Gene annotation
| Transcriptome id |
Sobic.008G141700.1 |
| Synonym |
GUS2, Sb08g019250, AtGUS2 |
| Functional annotation |
heparanase-like protein precursor, putative, expressed |
| UniProt |
C5YQE8 |
| Pfam |
PF03662 |
| Panther DB |
PTHR14363
PTHR14363:SF17 |
| NCBI CDD |
- |
| KEGG Orthology |
K07964; heparanase |
| Gene Ontology |
GO:0016798; hydrolase activity, acting on glycosyl bonds
GO:0016020membrane |
Orthologs (automatic annotation)
| TAIR |
AT5G07830 : glucuronidase 2 |
| RAP-DB (Rice) |
LOC_Os12g38920.2 : heparanase-like protein precursor, putative, expressed |
| MaizeGDB (Corn) |
Zm00025a025380
, Zm00025a004343 |
| Brachypodium |
KQJ86154
, KQJ86155 |
| Barley |
HORVU5Hr1G019650.1
, HORVU5Hr1G019650.2
, HORVU5Hr1G019650.3
, HORVU5Hr1G019650.5
, HORVU5Hr1G019650.8
, HORVU5Hr1G019650.4
, HORVU5Hr1G019650.6
, HORVU5Hr1G019650.7 |
| Wheat |
TraesCS5B02G080400
, TraesCS5B02G080400
, TraesCS5A02G074000
, TraesCS5A02G074000
, TraesCS5A02G074000
, TraesCS5D02G087700
, TraesCS5D02G087700 |
| Populus |
- |
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
| 1 |
Sobic.003G443601 |
- |
- |
| 2 |
Sobic.003G069601 |
- |
- |
| 3 |
Sobic.009G088300 |
SHR5-receptor-like kinase, putative, expressed |
- |
| 4 |
Sobic.001G334400 |
protein kinase, putative, expressed |
- |
| 5 |
Sobic.001G424650 |
- |
- |
| 6 |
Sobic.006G255200 |
- |
- |
| 7 |
Sobic.010G129100 |
aspartic proteinase nepenthesin-2 precursor, putative, expressed |
- |
| 8 |
Sobic.001G212900 |
FHA domain containing protein, putative, expressed |
K10867: NBN, nibrin |
| 9 |
Sobic.004G127600 |
glyoxalase family protein, putative, expressed |
K01759: GLO1, lactoylglutathione lyase |
| 10 |
Sobic.001G109400 |
glycosyl hydrolases family 17, putative, expressed |
- |
| 11 |
Sobic.002G377501 |
- |
- |
| 12 |
Sobic.001G261452 |
- |
- |
| 13 |
Sobic.001G492400 |
male sterility protein, putative, expressed |
K13356: alcohol-forming fatty acyl-CoA reductase |
| 14 |
Sobic.002G374000 |
- |
- |
| 15 |
Sobic.002G127300 |
- |
- |
| 16 |
Sobic.009G183650 |
- |
- |
| 17 |
Sobic.004G072201 |
- |
- |
| 18 |
Sobic.001G442000 |
Ser/Thr protein phosphatase family protein, putative, expressed |
K14379: tartrate-resistant acid phosphatase type 5 |
| 19 |
Sobic.008G177100 |
expressed protein |
- |
| 20 |
Sobic.008G016400 |
- |
- |
Gene co-expression network
|
|
Octagon: transcription factors