Gene annotation
Transcriptome id Sobic.008G046800.2,Sobic.008G046800.1
Synonym Sb08g003960
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1Z5R5P4 , C5YS95
Pfam PF07714
Panther DB PTHR23257 PTHR23257:SF505
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G38470 : ACT-like protein tyrosine kinase family protein
RAP-DB (Rice) LOC_Os12g06670.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a053986 , Zm00025a025785
Brachypodium PNT66491 , KQJ94768 , KQJ94769 , KQJ92139 , KQJ92138 , KQJ94770 , KQJ89316
Barley HORVU5Hr1G040040.9 , HORVU5Hr1G040040.8 , HORVU5Hr1G040040.3 , HORVU5Hr1G040040.2 , HORVU5Hr1G040040.1 , HORVU5Hr1G040040.7 , HORVU5Hr1G040040.6 , HORVU5Hr1G040040.5 , HORVU5Hr1G040040.4
Wheat TraesCS5B02G124400 , TraesCS5D02G132600 , TraesCS5D02G132600 , TraesCS5A02G124800 , TraesCS5A02G124800 , TraesCS5A02G124800 , TraesCS5B02G124400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.008G046800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G226500 suppressor of G2 allele of SKP1, putative, expressed K12795: SUGT1, suppressor of G2 allele of SKP1
2 Sobic.006G270900 acyl-CoA-binding domain-containing protein 6, putative, expressed -
3 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
4 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
5 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
6 Sobic.010G000900 spotted leaf 11, putative, expressed -
7 Sobic.003G314100 AGAP000951-PA, putative, expressed -
8 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
9 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
10 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
11 Sobic.003G261500 lipase, putative, expressed -
12 Sobic.010G058900 BSD domain containing protein, expressed -
13 Sobic.001G085100 expressed protein -
14 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
15 Sobic.002G087900 protein phosphatase inhibitor 2 containing protein, expressed K16833: PPP1R2, protein phosphatase inhibitor 2
16 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
17 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
18 Sobic.003G261400 DUF292 domain containing protein, expressed -
19 Sobic.002G161800 Myb-like DNA-binding domain containing protein, putative, expressed -
20 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4


Gene co-expression network
sample Sobic008G046800 Sobic008G046800 Sobic003G226500 Sobic003G226500 Sobic008G046800--Sobic003G226500 Sobic006G270900 Sobic006G270900 Sobic008G046800--Sobic006G270900 Sobic004G104900 Sobic004G104900 Sobic008G046800--Sobic004G104900 Sobic001G051200 Sobic001G051200 Sobic008G046800--Sobic001G051200 Sobic009G259400 Sobic009G259400 Sobic008G046800--Sobic009G259400 Sobic010G000900 Sobic010G000900 Sobic008G046800--Sobic010G000900 Sobic003G314100 Sobic003G314100 Sobic008G046800--Sobic003G314100 Sobic009G165800 Sobic009G165800 Sobic008G046800--Sobic009G165800 Sobic003G250500 Sobic003G250500 Sobic008G046800--Sobic003G250500 Sobic003G226500--Sobic003G250500 Sobic003G226500--Sobic004G104900 Sobic003G007500 Sobic003G007500 Sobic003G226500--Sobic003G007500 Sobic003G350600 Sobic003G350600 Sobic003G226500--Sobic003G350600 Sobic001G136900 Sobic001G136900 Sobic003G226500--Sobic001G136900 Sobic010G083700 Sobic010G083700 Sobic003G226500--Sobic010G083700 Sobic004G226800 Sobic004G226800 Sobic003G226500--Sobic004G226800 Sobic001G512600 Sobic001G512600 Sobic003G226500--Sobic001G512600 Sobic001G054200 Sobic001G054200 Sobic003G226500--Sobic001G054200 Sobic002G268400 Sobic002G268400 Sobic006G270900--Sobic002G268400 Sobic002G113900 