Gene annotation
Transcriptome id Sobic.008G149650.1,Sobic.008G149650.2
Synonym -
Functional annotation -
UniProt A0A1Z5R7C6 , A0A1Z5R6T9
Pfam PF00249
Panther DB PTHR31496 PTHR31496:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32240 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g55760.1,LOC_Os12g40100.1 : expressed protein,MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a025219 , Zm00025a004498
Brachypodium KQK14134
Barley HORVU5Hr1G097900.9 , HORVU5Hr1G097900.7 , HORVU5Hr1G097900.4 , HORVU5Hr1G097900.2 , HORVU5Hr1G097900.3 , HORVU5Hr1G097900.1 , HORVU5Hr1G017410.9 , HORVU5Hr1G017410.1 , HORVU5Hr1G017410.2 , HORVU5Hr1G017410.3 , HORVU5Hr1G017410.5 , HORVU5Hr1G017410.7 , HORVU5Hr1G097900.10 , HORVU5Hr1G017410.13 , HORVU5Hr1G017410.10 , HORVU5Hr1G017410.11 , HORVU5Hr1G017410.14 , HORVU5Hr1G017410.15
Wheat TraesCS5A02G402800 , TraesCS5B02G068000 , TraesCS5B02G407600 , TraesCS5A02G064700 , TraesCS5D02G075600 , TraesCS5D02G412800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G339600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
2 Sobic.001G142200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
3 Sobic.001G106200 Homeobox domain containing protein, expressed -
4 Sobic.002G400600 Os7bglu26 - beta-mannosidase/glucosidase/exoglucanase, expressed K05350: beta-glucosidase
5 Sobic.010G049300 expressed protein -
6 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
7 Sobic.004G359500 expressed protein -
8 Sobic.010G095800 expressed protein -
9 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.002G071850 - -
11 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -
12 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
13 Sobic.007G189400 BEE 1, putative, expressed -
14 Sobic.002G203100 similar to Putative uncharacterized protein(PubMedID : 29862293)@CAMK_KIN1/SNF1/Nim1_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.009G254500 protein kinase, putative, expressed -
16 Sobic.002G115200 cysteine-rich repeat secretory protein precursor, putative, expressed -
17 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.005G029700 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
19 Sobic.009G037300 transferase family protein, putative, expressed -
20 Sobic.003G113500 MFS18 protein precursor, putative, expressed -


Gene co-expression network
sample Sobic008G149650 Sobic008G149650 Sobic003G339600 Sobic003G339600 Sobic008G149650--Sobic003G339600 Sobic001G142200 Sobic001G142200 Sobic008G149650--Sobic001G142200 Sobic001G106200 Sobic001G106200 Sobic008G149650--Sobic001G106200 Sobic002G400600 Sobic002G400600 Sobic008G149650--Sobic002G400600 Sobic010G049300 Sobic010G049300 Sobic008G149650--Sobic010G049300 Sobic003G356600 Sobic003G356600 Sobic008G149650--Sobic003G356600 Sobic004G359500 Sobic004G359500 Sobic008G149650--Sobic004G359500 Sobic010G095800 Sobic010G095800 Sobic008G149650--Sobic010G095800 Sobic001G221900 Sobic001G221900 Sobic008G149650--Sobic001G221900 Sobic010G020600 Sobic010G020600 Sobic003G339600--Sobic010G020600 Sobic003G300400 Sobic003G300400 Sobic003G339600--Sobic003G300400 Sobic009G254500 Sobic009G254500 Sobic003G339600--Sobic009G254500 Sobic004G248100 Sobic004G248100 Sobic003G339600--Sobic004G248100 Sobic002G229700 Sobic002G229700 Sobic003G339600--Sobic002G229700 Sobic004G283800 Sobic004G283800 Sobic003G339600--Sobic004G283800 Sobic003G309400 Sobic003G309400 Sobic003G339600--Sobic003G309400 Sobic002G382500 Sobic002G382500 Sobic003G339600--Sobic002G382500 Sobic007G189400 Sobic007G189400 Sobic003G339600--Sobic007G189400 Sobic001G142200--Sobic001G221900 Sobic001G142200--Sobic003G339600 Sobic009G235700 Sobic009G235700 Sobic001G142200--Sobic009G235700 Sobic003G360700 Sobic003G360700 Sobic001G142200--Sobic003G360700 Sobic001G267800 Sobic001G267800 