Gene annotation
Transcriptome id Sobic.002G203100.1
Synonym ATCIPK6, CIPK6, SNRK3.14, SIP3, Sb02g024780
Functional annotation similar to Putative uncharacterized protein (PubMedID : 29862293)
CAMK_KIN1/SNF1/Nim1_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7S4
Pfam PF03822 PF00069
Panther DB PTHR24347 PTHR24347:SF182
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G30960 : SOS3-interacting protein 3
RAP-DB (Rice) LOC_Os09g25100.1 : CAMK_KIN1/SNF1/Nim1_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a031165 , Zm00025a047006
Brachypodium PNT68191 , KQK09834
Barley HORVU4Hr1G021090.1 , HORVU4Hr1G021090.2 , HORVU5Hr1G065350.2 , HORVU5Hr1G065350.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G010100 "may play a role as a meristem identity gene, as does AP1 in Arabidopsis"(PubMedID : 9065695)@OsMADS15 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
2 Sobic.009G006600 auxin-induced protein 5NG4, putative, expressed -
3 Sobic.008G149650 - -
4 Sobic.002G353100 expressed protein -
5 Sobic.001G106200 Homeobox domain containing protein, expressed -
6 Sobic.002G267800 expressed protein -
7 Sobic.003G090650 - -
8 Sobic.005G024100 rhamnogalacturonate lyase, putative, expressed -
9 Sobic.001G307200 exonuclease, putative, expressed -
10 Sobic.004G309700 OsMan03 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
11 Sobic.005G110900 expressed protein -
12 Sobic.005G197200 - -
13 Sobic.006G042500 U-box domain-containing protein, putative, expressed -
14 Sobic.006G005800 expressed protein -
15 Sobic.006G005900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
16 Sobic.001G266100 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
17 Sobic.002G248300 polygalacturonase inhibitor 1 precursor, putative, expressed -
18 Sobic.006G281132 - -
19 Sobic.002G028201 - K10523: speckle-type POZ protein
20 Sobic.008G156100 ankyrin repeat domain-containing protein 44, putative, expressed -


Gene co-expression network
sample Sobic002G203100 Sobic002G203100 Sobic002G010100 Sobic002G010100 Sobic002G203100--Sobic002G010100 Sobic009G006600 Sobic009G006600 Sobic002G203100--Sobic009G006600 Sobic008G149650 Sobic008G149650 Sobic002G203100--Sobic008G149650 Sobic002G353100 Sobic002G353100 Sobic002G203100--Sobic002G353100 Sobic001G106200 Sobic001G106200 Sobic002G203100--Sobic001G106200 Sobic002G267800 Sobic002G267800 Sobic002G203100--Sobic002G267800 Sobic003G090650 Sobic003G090650 Sobic002G203100--Sobic003G090650 Sobic005G024100 Sobic005G024100 Sobic002G203100--Sobic005G024100 Sobic001G307200 Sobic001G307200 Sobic002G203100--Sobic001G307200 Sobic002G010100--Sobic001G106200 Sobic001G106000 Sobic001G106000 Sobic002G010100--Sobic001G106000 Sobic002G010100--Sobic002G203100 Sobic002G010100--Sobic001G307200 Sobic002G010100--Sobic002G267800 Sobic003G040800 Sobic003G040800 Sobic002G010100--Sobic003G040800 Sobic007G153001 Sobic007G153001 Sobic002G010100--Sobic007G153001 Sobic002G010100--Sobic009G006600 Sobic003G017200 Sobic003G017200 Sobic002G010100--Sobic003G017200 Sobic009G006600--Sobic002G203100 Sobic009G006600--Sobic002G010100 Sobic006G005700 Sobic006G005700 Sobic009G006600--Sobic006G005700 Sobic009G048600 Sobic009G048600 Sobic009G006600--Sobic009G048600 Sobic005G006000 Sobic005G006000 Sobic009G006600--Sobic005G006000 Sobic009G031400 Sobic009G031400 Sobic009G006600--Sobic009G031400 Sobic008G156100 Sobic008G156100 