Gene annotation
Transcriptome id Sobic.008G117900.1
Synonym Sb08g017160
Functional annotation OsGrx_C12 - glutaredoxin subgroup III, expressed
UniProt C5YPD7
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF98
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K03676; grxC, GLRX, glutaredoxin 3
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G47870 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os12g35330.1 : OsGrx_C12 - glutaredoxin subgroup III, expressed
MaizeGDB (Corn) Zm00025a054355
Brachypodium KQJ86457 , KQJ86460
Barley -
Wheat TraesCS4D02G147300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G055100 - -
2 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
3 Sobic.005G054300 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
4 Sobic.009G026400 - -
5 Sobic.009G101600 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
6 Sobic.010G104200 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
8 Sobic.002G331000 OsFBX462 - F-box domain containing protein, expressed -
9 Sobic.005G149000 astaxanthin synthase KC28, putative, expressed -
10 Sobic.005G054600 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
11 Sobic.005G054000 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
12 Sobic.004G199600 DUF581 domain containing protein, expressed -
13 Sobic.009G004700 stripe rust resistance protein Yr10, putative, expressed -
14 Sobic.009G113600 - -
15 Sobic.003G176100 expressed protein -
16 Sobic.002G062300 expressed protein -
17 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
18 Sobic.005G210300 - -
19 Sobic.002G060500 OsFBX237 - F-box domain containing protein, expressed -
20 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase


Gene co-expression network
sample Sobic008G117900 Sobic008G117900 Sobic006G055100 Sobic006G055100 Sobic008G117900--Sobic006G055100 Sobic004G345900 Sobic004G345900 Sobic008G117900--Sobic004G345900 Sobic005G054300 Sobic005G054300 Sobic008G117900--Sobic005G054300 Sobic009G026400 Sobic009G026400 Sobic008G117900--Sobic009G026400 Sobic009G101600 Sobic009G101600 Sobic008G117900--Sobic009G101600 Sobic010G104200 Sobic010G104200 Sobic008G117900--Sobic010G104200 Sobic010G146200 Sobic010G146200 Sobic008G117900--Sobic010G146200 Sobic002G331000 Sobic002G331000 Sobic008G117900--Sobic002G331000 Sobic005G149000 Sobic005G149000 Sobic008G117900--Sobic005G149000 Sobic006G055100--Sobic010G104200 Sobic006G055100--Sobic005G149000 Sobic006G055100--Sobic008G117900 Sobic008G052450 Sobic008G052450 Sobic006G055100--Sobic008G052450 Sobic010G063433 Sobic010G063433 Sobic006G055100--Sobic010G063433 SobicK024000 SobicK024000 Sobic006G055100--SobicK024000 Sobic002G060500 Sobic002G060500 Sobic006G055100--Sobic002G060500 Sobic009G113600 Sobic009G113600 Sobic006G055100--Sobic009G113600 Sobic006G055100--Sobic009G026400 Sobic010G057400 Sobic010G057400 Sobic004G345900--Sobic010G057400 Sobic005G085200 Sobic005G085200 Sobic004G345900--Sobic005G085200 Sobic010G057300 Sobic010G057300 Sobic004G345900--Sobic010G057300 Sobic001G277000 Sobic001G277000 Sobic004G345900--Sobic001G277000 Sobic007G189800 Sobic007G189800 Sobic004G345900--Sobic007G189800 Sobic004G199600 Sobic004G199600 Sobic004G345900--Sobic004G199600 Sobic002G213800 