Gene annotation
Transcriptome id Sobic.009G118700.1
Synonym Sb09g018640, CKX1, ATCKX1
Functional annotation cytokinin dehydrogenase precursor, putative, expressed
UniProt C5YX99
Pfam PF01565 PF09265
Panther DB PTHR13878 PTHR13878:SF61
NCBI CDD -
KEGG Orthology K00279; cytokinin dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0009690cytokinin metabolic process


Orthologs (automatic annotation)
TAIR AT2G41510 : cytokinin oxidase/dehydrogenase 1
RAP-DB (Rice) LOC_Os05g31040.1 : cytokinin dehydrogenase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039159
Brachypodium KQK06589
Barley HORVU1Hr1G057860.9 , HORVU1Hr1G057860.5 , HORVU1Hr1G057860.4 , HORVU1Hr1G057860.7 , HORVU1Hr1G057860.6 , HORVU1Hr1G057860.1 , HORVU1Hr1G057860.3 , HORVU1Hr1G057860.8 , HORVU1Hr1G057860.11 , HORVU1Hr1G057860.10 , HORVU1Hr1G057860.13 , HORVU1Hr1G057860.12 , HORVU1Hr1G057860.15 , HORVU1Hr1G057860.14 , HORVU1Hr1G057860.17 , HORVU1Hr1G057860.16
Wheat TraesCS1D02G237200 , TraesCS1A02G234800 , TraesCS1B02G248700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G156401 - -
2 Sobic.001G519200 expressed protein -
3 Sobic.002G030001 - -
4 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
5 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
6 Sobic.009G170301 - -
7 Sobic.010G217001 - -
8 Sobic.008G143901 - -
9 Sobic.001G312801 - -
10 Sobic.001G494400 DUF593 domain containing protein, expressed -
11 Sobic.003G298000 - -
12 Sobic.002G231400 - -
13 Sobic.001G139800 growth regulating factor protein, putative, expressed -
14 Sobic.003G043650 - -
15 Sobic.002G076932 - -
16 Sobic.004G047001 - -
17 Sobic.001G010900 OsGrx_S14 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
18 Sobic.010G041500 dual specificity protein phosphatase, putative, expressed -
19 Sobic.002G380150 - -
20 Sobic.004G288900 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic009G118700 Sobic009G118700 Sobic001G156401 Sobic001G156401 Sobic009G118700--Sobic001G156401 Sobic001G519200 Sobic001G519200 Sobic009G118700--Sobic001G519200 Sobic002G030001 Sobic002G030001 Sobic009G118700--Sobic002G030001 Sobic002G395900 Sobic002G395900 Sobic009G118700--Sobic002G395900 Sobic006G243000 Sobic006G243000 Sobic009G118700--Sobic006G243000 Sobic009G170301 Sobic009G170301 Sobic009G118700--Sobic009G170301 Sobic010G217001 Sobic010G217001 Sobic009G118700--Sobic010G217001 Sobic008G143901 Sobic008G143901 Sobic009G118700--Sobic008G143901 Sobic001G312801 Sobic001G312801 Sobic009G118700--Sobic001G312801 Sobic001G156401--Sobic009G118700 Sobic001G494400 Sobic001G494400 Sobic001G156401--Sobic001G494400 Sobic001G156401--Sobic008G143901 Sobic004G257900 Sobic004G257900 Sobic001G156401--Sobic004G257900 Sobic001G156401--Sobic006G243000 Sobic001G139800 Sobic001G139800 Sobic001G156401--Sobic001G139800 Sobic002G413700 Sobic002G413700 Sobic001G156401--Sobic002G413700 Sobic001G156401--Sobic002G395900 Sobic010G219700 Sobic010G219700 Sobic001G156401--Sobic010G219700 Sobic001G519200--Sobic009G118700 Sobic001G519200--Sobic009G170301 Sobic004G102301 Sobic004G102301 Sobic001G519200--Sobic004G102301 Sobic009G235100 Sobic009G235100 Sobic001G519200--Sobic009G235100 Sobic001G519200--Sobic002G030001 Sobic002G312600 Sobic002G312600 Sobic001G519200--Sobic002G312600 Sobic002G380150 