Gene annotation
Transcriptome id Sobic.002G096800.1
Synonym Sb02g007965
Functional annotation OsFBX209 - F-box domain containing protein, expressed
UniProt A0A1B6QA89
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G10430 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os07g02890.1 : OsFBX209 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G096800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G351200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ICE-like protease p20 domain containing protein, putative, expressed -
2 Sobic.009G043200 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
3 Sobic.004G087900 - -
4 Sobic.004G096000 - -
5 Sobic.004G162600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
6 Sobic.001G086100 - -
7 Sobic.001G171850 - -
8 Sobic.009G106300 - -
9 Sobic.003G315900 - -
10 Sobic.002G334900 S-domain receptor-like protein kinase, putative, expressed -
11 Sobic.010G251800 DUF617 domain containing protein, expressed -
12 Sobic.010G242200 expressed protein -
13 Sobic.003G352750 - -
14 Sobic.004G193200 tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
15 Sobic.006G019000 expressed protein -
16 Sobic.001G169000 expressed protein -
17 Sobic.004G293600 OsFBX15 - F-box domain containing protein, expressed -
18 Sobic.006G260101 - -
19 Sobic.009G187900 ethylene-responsive protein related, putative, expressed -
20 Sobic.003G384800 pectinacetylesterase domain containing protein, expressed -


Gene co-expression network
sample Sobic002G096800 Sobic002G096800 Sobic001G351200 Sobic001G351200 Sobic002G096800--Sobic001G351200 Sobic009G043200 Sobic009G043200 Sobic002G096800--Sobic009G043200 Sobic004G087900 Sobic004G087900 Sobic002G096800--Sobic004G087900 Sobic004G096000 Sobic004G096000 Sobic002G096800--Sobic004G096000 Sobic004G162600 Sobic004G162600 Sobic002G096800--Sobic004G162600 Sobic001G086100 Sobic001G086100 Sobic002G096800--Sobic001G086100 Sobic001G171850 Sobic001G171850 Sobic002G096800--Sobic001G171850 Sobic009G106300 Sobic009G106300 Sobic002G096800--Sobic009G106300 Sobic003G315900 Sobic003G315900 Sobic002G096800--Sobic003G315900 Sobic001G351200--Sobic009G043200 Sobic001G351200--Sobic002G096800 Sobic001G351200--Sobic001G086100 Sobic001G351200--Sobic004G096000 Sobic001G351200--Sobic004G162600 Sobic001G351200--Sobic004G087900 Sobic002G334900 Sobic002G334900 Sobic001G351200--Sobic002G334900 Sobic001G351200--Sobic003G315900 Sobic001G169000 Sobic001G169000 Sobic001G351200--Sobic001G169000 Sobic009G043200--Sobic001G086100 Sobic009G043200--Sobic001G169000 Sobic009G043200--Sobic004G162600 Sobic009G043200--Sobic004G096000 Sobic009G043200--Sobic001G351200 Sobic004G293600 Sobic004G293600 Sobic009G043200--Sobic004G293600 Sobic009G043200--Sobic002G334900 Sobic003G250340 Sobic003G250340 Sobic009G043200--Sobic003G250340 Sobic009G187900 Sobic009G187900 Sobic009G043200--Sobic009G187900 Sobic004G087900--Sobic003G315900 Sobic004G087900--Sobic009G106300 Sobic009G005750 Sobic009G005750 Sobic004G087900--Sobic009G005750 Sobic010G251800 Sobic010G251800 Sobic004G087900--Sobic010G251800 Sobic001G227601 Sobic001G227601 Sobic004G087900--Sobic001G227601 Sobic006G019000 Sobic006G019000 Sobic004G087900--Sobic006G019000 Sobic002G295550 Sobic002G295550 Sobic004G087900--Sobic002G295550 Sobic003G232200 Sobic003G232200 Sobic004G087900--Sobic003G232200 Sobic003G017300 Sobic003G017300 Sobic004G087900--Sobic003G017300 Sobic003G352750 Sobic003G352750 Sobic004G096000--Sobic003G352750 Sobic009G162550 Sobic009G162550 Sobic004G096000--Sobic009G162550 Sobic004G096000--Sobic009G043200 Sobic004G096000--Sobic004G162600 Sobic004G096000--Sobic001G086100 Sobic004G096000--Sobic009G187900 Sobic001G336600 Sobic001G336600 Sobic004G096000--Sobic001G336600 Sobic004G096000--Sobic001G169000 Sobic004G096000--Sobic003G017300 Sobic004G162600--Sobic009G187900 Sobic004G205400 Sobic004G205400 Sobic004G162600--Sobic004G205400 Sobic006G260101 Sobic006G260101 Sobic004G162600--Sobic006G260101 Sobic004G162600--Sobic003G250340 Sobic004G162600--Sobic009G043200 Sobic010G196200 Sobic010G196200 Sobic004G162600--Sobic010G196200 Sobic005G116601 Sobic005G116601 Sobic004G162600--Sobic005G116601 Sobic004G162600--Sobic002G334900 Sobic004G162600--Sobic004G096000 Sobic001G086100--Sobic004G293600 Sobic002G345100 Sobic002G345100 Sobic001G086100--Sobic002G345100 Sobic002G046400 Sobic002G046400 Sobic001G086100--Sobic002G046400 Sobic005G025500 Sobic005G025500 Sobic001G086100--Sobic005G025500 Sobic003G002800 Sobic003G002800 Sobic001G086100--Sobic003G002800 Sobic004G328800 Sobic004G328800 Sobic001G086100--Sobic004G328800 Sobic006G144900 Sobic006G144900 Sobic001G086100--Sobic006G144900 Sobic009G142600 Sobic009G142600 Sobic001G086100--Sobic009G142600 Sobic005G014600 Sobic005G014600 Sobic001G086100--Sobic005G014600 Sobic007G051501 Sobic007G051501 Sobic001G171850--Sobic007G051501 Sobic001G172900 Sobic001G172900 Sobic001G171850--Sobic001G172900 Sobic001G171850--Sobic006G019000 Sobic003G288900 Sobic003G288900 Sobic001G171850--Sobic003G288900 Sobic002G034400 Sobic002G034400 Sobic001G171850--Sobic002G034400 Sobic001G171850--Sobic010G251800 Sobic008G023500 Sobic008G023500 Sobic001G171850--Sobic008G023500 Sobic006G228400 Sobic006G228400 Sobic001G171850--Sobic006G228400 Sobic006G209100 Sobic006G209100 Sobic001G171850--Sobic006G209100 Sobic009G106300--Sobic004G087900 Sobic009G106300--Sobic003G017300 Sobic006G269300 Sobic006G269300 Sobic009G106300--Sobic006G269300 Sobic009G106300--Sobic009G005750 Sobic009G106300--Sobic006G260101 Sobic009G106300--Sobic003G315900 Sobic002G359200 Sobic002G359200 Sobic009G106300--Sobic002G359200 Sobic009G054200 Sobic009G054200 Sobic009G106300--Sobic009G054200 Sobic001G061000 Sobic001G061000 Sobic009G106300--Sobic001G061000 Sobic003G315900--Sobic004G087900 Sobic003G315900--Sobic010G251800 Sobic003G315900--Sobic001G227601 Sobic003G315900--Sobic009G106300 Sobic003G315900--Sobic006G019000 Sobic003G315900--Sobic003G232200 Sobic003G315900--Sobic009G005750 Sobic003G315900--Sobic002G295550 Sobic006G153550 Sobic006G153550 Sobic003G315900--Sobic006G153550
Octagon: transcription factors


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