Sobic002G213800 Sobic004G345900--Sobic002G213800 Sobic010G270300 Sobic010G270300 Sobic004G345900--Sobic010G270300 Sobic004G345900--Sobic010G146200 Sobic005G054600 Sobic005G054600 Sobic005G054300--Sobic005G054600 Sobic005G054000 Sobic005G054000 Sobic005G054300--Sobic005G054000 Sobic005G054300--Sobic009G026400 Sobic005G054300--Sobic009G101600 Sobic005G142200 Sobic005G142200 Sobic005G054300--Sobic005G142200 Sobic002G062300 Sobic002G062300 Sobic005G054300--Sobic002G062300 Sobic005G212600 Sobic005G212600 Sobic005G054300--Sobic005G212600 Sobic001G305400 Sobic001G305400 Sobic005G054300--Sobic001G305400 Sobic002G221200 Sobic002G221200 Sobic005G054300--Sobic002G221200 Sobic009G026400--Sobic002G060500 Sobic009G026400--Sobic009G101600 Sobic007G059300 Sobic007G059300 Sobic009G026400--Sobic007G059300 Sobic009G026400--Sobic002G062300 Sobic004G196500 Sobic004G196500 Sobic009G026400--Sobic004G196500 Sobic009G026400--Sobic009G113600 Sobic009G026400--Sobic005G054600 Sobic009G026400--Sobic005G142200 Sobic009G026400--Sobic005G054300 Sobic009G101600--Sobic005G142200 Sobic009G101600--Sobic009G026400 Sobic009G101600--Sobic002G060500 SobicK010000 SobicK010000 Sobic009G101600--SobicK010000 Sobic004G200866 Sobic004G200866 Sobic009G101600--Sobic004G200866 Sobic009G101600--Sobic005G054300 Sobic009G101600--Sobic004G196500 Sobic005G043400 Sobic005G043400 Sobic009G101600--Sobic005G043400 Sobic009G101600--Sobic005G054600 Sobic010G104200--Sobic006G055100 Sobic010G104200--Sobic005G149000 Sobic010G104200--Sobic010G063433 Sobic002G007250 Sobic002G007250 Sobic010G104200--Sobic002G007250 Sobic008G009500 Sobic008G009500 Sobic010G104200--Sobic008G009500 Sobic010G104200--SobicK024000 Sobic008G031350 Sobic008G031350 Sobic010G104200--Sobic008G031350 Sobic005G203400 Sobic005G203400 Sobic010G104200--Sobic005G203400 Sobic010G104200--Sobic009G113600 Sobic003G176100 Sobic003G176100 Sobic010G146200--Sobic003G176100 Sobic010G146200--Sobic009G113600 Sobic010G050600 Sobic010G050600 Sobic010G146200--Sobic010G050600 Sobic005G130100 Sobic005G130100 Sobic010G146200--Sobic005G130100 Sobic010G146200--Sobic007G059300 Sobic002G051400 Sobic002G051400 Sobic010G146200--Sobic002G051400 Sobic010G146200--SobicK024000 Sobic009G078500 Sobic009G078500 Sobic010G146200--Sobic009G078500 Sobic010G146200--Sobic007G189800 Sobic002G331000--Sobic004G345900 Sobic002G331000--Sobic002G213800 Sobic002G331000--Sobic005G085200 Sobic002G331000--Sobic010G057400 Sobic003G406700 Sobic003G406700 Sobic002G331000--Sobic003G406700 Sobic009G197000 Sobic009G197000 Sobic002G331000--Sobic009G197000 Sobic002G331000--Sobic004G199600 Sobic002G331000--Sobic009G078500 Sobic002G331000--Sobic010G270300 Sobic005G221425 Sobic005G221425 Sobic005G149000--Sobic005G221425 Sobic001G253100 Sobic001G253100 Sobic005G149000--Sobic001G253100 Sobic004G076732 Sobic004G076732 Sobic005G149000--Sobic004G076732 Sobic008G079100 Sobic008G079100 Sobic005G149000--Sobic008G079100 Sobic005G149000--Sobic008G009500 Sobic005G110430 Sobic005G110430 Sobic005G149000--Sobic005G110430 Sobic009G209800 Sobic009G209800 Sobic005G149000--Sobic009G209800 Sobic005G149000--Sobic008G052450 Sobic005G149000--SobicK024000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.