Gene annotation
Transcriptome id Sobic.005G048700.1,Sobic.005G048700.2
Synonym Sb05g003970
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt C5Y583 , A0A1Z5RGR0
Pfam PF16363 PF14934 PF01370 PF14934
Panther DB PTHR10366 PTHR10366:SF355
NCBI CDD KOG1430; C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G33630 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os02g48460.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a021808
Brachypodium KQK01015 , KQK01014 , PNT69311 , PNT69308 , PNT69309 , PNT69310
Barley HORVU6Hr1G070300.1 , HORVU6Hr1G070300.2 , HORVU6Hr1G070300.3 , HORVU6Hr1G070300.4
Wheat TraesCS6B02G308400 , TraesCS3D02G064500 , TraesCS6D02G260000 , TraesCS6A02G279600 , TraesCS6D02G049700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
2 Sobic.006G134300 - -
3 Sobic.008G177100 expressed protein -
4 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
5 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
6 Sobic.002G187900 expressed protein -
7 Sobic.003G347560 - -
8 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
9 Sobic.002G374000 - -
10 Sobic.002G262850 - -
11 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
12 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
13 Sobic.010G000200 expressed protein -
14 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
15 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
16 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
18 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
19 Sobic.006G255200 - -
20 Sobic.001G520000 auxin efflux carrier component, putative, expressed -


Gene co-expression network
sample Sobic005G048700 Sobic005G048700 Sobic001G212900 Sobic001G212900 Sobic005G048700--Sobic001G212900 Sobic006G134300 Sobic006G134300 Sobic005G048700--Sobic006G134300 Sobic008G177100 Sobic008G177100 Sobic005G048700--Sobic008G177100 Sobic006G249600 Sobic006G249600 Sobic005G048700--Sobic006G249600 Sobic004G127600 Sobic004G127600 Sobic005G048700--Sobic004G127600 Sobic002G187900 Sobic002G187900 Sobic005G048700--Sobic002G187900 Sobic003G347560 Sobic003G347560 Sobic005G048700--Sobic003G347560 Sobic003G263900 Sobic003G263900 Sobic005G048700--Sobic003G263900 Sobic002G374000 Sobic002G374000 Sobic005G048700--Sobic002G374000 Sobic001G109400 Sobic001G109400 Sobic001G212900--Sobic001G109400 Sobic001G212900--Sobic006G249600 Sobic001G212900--Sobic002G187900 Sobic001G212900--Sobic002G374000 Sobic010G000200 Sobic010G000200 Sobic001G212900--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic001G212900--Sobic002G110600 Sobic001G212900--Sobic004G127600 Sobic004G173200 Sobic004G173200 Sobic001G212900--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic001G212900--Sobic010G012200 Sobic006G134300--Sobic002G187900 Sobic006G134300--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic006G134300--Sobic004G227700 Sobic003G155000 Sobic003G155000 Sobic006G134300--Sobic003G155000 Sobic003G253700 Sobic003G253700 Sobic006G134300--Sobic003G253700 Sobic006G134300--Sobic003G263900 Sobic003G365200 Sobic003G365200 Sobic006G134300--Sobic003G365200 Sobic006G134300--Sobic004G127600 Sobic006G134300--Sobic001G212900 Sobic008G177100--Sobic004G127600 Sobic001G492400 Sobic001G492400 Sobic008G177100--Sobic001G492400 Sobic008G177100--Sobic002G187900 Sobic004G250400 Sobic004G250400 Sobic008G177100--Sobic004G250400 Sobic002G262850 Sobic002G262850 Sobic008G177100--Sobic002G262850 Sobic008G177100--Sobic005G048700 Sobic004G058400 Sobic004G058400 Sobic008G177100--Sobic004G058400 Sobic010G129100 Sobic010G129100 Sobic008G177100--Sobic010G129100 Sobic006G255200 Sobic006G255200 Sobic008G177100--Sobic006G255200 Sobic006G249600--Sobic001G212900 Sobic002G398600 Sobic002G398600 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic006G249600--Sobic001G109400 Sobic006G249600--Sobic004G173200 Sobic006G157450 Sobic006G157450 Sobic006G249600--Sobic006G157450 Sobic004G127600--Sobic002G187900 Sobic004G127600--Sobic003G263900 Sobic004G127600--Sobic006G255200 Sobic001G442000 Sobic001G442000 Sobic004G127600--Sobic001G442000 Sobic004G127600--Sobic001G212900 Sobic004G127600--Sobic001G109400 Sobic004G127600--Sobic002G374000 Sobic004G072201 Sobic004G072201 Sobic004G127600--Sobic004G072201 Sobic001G038700 Sobic001G038700 Sobic004G127600--Sobic001G038700 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic003G347560--Sobic006G134300 Sobic003G347560--Sobic005G048700 Sobic001G329001 Sobic001G329001 Sobic003G347560--Sobic001G329001 Sobic002G086700 Sobic002G086700 Sobic003G347560--Sobic002G086700 Sobic008G104400 Sobic008G104400 Sobic003G347560--Sobic008G104400 Sobic008G187500 Sobic008G187500 Sobic003G347560--Sobic008G187500 Sobic003G410000 Sobic003G410000 Sobic003G347560--Sobic003G410000 Sobic003G347560--Sobic004G058400 Sobic003G347560--Sobic008G177100 Sobic003G263900--Sobic002G187900 Sobic003G263900--Sobic001G038700 Sobic003G263900--Sobic006G255200 Sobic008G142200 Sobic008G142200 Sobic003G263900--Sobic008G142200 Sobic003G263900--Sobic004G127600 Sobic003G263900--Sobic002G398600 Sobic003G263900--Sobic006G249600 Sobic003G263900--Sobic004G227700 Sobic003G263900--Sobic004G072201 Sobic002G374000--Sobic004G072201 Sobic002G374000--Sobic001G109400 Sobic004G315400 Sobic004G315400 Sobic002G374000--Sobic004G315400 Sobic002G374000--Sobic001G212900 Sobic001G383200 Sobic001G383200 Sobic002G374000--Sobic001G383200 Sobic002G374000--Sobic004G127600 Sobic007G183600 Sobic007G183600 Sobic002G374000--Sobic007G183600 Sobic003G069601 Sobic003G069601 Sobic002G374000--Sobic003G069601 Sobic002G374000--Sobic010G012200
Octagon: transcription factors


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