Gene annotation
Transcriptome id Sobic.009G043200.1
Synonym Sb09g003650
Functional annotation BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
UniProt C5Z022
Pfam -
Panther DB PTHR32370 PTHR32370:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30440 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os08g03650.1 : BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
MaizeGDB (Corn) Zm00025a040402
Brachypodium KQJ94960 , KQJ94959 , KQJ85800
Barley HORVU5Hr1G010370.1 , HORVU5Hr1G010370.2 , HORVU5Hr1G010370.9 , HORVU7Hr1G073650.1
Wheat TraesCS5B02G046200 , TraesCS5B02G046200 , TraesCS5D02G051100 , TraesCS5A02G042600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G086100 - -
2 Sobic.001G169000 expressed protein -
3 Sobic.004G162600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
4 Sobic.004G096000 - -
5 Sobic.001G351200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ICE-like protease p20 domain containing protein, putative, expressed -
6 Sobic.004G293600 OsFBX15 - F-box domain containing protein, expressed -
7 Sobic.002G334900 S-domain receptor-like protein kinase, putative, expressed -
8 Sobic.003G250340 - K07976: Rab family, other
9 Sobic.009G187900 ethylene-responsive protein related, putative, expressed -
10 Sobic.003G352750 - -
11 Sobic.003G130100 expressed protein -
12 Sobic.004G087900 - -
13 Sobic.002G345100 expressed protein -
14 Sobic.007G180800 - -
15 Sobic.003G333150 - -
16 Sobic.004G328800 transferase family protein, putative, expressed -
17 Sobic.008G045300 citrate-binding protein precursor, putative, expressed -
18 Sobic.009G203600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Receptor-like protein kinase HSL1(PubMedID : 31721651)@receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.010G196200 OsSub51 - Putative Subtilisin homologue, expressed -
20 Sobic.002G096800 OsFBX209 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic009G043200 Sobic009G043200 Sobic001G086100 Sobic001G086100 Sobic009G043200--Sobic001G086100 Sobic001G169000 Sobic001G169000 Sobic009G043200--Sobic001G169000 Sobic004G162600 Sobic004G162600 Sobic009G043200--Sobic004G162600 Sobic004G096000 Sobic004G096000 Sobic009G043200--Sobic004G096000 Sobic001G351200 Sobic001G351200 Sobic009G043200--Sobic001G351200 Sobic004G293600 Sobic004G293600 Sobic009G043200--Sobic004G293600 Sobic002G334900 Sobic002G334900 Sobic009G043200--Sobic002G334900 Sobic003G250340 Sobic003G250340 Sobic009G043200--Sobic003G250340 Sobic009G187900 Sobic009G187900 Sobic009G043200--Sobic009G187900 Sobic001G086100--Sobic004G293600 Sobic002G345100 Sobic002G345100 Sobic001G086100--Sobic002G345100 Sobic002G046400 Sobic002G046400 Sobic001G086100--Sobic002G046400 Sobic005G025500 Sobic005G025500 Sobic001G086100--Sobic005G025500 Sobic003G002800 Sobic003G002800 Sobic001G086100--Sobic003G002800 Sobic004G328800 Sobic004G328800 Sobic001G086100--Sobic004G328800 Sobic006G144900 Sobic006G144900 Sobic001G086100--Sobic006G144900 Sobic009G142600 Sobic009G142600 Sobic001G086100--Sobic009G142600 Sobic005G014600 Sobic005G014600 Sobic001G086100--Sobic005G014600 Sobic001G169000--Sobic004G293600 Sobic001G169000--Sobic001G086100 Sobic003G333150 Sobic003G333150 