Sobic002G380150 Sobic001G519200--Sobic002G380150 Sobic002G076932 Sobic002G076932 Sobic001G519200--Sobic002G076932 Sobic001G519200--Sobic002G395900 Sobic005G083866 Sobic005G083866 Sobic002G030001--Sobic005G083866 Sobic002G030001--Sobic002G380150 Sobic004G200000 Sobic004G200000 Sobic002G030001--Sobic004G200000 Sobic002G030001--Sobic010G217001 Sobic007G016300 Sobic007G016300 Sobic002G030001--Sobic007G016300 Sobic002G018133 Sobic002G018133 Sobic002G030001--Sobic002G018133 Sobic003G043650 Sobic003G043650 Sobic002G030001--Sobic003G043650 Sobic002G030001--Sobic009G118700 Sobic002G030001--Sobic002G076932 Sobic009G045100 Sobic009G045100 Sobic002G395900--Sobic009G045100 Sobic005G094500 Sobic005G094500 Sobic002G395900--Sobic005G094500 Sobic003G202900 Sobic003G202900 Sobic002G395900--Sobic003G202900 Sobic007G017300 Sobic007G017300 Sobic002G395900--Sobic007G017300 Sobic001G368000 Sobic001G368000 Sobic002G395900--Sobic001G368000 Sobic002G395900--Sobic009G170301 Sobic001G468200 Sobic001G468200 Sobic002G395900--Sobic001G468200 Sobic003G155350 Sobic003G155350 Sobic002G395900--Sobic003G155350 Sobic001G176800 Sobic001G176800 Sobic002G395900--Sobic001G176800 Sobic006G243000--Sobic008G143901 Sobic001G096200 Sobic001G096200 Sobic006G243000--Sobic001G096200 Sobic006G213350 Sobic006G213350 Sobic006G243000--Sobic006G213350 Sobic006G243000--Sobic002G395900 Sobic001G483001 Sobic001G483001 Sobic006G243000--Sobic001G483001 Sobic001G520000 Sobic001G520000 Sobic006G243000--Sobic001G520000 Sobic004G026000 Sobic004G026000 Sobic006G243000--Sobic004G026000 Sobic006G243000--Sobic009G045100 Sobic001G018550 Sobic001G018550 Sobic006G243000--Sobic001G018550 Sobic009G170301--Sobic002G076932 Sobic009G170301--Sobic005G094500 Sobic010G041500 Sobic010G041500 Sobic009G170301--Sobic010G041500 Sobic009G170301--Sobic001G368000 Sobic009G170301--Sobic003G202900 Sobic009G170301--Sobic002G395900 Sobic009G170301--Sobic001G468200 Sobic001G490600 Sobic001G490600 Sobic009G170301--Sobic001G490600 Sobic009G170301--Sobic007G017300 Sobic010G217001--Sobic002G018133 Sobic007G081400 Sobic007G081400 Sobic010G217001--Sobic007G081400 Sobic002G231400 Sobic002G231400 Sobic010G217001--Sobic002G231400 Sobic010G217001--Sobic002G030001 Sobic010G217001--Sobic005G083866 Sobic004G288900 Sobic004G288900 Sobic010G217001--Sobic004G288900 Sobic010G217001--Sobic003G043650 Sobic002G138200 Sobic002G138200 Sobic010G217001--Sobic002G138200 Sobic001G316500 Sobic001G316500 Sobic010G217001--Sobic001G316500 Sobic008G143901--Sobic001G483001 Sobic008G143901--Sobic006G243000 Sobic008G143901--Sobic006G213350 Sobic008G143901--Sobic002G413700 Sobic008G143901--Sobic001G520000 Sobic008G160100 Sobic008G160100 Sobic008G143901--Sobic008G160100 Sobic008G143901--Sobic001G139800 Sobic008G143901--Sobic001G096200 Sobic008G143901--Sobic001G156401 Sobic001G312801--Sobic004G288900 Sobic001G312801--Sobic001G490600 Sobic001G312801--Sobic001G368000 Sobic009G184500 Sobic009G184500 Sobic001G312801--Sobic009G184500 Sobic004G190800 Sobic004G190800 Sobic001G312801--Sobic004G190800 Sobic001G312801--Sobic007G017300 Sobic001G312801--Sobic009G170301 Sobic008G096300 Sobic008G096300 Sobic001G312801--Sobic008G096300 Sobic001G312801--Sobic002G138200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.