Gene annotation
Transcriptome id Sobic.002G262850.1
Synonym -
Functional annotation -
UniProt A0A1W0W5T2
Pfam PF13405 PF00069
Panther DB PTHR24349 PTHR24349:SF127
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology -
Gene Ontology GO:0005509; calcium ion binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G74740 : calcium-dependent protein kinase 30
RAP-DB (Rice) LOC_Os09g33910.1 : CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a047650 , Zm00025a014340
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G088300 SHR5-receptor-like kinase, putative, expressed -
2 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
3 Sobic.007G183600 expressed protein -
4 Sobic.001G424650 - -
5 Sobic.008G177100 expressed protein -
6 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
7 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -
8 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
9 Sobic.002G187900 expressed protein -
10 Sobic.006G255200 - -
11 Sobic.001G370800 - -
12 Sobic.001G442000 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
13 Sobic.002G374000 - -
14 Sobic.003G069601 - -
15 Sobic.005G048700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
16 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.004G093700 tetraspanin family protein, putative, expressed -
18 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
19 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
20 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase


Gene co-expression network
sample Sobic002G262850 Sobic002G262850 Sobic009G088300 Sobic009G088300 Sobic002G262850--Sobic009G088300 Sobic001G492400 Sobic001G492400 Sobic002G262850--Sobic001G492400 Sobic007G183600 Sobic007G183600 Sobic002G262850--Sobic007G183600 Sobic001G424650 Sobic001G424650 Sobic002G262850--Sobic001G424650 Sobic008G177100 Sobic008G177100 Sobic002G262850--Sobic008G177100 Sobic004G250400 Sobic004G250400 Sobic002G262850--Sobic004G250400 Sobic003G063400 Sobic003G063400 Sobic002G262850--Sobic003G063400 Sobic003G263900 Sobic003G263900 Sobic002G262850--Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic002G262850--Sobic002G187900 Sobic009G088300--Sobic001G424650 Sobic010G129100 Sobic010G129100 Sobic009G088300--Sobic010G129100 Sobic001G370800 Sobic001G370800 Sobic009G088300--Sobic001G370800 Sobic001G442000 Sobic001G442000 Sobic009G088300--Sobic001G442000 Sobic006G255200 Sobic006G255200 Sobic009G088300--Sobic006G255200 Sobic009G088300--Sobic001G492400 Sobic001G334400 Sobic001G334400 Sobic009G088300--Sobic001G334400 Sobic009G088300--Sobic003G263900 Sobic009G088300--Sobic002G262850 Sobic001G492400--Sobic001G424650 Sobic001G492400--Sobic002G187900 Sobic001G492400--Sobic009G088300 Sobic004G173200 Sobic004G173200 Sobic001G492400--Sobic004G173200 Sobic001G492400--Sobic001G370800 Sobic001G492400--Sobic006G255200 Sobic003G225200 Sobic003G225200 Sobic001G492400--Sobic003G225200 Sobic001G492400--Sobic002G262850 Sobic001G492400--Sobic008G177100 Sobic003G069601 Sobic003G069601 Sobic007G183600--Sobic003G069601 Sobic004G072201 Sobic004G072201 Sobic007G183600--Sobic004G072201 Sobic002G374000 Sobic002G374000 Sobic007G183600--Sobic002G374000 Sobic004G093700 Sobic004G093700 Sobic007G183600--Sobic004G093700 Sobic004G068600 Sobic004G068600 Sobic007G183600--Sobic004G068600 Sobic001G383200 Sobic001G383200 Sobic007G183600--Sobic001G383200 Sobic007G183600--Sobic003G063400 Sobic007G183600--Sobic001G442000 Sobic009G026600 Sobic009G026600 Sobic007G183600--Sobic009G026600 Sobic001G424650--Sobic009G088300 Sobic001G424650--Sobic001G492400 Sobic005G110553 Sobic005G110553 Sobic001G424650--Sobic005G110553 Sobic001G424650--Sobic001G370800 Sobic001G424650--Sobic001G442000 Sobic009G122000 Sobic009G122000 Sobic001G424650--Sobic009G122000 Sobic001G424650--Sobic001G334400 Sobic004G224000 Sobic004G224000 Sobic001G424650--Sobic004G224000 Sobic001G424650--Sobic006G255200 Sobic004G127600 Sobic004G127600 Sobic008G177100--Sobic004G127600 Sobic008G177100--Sobic001G492400 Sobic008G177100--Sobic002G187900 Sobic008G177100--Sobic004G250400 Sobic008G177100--Sobic002G262850 Sobic005G048700 Sobic005G048700 Sobic008G177100--Sobic005G048700 Sobic004G058400 Sobic004G058400 Sobic008G177100--Sobic004G058400 Sobic008G177100--Sobic010G129100 Sobic008G177100--Sobic006G255200 Sobic004G250400--Sobic003G063400 Sobic004G250400--Sobic009G026600 Sobic004G227700 Sobic004G227700 Sobic004G250400--Sobic004G227700 Sobic004G250400--Sobic001G370800 Sobic004G250400--Sobic004G093700 Sobic004G250400--Sobic004G058400 Sobic004G082600 Sobic004G082600 Sobic004G250400--Sobic004G082600 Sobic010G012200 Sobic010G012200 Sobic004G250400--Sobic010G012200 Sobic006G268900 Sobic006G268900 Sobic004G250400--Sobic006G268900 Sobic003G063400--Sobic004G250400 Sobic003G063400--Sobic009G026600 Sobic003G063400--Sobic004G093700 Sobic003G063400--Sobic010G012200 Sobic003G063400--Sobic004G227700 Sobic003G063400--Sobic003G263900 Sobic003G063400--Sobic007G183600 Sobic010G100700 Sobic010G100700 Sobic003G063400--Sobic010G100700 Sobic008G142200 Sobic008G142200 Sobic003G063400--Sobic008G142200 Sobic003G263900--Sobic002G187900 Sobic001G038700 Sobic001G038700 Sobic003G263900--Sobic001G038700 Sobic003G263900--Sobic006G255200 Sobic003G263900--Sobic008G142200 Sobic003G263900--Sobic004G127600 Sobic002G398600 Sobic002G398600 Sobic003G263900--Sobic002G398600 Sobic006G249600 Sobic006G249600 Sobic003G263900--Sobic006G249600 Sobic003G263900--Sobic004G227700 Sobic003G263900--Sobic004G072201 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic001G109400 Sobic001G109400 Sobic002G187900--Sobic001G109400 Sobic001G212900 Sobic001G212900 Sobic002G187900--Sobic001G212900 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600
Octagon: transcription factors


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