Sobic001G169000--Sobic003G333150 Sobic001G169000--Sobic009G043200 Sobic008G045300 Sobic008G045300 Sobic001G169000--Sobic008G045300 Sobic009G203600 Sobic009G203600 Sobic001G169000--Sobic009G203600 Sobic001G169000--Sobic006G144900 Sobic003G130650 Sobic003G130650 Sobic001G169000--Sobic003G130650 Sobic001G169000--Sobic002G345100 Sobic004G162600--Sobic009G187900 Sobic004G205400 Sobic004G205400 Sobic004G162600--Sobic004G205400 Sobic006G260101 Sobic006G260101 Sobic004G162600--Sobic006G260101 Sobic004G162600--Sobic003G250340 Sobic004G162600--Sobic009G043200 Sobic010G196200 Sobic010G196200 Sobic004G162600--Sobic010G196200 Sobic005G116601 Sobic005G116601 Sobic004G162600--Sobic005G116601 Sobic004G162600--Sobic002G334900 Sobic004G162600--Sobic004G096000 Sobic003G352750 Sobic003G352750 Sobic004G096000--Sobic003G352750 Sobic009G162550 Sobic009G162550 Sobic004G096000--Sobic009G162550 Sobic004G096000--Sobic009G043200 Sobic004G096000--Sobic004G162600 Sobic004G096000--Sobic001G086100 Sobic004G096000--Sobic009G187900 Sobic001G336600 Sobic001G336600 Sobic004G096000--Sobic001G336600 Sobic004G096000--Sobic001G169000 Sobic003G017300 Sobic003G017300 Sobic004G096000--Sobic003G017300 Sobic001G351200--Sobic009G043200 Sobic002G096800 Sobic002G096800 Sobic001G351200--Sobic002G096800 Sobic001G351200--Sobic001G086100 Sobic001G351200--Sobic004G096000 Sobic001G351200--Sobic004G162600 Sobic004G087900 Sobic004G087900 Sobic001G351200--Sobic004G087900 Sobic001G351200--Sobic002G334900 Sobic003G315900 Sobic003G315900 Sobic001G351200--Sobic003G315900 Sobic001G351200--Sobic001G169000 Sobic004G293600--Sobic001G086100 Sobic004G293600--Sobic002G345100 Sobic004G293600--Sobic006G144900 Sobic004G293600--Sobic003G002800 Sobic004G293600--Sobic008G045300 Sobic010G273200 Sobic010G273200 Sobic004G293600--Sobic010G273200 Sobic002G103400 Sobic002G103400 Sobic004G293600--Sobic002G103400 Sobic001G152240 Sobic001G152240 Sobic004G293600--Sobic001G152240 Sobic010G091750 Sobic010G091750 Sobic004G293600--Sobic010G091750 Sobic002G334900--Sobic010G196200 Sobic002G334900--Sobic003G250340 Sobic002G334900--Sobic001G086100 Sobic002G334900--Sobic009G187900 Sobic002G334900--Sobic008G045300 Sobic002G334900--Sobic004G328800 Sobic002G334900--Sobic004G293600 Sobic002G334900--Sobic004G162600 Sobic002G334900--Sobic001G169000 Sobic003G250340--Sobic010G196200 Sobic003G250340--Sobic008G045300 Sobic005G038700 Sobic005G038700 Sobic003G250340--Sobic005G038700 Sobic003G250340--Sobic003G130650 Sobic003G250340--Sobic009G203600 Sobic010G118600 Sobic010G118600 Sobic003G250340--Sobic010G118600 Sobic007G114650 Sobic007G114650 Sobic003G250340--Sobic007G114650 Sobic003G250340--Sobic009G187900 Sobic003G250340--Sobic003G333150 Sobic009G187900--Sobic004G162600 Sobic009G187900--Sobic003G250340 Sobic001G087500 Sobic001G087500 Sobic009G187900--Sobic001G087500 Sobic009G187900--Sobic005G038700 Sobic010G278400 Sobic010G278400 Sobic009G187900--Sobic010G278400 Sobic004G244500 Sobic004G244500 Sobic009G187900--Sobic004G244500 Sobic009G187900--Sobic006G260101 Sobic009G187900--Sobic002G334900 Sobic009G187900--Sobic004G205400
Octagon: transcription factors


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