Gene annotation
Transcriptome id Sobic.003G347560.1
Synonym -
Functional annotation -
UniProt A0A120GUM0 , C6JSH4
Pfam PF02178
Panther DB PTHR37384
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G58090 : Disease resistance-responsive (dirigent-like protein) family protein
RAP-DB (Rice) LOC_Os01g61890.2 : AT hook motif family protein, expressed
MaizeGDB (Corn) Zm00025a026961
Brachypodium -
Barley HORVU3Hr1G087220.4 , HORVU3Hr1G087220.5 , HORVU3Hr1G087220.1 , HORVU3Hr1G087220.2 , HORVU3Hr1G087220.3
Wheat TraesCS3A02G354100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G134300 - -
2 Sobic.005G048700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
3 Sobic.001G329001 - K03129: transcription initiation factor TFIID subunit 4
4 Sobic.002G086700 - -
5 Sobic.008G104400 ZOS12-05 - C2H2 zinc finger protein, expressed K09506: DnaJ homolog subfamily A member 5
6 Sobic.008G187500 bZIP transcription factor domain containing protein, expressed -
7 Sobic.003G410000 expressed protein -
8 Sobic.004G058400 RNA binding protein, putative, expressed -
9 Sobic.008G177100 expressed protein -
10 Sobic.009G149600 transmembrane protein 18, putative, expressed -
11 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
12 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
13 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
14 Sobic.003G365200 expressed protein -
15 Sobic.002G006001 - -
16 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
17 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
18 Sobic.009G064832 - -
19 Sobic.004G259900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G268900 "STKc_IRAK, catalytic domain of the serine/threonine kinases"(PubMedID : 29491869)@expressed protein -


Gene co-expression network
sample Sobic003G347560 Sobic003G347560 Sobic006G134300 Sobic006G134300 Sobic003G347560--Sobic006G134300 Sobic005G048700 Sobic005G048700 Sobic003G347560--Sobic005G048700 Sobic001G329001 Sobic001G329001 Sobic003G347560--Sobic001G329001 Sobic002G086700 Sobic002G086700 Sobic003G347560--Sobic002G086700 Sobic008G104400 Sobic008G104400 Sobic003G347560--Sobic008G104400 Sobic008G187500 Sobic008G187500 Sobic003G347560--Sobic008G187500 Sobic003G410000 Sobic003G410000 Sobic003G347560--Sobic003G410000 Sobic004G058400 Sobic004G058400 Sobic003G347560--Sobic004G058400 Sobic008G177100 Sobic008G177100 Sobic003G347560--Sobic008G177100 Sobic002G187900 Sobic002G187900 Sobic006G134300--Sobic002G187900 Sobic006G249600 Sobic006G249600 Sobic006G134300--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic006G134300--Sobic004G227700 Sobic003G155000 Sobic003G155000 Sobic006G134300--Sobic003G155000 Sobic003G253700 Sobic003G253700 Sobic006G134300--Sobic003G253700 Sobic003G263900 Sobic003G263900 Sobic006G134300--Sobic003G263900 Sobic003G365200 Sobic003G365200 Sobic006G134300--Sobic003G365200 Sobic004G127600 Sobic004G127600 Sobic006G134300--Sobic004G127600 Sobic001G212900 Sobic001G212900 Sobic006G134300--Sobic001G212900 Sobic005G048700--Sobic001G212900 Sobic005G048700--Sobic006G134300 Sobic005G048700--Sobic008G177100 Sobic005G048700--Sobic006G249600 Sobic005G048700--Sobic004G127600 Sobic005G048700--Sobic002G187900 Sobic005G048700--Sobic003G347560 Sobic005G048700--Sobic003G263900 Sobic002G374000 Sobic002G374000 Sobic005G048700--Sobic002G374000 Sobic001G329001--Sobic003G410000 Sobic001G329001--Sobic004G058400 Sobic001G329001--Sobic002G086700 Sobic002G257150 Sobic002G257150 Sobic001G329001--Sobic002G257150 Sobic002G076300 Sobic002G076300 Sobic001G329001--Sobic002G076300 Sobic001G329001--Sobic008G177100 Sobic010G195000 Sobic010G195000 Sobic001G329001--Sobic010G195000 Sobic001G329001--Sobic003G347560 Sobic001G329001--Sobic006G134300 Sobic004G358150 Sobic004G358150 Sobic002G086700--Sobic004G358150 Sobic002G086700--Sobic001G329001 Sobic002G086700--Sobic003G410000 Sobic002G086700--Sobic002G076300 Sobic002G244901 Sobic002G244901 Sobic002G086700--Sobic002G244901 Sobic002G086700--Sobic003G347560 Sobic001G498033 Sobic001G498033 Sobic002G086700--Sobic001G498033 Sobic006G151100 Sobic006G151100 Sobic002G086700--Sobic006G151100 Sobic003G375800 Sobic003G375800 Sobic002G086700--Sobic003G375800 Sobic001G517900 Sobic001G517900 Sobic008G104400--Sobic001G517900 Sobic008G104400--Sobic008G187500 Sobic008G104400--Sobic006G134300 Sobic003G386400 Sobic003G386400 Sobic008G104400--Sobic003G386400 Sobic009G175800 Sobic009G175800 Sobic008G104400--Sobic009G175800 Sobic006G268900 Sobic006G268900 Sobic008G104400--Sobic006G268900 Sobic002G287600 Sobic002G287600 Sobic008G104400--Sobic002G287600 Sobic008G104400--Sobic003G410000 Sobic008G104400--Sobic003G347560 Sobic008G187500--Sobic008G104400 Sobic008G187500--Sobic006G134300 Sobic008G187500--Sobic006G268900 Sobic008G187500--Sobic003G347560 Sobic008G187500--Sobic009G175800 Sobic008G187500--Sobic003G386400 Sobic009G064832 Sobic009G064832 Sobic008G187500--Sobic009G064832 Sobic008G187500--Sobic005G048700 Sobic009G094200 Sobic009G094200 Sobic008G187500--Sobic009G094200 Sobic003G410000--Sobic001G329001 Sobic003G410000--Sobic004G058400 Sobic003G410000--Sobic006G134300 Sobic010G133450 Sobic010G133450 Sobic003G410000--Sobic010G133450 Sobic010G129100 Sobic010G129100 Sobic003G410000--Sobic010G129100 Sobic001G492400 Sobic001G492400 Sobic003G410000--Sobic001G492400 Sobic003G410000--Sobic002G086700 Sobic003G410000--Sobic008G177100 Sobic004G250400 Sobic004G250400 Sobic003G410000--Sobic004G250400 Sobic004G058400--Sobic004G250400 Sobic004G058400--Sobic001G329001 Sobic004G058400--Sobic003G410000 Sobic004G058400--Sobic008G177100 Sobic004G058400--Sobic009G094200 Sobic004G058400--Sobic006G134300 Sobic004G082600 Sobic004G082600 Sobic004G058400--Sobic004G082600 Sobic001G001800 Sobic001G001800 Sobic004G058400--Sobic001G001800 Sobic004G058400--Sobic004G227700 Sobic008G177100--Sobic004G127600 Sobic008G177100--Sobic001G492400 Sobic008G177100--Sobic002G187900 Sobic008G177100--Sobic004G250400 Sobic002G262850 Sobic002G262850 Sobic008G177100--Sobic002G262850 Sobic008G177100--Sobic005G048700 Sobic008G177100--Sobic004G058400 Sobic008G177100--Sobic010G129100 Sobic006G255200 Sobic006G255200 Sobic008G177100--Sobic006G255200
Octagon: transcription factors


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