Gene annotation
Transcriptome id Sobic.008G177100.5,Sobic.008G177100.1,Sobic.008G177100.4,Sobic.008G177100.3,Sobic.008G177100.2
Synonym Sb08g022090
Functional annotation expressed protein
UniProt A0A1B6PET4 , A0A1Z5R7A0 , A0A1B6PEE6 , A0A1Z5R8A1
Pfam -
Panther DB PTHR36065 PTHR36065:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06590 : -
RAP-DB (Rice) LOC_Os12g42840.1 : expressed protein
MaizeGDB (Corn) Zm00025a025120
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
2 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
3 Sobic.002G187900 expressed protein -
4 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
5 Sobic.002G262850 - -
6 Sobic.005G048700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
7 Sobic.004G058400 RNA binding protein, putative, expressed -
8 Sobic.010G129100 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
9 Sobic.006G255200 - -
10 Sobic.006G134300 - -
11 Sobic.004G082600 OsFBX126 - F-box domain containing protein, expressed -
12 Sobic.009G088300 SHR5-receptor-like kinase, putative, expressed -
13 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
14 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
15 Sobic.001G370800 - -
16 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
17 Sobic.001G329001 - K03129: transcription initiation factor TFIID subunit 4
18 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
19 Sobic.010G000200 expressed protein -
20 Sobic.003G410000 expressed protein -


Gene co-expression network
sample Sobic008G177100 Sobic008G177100 Sobic004G127600 Sobic004G127600 Sobic008G177100--Sobic004G127600 Sobic001G492400 Sobic001G492400 Sobic008G177100--Sobic001G492400 Sobic002G187900 Sobic002G187900 Sobic008G177100--Sobic002G187900 Sobic004G250400 Sobic004G250400 Sobic008G177100--Sobic004G250400 Sobic002G262850 Sobic002G262850 Sobic008G177100--Sobic002G262850 Sobic005G048700 Sobic005G048700 Sobic008G177100--Sobic005G048700 Sobic004G058400 Sobic004G058400 Sobic008G177100--Sobic004G058400 Sobic010G129100 Sobic010G129100 Sobic008G177100--Sobic010G129100 Sobic006G255200 Sobic006G255200 Sobic008G177100--Sobic006G255200 Sobic004G127600--Sobic002G187900 Sobic003G263900 Sobic003G263900 Sobic004G127600--Sobic003G263900 Sobic004G127600--Sobic006G255200 Sobic001G442000 Sobic001G442000 Sobic004G127600--Sobic001G442000 Sobic001G212900 Sobic001G212900 Sobic004G127600--Sobic001G212900 Sobic001G109400 Sobic001G109400 Sobic004G127600--Sobic001G109400 Sobic002G374000 Sobic002G374000 Sobic004G127600--Sobic002G374000 Sobic004G072201 Sobic004G072201 Sobic004G127600--Sobic004G072201 Sobic001G038700 Sobic001G038700 Sobic004G127600--Sobic001G038700 Sobic001G424650 Sobic001G424650 Sobic001G492400--Sobic001G424650 Sobic001G492400--Sobic002G187900 Sobic009G088300 Sobic009G088300 Sobic001G492400--Sobic009G088300 Sobic004G173200 Sobic004G173200 Sobic001G492400--Sobic004G173200 Sobic001G370800 Sobic001G370800 Sobic001G492400--Sobic001G370800 Sobic001G492400--Sobic006G255200 Sobic003G225200 Sobic003G225200 Sobic001G492400--Sobic003G225200 Sobic001G492400--Sobic002G262850 Sobic001G492400--Sobic008G177100 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic006G249600 Sobic006G249600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic004G227700 Sobic004G227700 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G398600 Sobic002G398600 Sobic002G187900--Sobic002G398600 Sobic003G063400 Sobic003G063400 Sobic004G250400--Sobic003G063400 Sobic009G026600 Sobic009G026600 Sobic004G250400--Sobic009G026600 Sobic004G250400--Sobic004G227700 Sobic004G250400--Sobic001G370800 Sobic004G093700 Sobic004G093700 Sobic004G250400--Sobic004G093700 Sobic004G250400--Sobic004G058400 Sobic004G082600 Sobic004G082600 Sobic004G250400--Sobic004G082600 Sobic010G012200 Sobic010G012200 Sobic004G250400--Sobic010G012200 Sobic006G268900 Sobic006G268900 Sobic004G250400--Sobic006G268900 Sobic002G262850--Sobic009G088300 Sobic002G262850--Sobic001G492400 Sobic007G183600 Sobic007G183600 Sobic002G262850--Sobic007G183600 Sobic002G262850--Sobic001G424650 Sobic002G262850--Sobic008G177100 Sobic002G262850--Sobic004G250400 Sobic002G262850--Sobic003G063400 Sobic002G262850--Sobic003G263900 Sobic002G262850--Sobic002G187900 Sobic005G048700--Sobic001G212900 Sobic006G134300 Sobic006G134300 Sobic005G048700--Sobic006G134300 Sobic005G048700--Sobic008G177100 Sobic005G048700--Sobic006G249600 Sobic005G048700--Sobic004G127600 Sobic005G048700--Sobic002G187900 Sobic003G347560 Sobic003G347560 Sobic005G048700--Sobic003G347560 Sobic005G048700--Sobic003G263900 Sobic005G048700--Sobic002G374000 Sobic004G058400--Sobic004G250400 Sobic001G329001 Sobic001G329001 Sobic004G058400--Sobic001G329001 Sobic003G410000 Sobic003G410000 Sobic004G058400--Sobic003G410000 Sobic004G058400--Sobic008G177100 Sobic009G094200 Sobic009G094200 Sobic004G058400--Sobic009G094200 Sobic004G058400--Sobic006G134300 Sobic004G058400--Sobic004G082600 Sobic001G001800 Sobic001G001800 Sobic004G058400--Sobic001G001800 Sobic004G058400--Sobic004G227700 Sobic003G174500 Sobic003G174500 Sobic010G129100--Sobic003G174500 Sobic010G129100--Sobic009G088300 Sobic001G261452 Sobic001G261452 Sobic010G129100--Sobic001G261452 Sobic002G127300 Sobic002G127300 Sobic010G129100--Sobic002G127300 Sobic010G133450 Sobic010G133450 Sobic010G129100--Sobic010G133450 Sobic010G129100--Sobic001G442000 Sobic010G129100--Sobic004G127600 Sobic010G129100--Sobic006G255200 Sobic010G129100--Sobic001G370800 Sobic006G255200--Sobic002G187900 Sobic006G255200--Sobic003G263900 Sobic002G309300 Sobic002G309300 Sobic006G255200--Sobic002G309300 Sobic006G255200--Sobic001G442000 Sobic006G255200--Sobic004G127600 Sobic006G255200--Sobic004G072201 Sobic006G255200--Sobic001G109400 Sobic004G218400 Sobic004G218400 Sobic006G255200--Sobic004G218400 Sobic006G255200--Sobic001G370800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.