Sobic001G142200--Sobic001G267800 Sobic001G142200--Sobic004G248100 Sobic001G142200--Sobic010G020600 Sobic010G010900 Sobic010G010900 Sobic001G142200--Sobic010G010900 Sobic007G165800 Sobic007G165800 Sobic001G142200--Sobic007G165800 Sobic001G106000 Sobic001G106000 Sobic001G106200--Sobic001G106000 Sobic002G010100 Sobic002G010100 Sobic001G106200--Sobic002G010100 Sobic003G040800 Sobic003G040800 Sobic001G106200--Sobic003G040800 Sobic002G023900 Sobic002G023900 Sobic001G106200--Sobic002G023900 Sobic001G145100 Sobic001G145100 Sobic001G106200--Sobic001G145100 Sobic002G267800 Sobic002G267800 Sobic001G106200--Sobic002G267800 Sobic007G153001 Sobic007G153001 Sobic001G106200--Sobic007G153001 Sobic001G430700 Sobic001G430700 Sobic001G106200--Sobic001G430700 Sobic001G450800 Sobic001G450800 Sobic001G106200--Sobic001G450800 Sobic002G400600--Sobic003G339600 Sobic004G274600 Sobic004G274600 Sobic002G400600--Sobic004G274600 Sobic003G070600 Sobic003G070600 Sobic002G400600--Sobic003G070600 Sobic002G400600--Sobic003G300400 Sobic003G113500 Sobic003G113500 Sobic002G400600--Sobic003G113500 Sobic004G211700 Sobic004G211700 Sobic002G400600--Sobic004G211700 Sobic002G400600--Sobic010G020600 Sobic002G400600--Sobic007G165800 Sobic008G097700 Sobic008G097700 Sobic002G400600--Sobic008G097700 Sobic008G192700 Sobic008G192700 Sobic010G049300--Sobic008G192700 Sobic002G162000 Sobic002G162000 Sobic010G049300--Sobic002G162000 Sobic002G419200 Sobic002G419200 Sobic010G049300--Sobic002G419200 Sobic005G204100 Sobic005G204100 Sobic010G049300--Sobic005G204100 Sobic001G385500 Sobic001G385500 Sobic010G049300--Sobic001G385500 Sobic006G272500 Sobic006G272500 Sobic010G049300--Sobic006G272500 Sobic006G202800 Sobic006G202800 Sobic010G049300--Sobic006G202800 Sobic010G049300--Sobic003G309400 Sobic001G408300 Sobic001G408300 Sobic010G049300--Sobic001G408300 Sobic003G356600--Sobic004G274600 Sobic003G356600--Sobic004G211700 Sobic002G363300 Sobic002G363300 Sobic003G356600--Sobic002G363300 Sobic001G199400 Sobic001G199400 Sobic003G356600--Sobic001G199400 Sobic008G008100 Sobic008G008100 Sobic003G356600--Sobic008G008100 Sobic009G146700 Sobic009G146700 Sobic003G356600--Sobic009G146700 Sobic003G356600--Sobic003G070600 Sobic002G312200 Sobic002G312200 Sobic003G356600--Sobic002G312200 Sobic010G014700 Sobic010G014700 Sobic003G356600--Sobic010G014700 Sobic006G058000 Sobic006G058000 Sobic004G359500--Sobic006G058000 Sobic007G160300 Sobic007G160300 Sobic004G359500--Sobic007G160300 Sobic010G173700 Sobic010G173700 Sobic004G359500--Sobic010G173700 Sobic004G359500--Sobic003G070600 Sobic001G470200 Sobic001G470200 Sobic004G359500--Sobic001G470200 Sobic001G390400 Sobic001G390400 Sobic004G359500--Sobic001G390400 Sobic005G032600 Sobic005G032600 Sobic004G359500--Sobic005G032600 Sobic004G359500--Sobic008G097700 Sobic001G473500 Sobic001G473500 Sobic004G359500--Sobic001G473500 Sobic010G095800--Sobic003G356600 Sobic002G416400 Sobic002G416400 Sobic010G095800--Sobic002G416400 Sobic006G167000 Sobic006G167000 Sobic010G095800--Sobic006G167000 Sobic007G076100 Sobic007G076100 Sobic010G095800--Sobic007G076100 Sobic003G178500 Sobic003G178500 Sobic010G095800--Sobic003G178500 Sobic010G095800--Sobic003G300400 Sobic002G115200 Sobic002G115200 Sobic010G095800--Sobic002G115200 Sobic005G218000 Sobic005G218000 Sobic010G095800--Sobic005G218000 Sobic009G141300 Sobic009G141300 Sobic010G095800--Sobic009G141300 Sobic001G221900--Sobic003G070600 Sobic001G221900--Sobic009G235700 Sobic001G221900--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic001G221900--Sobic010G078700 Sobic001G221900--Sobic003G339600 Sobic001G221900--Sobic001G199400 Sobic001G221900--Sobic004G248100 Sobic001G074000 Sobic001G074000 Sobic001G221900--Sobic001G074000 Sobic001G221900--Sobic003G113500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.