Gene annotation
Transcriptome id Sobic.004G259900.1
Synonym Sb04g029830
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XZV0
Pfam -
Panther DB PTHR33984 PTHR33984:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12070 : -
RAP-DB (Rice) LOC_Os02g48640.1 : expressed protein
MaizeGDB (Corn) Zm00025a021821
Brachypodium KQK01035
Barley HORVU6Hr1G070610.10 , HORVU6Hr1G070610.11 , HORVU6Hr1G070610.12 , HORVU6Hr1G070610.13 , HORVU6Hr1G070610.14 , HORVU6Hr1G070610.2 , HORVU6Hr1G070610.3 , HORVU6Hr1G070610.6 , HORVU6Hr1G070610.7 , HORVU6Hr1G070610.4 , HORVU6Hr1G070610.5 , HORVU6Hr1G070610.8 , HORVU6Hr1G070610.9
Wheat TraesCS6B02G309900 , TraesCS6D02G261400 , TraesCS6A02G281100
Populus -


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cDNA sequences
Sobic.004G259900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G134300 - -
2 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
3 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
4 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
5 Sobic.006G157450 - -
6 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
7 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
8 Sobic.005G048700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.008G177100 expressed protein -
11 Sobic.010G000200 expressed protein -
12 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
13 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
14 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
15 Sobic.002G187900 expressed protein -
16 Sobic.001G001800 expressed protein -
17 Sobic.002G206900 GEX2, putative, expressed -
18 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
19 Sobic.007G002500 OsFBT12 - F-box and tubby domain containing protein, expressed -
20 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -


Gene co-expression network
sample Sobic004G259900 Sobic004G259900 Sobic006G134300 Sobic006G134300 Sobic004G259900--Sobic006G134300 Sobic001G212900 Sobic001G212900 Sobic004G259900--Sobic001G212900 Sobic004G127600 Sobic004G127600 Sobic004G259900--Sobic004G127600 Sobic006G249600 Sobic006G249600 Sobic004G259900--Sobic006G249600 Sobic006G157450 Sobic006G157450 Sobic004G259900--Sobic006G157450 Sobic010G012200 Sobic010G012200 Sobic004G259900--Sobic010G012200 Sobic003G155000 Sobic003G155000 Sobic004G259900--Sobic003G155000 Sobic005G048700 Sobic005G048700 Sobic004G259900--Sobic005G048700 Sobic003G253700 Sobic003G253700 Sobic004G259900--Sobic003G253700 Sobic002G187900 Sobic002G187900 Sobic006G134300--Sobic002G187900 Sobic006G134300--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic006G134300--Sobic004G227700 Sobic006G134300--Sobic003G155000 Sobic006G134300--Sobic003G253700 Sobic003G263900 Sobic003G263900 Sobic006G134300--Sobic003G263900 Sobic003G365200 Sobic003G365200 Sobic006G134300--Sobic003G365200 Sobic006G134300--Sobic004G127600 Sobic006G134300--Sobic001G212900 Sobic001G109400 Sobic001G109400 Sobic001G212900--Sobic001G109400 Sobic001G212900--Sobic006G249600 Sobic001G212900--Sobic002G187900 Sobic002G374000 Sobic002G374000 Sobic001G212900--Sobic002G374000 Sobic010G000200 Sobic010G000200 Sobic001G212900--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic001G212900--Sobic002G110600 Sobic001G212900--Sobic004G127600 Sobic004G173200 Sobic004G173200 Sobic001G212900--Sobic004G173200 Sobic001G212900--Sobic010G012200 Sobic004G127600--Sobic002G187900 Sobic004G127600--Sobic003G263900 Sobic006G255200 Sobic006G255200 Sobic004G127600--Sobic006G255200 Sobic001G442000 Sobic001G442000 Sobic004G127600--Sobic001G442000 Sobic004G127600--Sobic001G212900 Sobic004G127600--Sobic001G109400 Sobic004G127600--Sobic002G374000 Sobic004G072201 Sobic004G072201 Sobic004G127600--Sobic004G072201 Sobic001G038700 Sobic001G038700 Sobic004G127600--Sobic001G038700 Sobic006G249600--Sobic001G212900 Sobic002G398600 Sobic002G398600 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic006G249600--Sobic001G109400 Sobic006G249600--Sobic004G173200 Sobic006G249600--Sobic006G157450 Sobic006G157450--Sobic001G038700 Sobic008G170800 Sobic008G170800 Sobic006G157450--Sobic008G170800 Sobic001G191500 Sobic001G191500 Sobic006G157450--Sobic001G191500 Sobic001G520000 Sobic001G520000 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic006G157450--Sobic003G253700 Sobic006G157450--Sobic003G155000 Sobic001G483001 Sobic001G483001 Sobic006G157450--Sobic001G483001 Sobic008G190600 Sobic008G190600 Sobic006G157450--Sobic008G190600 Sobic010G012200--Sobic001G520000 Sobic010G012200--Sobic003G155000 Sobic010G012200--Sobic003G253700 Sobic010G012200--Sobic001G038700 Sobic010G012200--Sobic008G170800 Sobic010G012200--Sobic006G157450 Sobic010G012200--Sobic010G000200 Sobic004G315400 Sobic004G315400 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic003G155000--Sobic003G253700 Sobic003G155000--Sobic001G520000 Sobic003G155000--Sobic010G012200 Sobic003G155000--Sobic003G365200 Sobic003G262600 Sobic003G262600 Sobic003G155000--Sobic003G262600 Sobic005G048800 Sobic005G048800 Sobic003G155000--Sobic005G048800 Sobic003G155000--Sobic006G249600 Sobic003G155000--Sobic008G170800 Sobic003G155000--Sobic006G157450 Sobic005G048700--Sobic001G212900 Sobic005G048700--Sobic006G134300 Sobic008G177100 Sobic008G177100 Sobic005G048700--Sobic008G177100 Sobic005G048700--Sobic006G249600 Sobic005G048700--Sobic004G127600 Sobic005G048700--Sobic002G187900 Sobic003G347560 Sobic003G347560 Sobic005G048700--Sobic003G347560 Sobic005G048700--Sobic003G263900 Sobic005G048700--Sobic002G374000 Sobic003G253700--Sobic003G155000 Sobic003G253700--Sobic001G520000 Sobic003G253700--Sobic003G365200 Sobic003G253700--Sobic010G012200 Sobic003G253700--Sobic006G249600 Sobic003G253700--Sobic006G157450 Sobic003G155800 Sobic003G155800 Sobic003G253700--Sobic003G155800 Sobic003G253700--Sobic008G170800 Sobic003G253700--Sobic003G262600
Octagon: transcription factors


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