Sobic002G113900 Sobic006G270900--Sobic002G113900 Sobic001G281600 Sobic001G281600 Sobic006G270900--Sobic001G281600 Sobic004G356900 Sobic004G356900 Sobic006G270900--Sobic004G356900 Sobic010G279700 Sobic010G279700 Sobic006G270900--Sobic010G279700 Sobic003G405700 Sobic003G405700 Sobic006G270900--Sobic003G405700 Sobic010G057900 Sobic010G057900 Sobic006G270900--Sobic010G057900 Sobic009G004600 Sobic009G004600 Sobic006G270900--Sobic009G004600 Sobic001G143500 Sobic001G143500 Sobic006G270900--Sobic001G143500 Sobic002G256300 Sobic002G256300 Sobic004G104900--Sobic002G256300 Sobic004G104900--Sobic010G083700 Sobic010G168600 Sobic010G168600 Sobic004G104900--Sobic010G168600 Sobic010G018700 Sobic010G018700 Sobic004G104900--Sobic010G018700 Sobic004G104900--Sobic003G007500 Sobic004G066200 Sobic004G066200 Sobic004G104900--Sobic004G066200 Sobic009G228700 Sobic009G228700 Sobic004G104900--Sobic009G228700 Sobic001G007200 Sobic001G007200 Sobic004G104900--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic004G104900--Sobic009G246950 Sobic003G015900 Sobic003G015900 Sobic001G051200--Sobic003G015900 Sobic001G051200--Sobic003G007500 Sobic003G261400 Sobic003G261400 Sobic001G051200--Sobic003G261400 Sobic001G047400 Sobic001G047400 Sobic001G051200--Sobic001G047400 Sobic001G051200--Sobic010G000900 Sobic007G168600 Sobic007G168600 Sobic001G051200--Sobic007G168600 Sobic010G058500 Sobic010G058500 Sobic001G051200--Sobic010G058500 Sobic002G400000 Sobic002G400000 Sobic001G051200--Sobic002G400000 Sobic001G051200--Sobic010G168600 Sobic004G121100 Sobic004G121100 Sobic009G259400--Sobic004G121100 Sobic002G395801 Sobic002G395801 Sobic009G259400--Sobic002G395801 Sobic003G012200 Sobic003G012200 Sobic009G259400--Sobic003G012200 Sobic009G217100 Sobic009G217100 Sobic009G259400--Sobic009G217100 Sobic003G063000 Sobic003G063000 Sobic009G259400--Sobic003G063000 Sobic010G251000 Sobic010G251000 Sobic009G259400--Sobic010G251000 Sobic006G200600 Sobic006G200600 Sobic009G259400--Sobic006G200600 Sobic009G259400--Sobic001G281600 Sobic008G179700 Sobic008G179700 Sobic009G259400--Sobic008G179700 Sobic010G000900--Sobic002G400000 Sobic010G000900--Sobic003G012200 Sobic010G000900--Sobic001G047400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100 Sobic003G314100--Sobic010G057900 Sobic003G314100--Sobic002G268400 Sobic006G250900 Sobic006G250900 Sobic003G314100--Sobic006G250900 Sobic006G101700 Sobic006G101700 Sobic003G314100--Sobic006G101700 Sobic003G314100--Sobic004G356900 Sobic001G263000 Sobic001G263000 Sobic003G314100--Sobic001G263000 Sobic003G314100--Sobic009G165800 Sobic003G314100--Sobic003G226500 Sobic003G314100--Sobic001G281600 Sobic001G080700 Sobic001G080700 Sobic009G165800--Sobic001G080700 Sobic009G165800--Sobic001G047400 Sobic009G165800--Sobic006G101700 Sobic002G110700 Sobic002G110700 Sobic009G165800--Sobic002G110700 Sobic009G165800--Sobic003G015900 Sobic009G165800--Sobic010G083700 Sobic009G165800--Sobic010G251000 Sobic009G165800--Sobic004G121100 Sobic003G264200 Sobic003G264200 Sobic009G165800--Sobic003G264200 Sobic004G059000 Sobic004G059000 Sobic003G250500--Sobic004G059000 Sobic004G305600 Sobic004G305600 Sobic003G250500--Sobic004G305600 Sobic004G301900 Sobic004G301900 Sobic003G250500--Sobic004G301900 Sobic008G062000 Sobic008G062000 Sobic003G250500--Sobic008G062000 Sobic003G250500--Sobic001G281600 Sobic003G250500--Sobic003G226500 Sobic004G253000 Sobic004G253000 Sobic003G250500--Sobic004G253000 Sobic003G250500--Sobic001G512600 Sobic001G119300 Sobic001G119300 Sobic003G250500--Sobic001G119300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.