Sobic009G006600--Sobic008G156100 Sobic002G028201 Sobic002G028201 Sobic009G006600--Sobic002G028201 Sobic006G281132 Sobic006G281132 Sobic009G006600--Sobic006G281132 Sobic003G339600 Sobic003G339600 Sobic008G149650--Sobic003G339600 Sobic001G142200 Sobic001G142200 Sobic008G149650--Sobic001G142200 Sobic008G149650--Sobic001G106200 Sobic002G400600 Sobic002G400600 Sobic008G149650--Sobic002G400600 Sobic010G049300 Sobic010G049300 Sobic008G149650--Sobic010G049300 Sobic003G356600 Sobic003G356600 Sobic008G149650--Sobic003G356600 Sobic004G359500 Sobic004G359500 Sobic008G149650--Sobic004G359500 Sobic010G095800 Sobic010G095800 Sobic008G149650--Sobic010G095800 Sobic001G221900 Sobic001G221900 Sobic008G149650--Sobic001G221900 Sobic002G353100--Sobic003G090650 Sobic006G005800 Sobic006G005800 Sobic002G353100--Sobic006G005800 Sobic005G110900 Sobic005G110900 Sobic002G353100--Sobic005G110900 Sobic001G266100 Sobic001G266100 Sobic002G353100--Sobic001G266100 Sobic003G382400 Sobic003G382400 Sobic002G353100--Sobic003G382400 Sobic002G248300 Sobic002G248300 Sobic002G353100--Sobic002G248300 Sobic006G042500 Sobic006G042500 Sobic002G353100--Sobic006G042500 Sobic005G006500 Sobic005G006500 Sobic002G353100--Sobic005G006500 Sobic006G005900 Sobic006G005900 Sobic002G353100--Sobic006G005900 Sobic001G106200--Sobic001G106000 Sobic001G106200--Sobic002G010100 Sobic001G106200--Sobic003G040800 Sobic002G023900 Sobic002G023900 Sobic001G106200--Sobic002G023900 Sobic001G145100 Sobic001G145100 Sobic001G106200--Sobic001G145100 Sobic001G106200--Sobic002G267800 Sobic001G106200--Sobic007G153001 Sobic001G430700 Sobic001G430700 Sobic001G106200--Sobic001G430700 Sobic001G450800 Sobic001G450800 Sobic001G106200--Sobic001G450800 Sobic002G267800--Sobic001G430700 Sobic002G267800--Sobic001G106000 Sobic002G267800--Sobic003G040800 Sobic002G267800--Sobic001G450800 Sobic002G267800--Sobic001G106200 Sobic003G141800 Sobic003G141800 Sobic002G267800--Sobic003G141800 Sobic002G267800--Sobic001G307200 Sobic004G285100 Sobic004G285100 Sobic002G267800--Sobic004G285100 Sobic002G267800--Sobic003G017200 Sobic003G090650--Sobic002G353100 Sobic003G090650--Sobic006G005800 Sobic003G090650--Sobic002G248300 Sobic003G090650--Sobic005G110900 Sobic003G090650--Sobic006G042500 Sobic004G309700 Sobic004G309700 Sobic003G090650--Sobic004G309700 Sobic003G090650--Sobic006G005900 Sobic003G090650--Sobic005G006500 Sobic002G183800 Sobic002G183800 Sobic003G090650--Sobic002G183800 Sobic005G024100--Sobic002G267800 Sobic010G167200 Sobic010G167200 Sobic005G024100--Sobic010G167200 Sobic005G024100--Sobic001G430700 Sobic005G024100--Sobic002G203100 Sobic010G226300 Sobic010G226300 Sobic005G024100--Sobic010G226300 Sobic001G480000 Sobic001G480000 Sobic005G024100--Sobic001G480000 Sobic006G115200 Sobic006G115200 Sobic005G024100--Sobic006G115200 Sobic005G024100--Sobic001G106200 Sobic004G303400 Sobic004G303400 Sobic005G024100--Sobic004G303400 Sobic001G307200--Sobic001G430700 Sobic001G307200--Sobic001G106000 Sobic001G307200--Sobic001G450800 Sobic001G307200--Sobic003G040800 Sobic004G257350 Sobic004G257350 Sobic001G307200--Sobic004G257350 Sobic010G260300 Sobic010G260300 Sobic001G307200--Sobic010G260300 Sobic001G307200--Sobic002G267800 Sobic001G307200--Sobic004G285100 Sobic003G233900 Sobic003G233900 Sobic001G307200--Sobic003G233900
Octagon: transcription factors


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