--Sobic010G074940 Sobic003G140800--Sobic001G544400 Sobic002G393100 Sobic002G393100 Sobic003G140800--Sobic002G393100 Sobic001G136400 Sobic001G136400 Sobic003G140800--Sobic001G136400 Sobic001G380800 Sobic001G380800 Sobic003G140800--Sobic001G380800 Sobic004G164800 Sobic004G164800 Sobic003G140800--Sobic004G164800 Sobic005G147600 Sobic005G147600 Sobic003G140800--Sobic005G147600 Sobic004G301800 Sobic004G301800 Sobic003G140800--Sobic004G301800 Sobic001G208500 Sobic001G208500 Sobic003G140800--Sobic001G208500 Sobic004G339900 Sobic004G339900 Sobic010G152000--Sobic004G339900 Sobic002G420400 Sobic002G420400 Sobic010G152000--Sobic002G420400 Sobic004G071050 Sobic004G071050 Sobic010G152000--Sobic004G071050 Sobic010G152000--Sobic005G036200 Sobic001G456400 Sobic001G456400 Sobic010G152000--Sobic001G456400 Sobic010G152000--Sobic004G242200 Sobic001G485200 Sobic001G485200 Sobic010G152000--Sobic001G485200 Sobic003G071901 Sobic003G071901 Sobic010G152000--Sobic003G071901 Sobic004G065800 Sobic004G065800 Sobic010G152000--Sobic004G065800
Octagon: transcription factors


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