Gene annotation
Transcriptome id Sobic.009G173700.1
Synonym ATEXPA1, ATEXP1, EXP1, AT-EXP1, Sb09g023440, ATHEXPALPHA1.2, EXPA1
Functional annotation expansin precursor, putative, expressed
UniProt C5YZS5
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69530 : expansin A1
RAP-DB (Rice) LOC_Os05g39990.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a000709 , Zm00025a027043 , Zm00025a043994 , Zm00025a008818 , Zm00025a033209 , Zm00025a006817 , Zm00025a019850 , Zm00025a019851 , Zm00025a019852 , Zm00025a006808 , Zm00025a019849 , Zm00025a055602 , Zm00025a016421 , Zm00025a022026 , Zm00025a053441
Brachypodium KQJ81960 , KQJ96856 , KQJ96857 , KQJ96854 , KQK23578 , KQK23579 , KQK01952 , KQK10365 , KQK05753 , KQK21504
Barley HORVU1Hr1G036910.1 , HORVU1Hr1G069830.2 , HORVU1Hr1G069830.1 , HORVU1Hr1G069830.7 , HORVU1Hr1G069830.6 , HORVU1Hr1G069830.5 , HORVU1Hr1G069830.4 , HORVU3Hr1G034030.4 , HORVU3Hr1G081180.4 , HORVU3Hr1G081180.3 , HORVU3Hr1G081180.2 , HORVU3Hr1G081180.1 , HORVU3Hr1G081230.9 , HORVU3Hr1G081230.8 , HORVU3Hr1G081230.5 , HORVU3Hr1G081230.3 , HORVU3Hr1G081230.2 , HORVU5Hr1G113580.4 , HORVU3Hr1G075210.1 , HORVU3Hr1G075210.2 , HORVU2Hr1G010800.1 , HORVU5Hr1G113580.5 , HORVU5Hr1G113580.6 , HORVU5Hr1G113580.3 , HORVU5Hr1G113580.2 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU7Hr1G092600.3 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU3Hr1G034030.2 , HORVU3Hr1G034030.1 , HORVU3Hr1G034030.5
Wheat TraesCS3D02G338400 , TraesCS4A02G470100 , TraesCS2D02G065000 , TraesCS4B02G272600 , TraesCS4B02G271200 , TraesCS6A02G307900 , TraesCS4A02G339200 , TraesCS5D02G494800 , TraesCS5A02G481200 , TraesCS7D02G019600 , TraesCS3B02G376800 , TraesCS1D02G299700 , TraesCS2B02G078800 , TraesCS2A02G066600 , TraesCS1A02G300200 , TraesCS1A02G300200 , TraesCS4A02G034300 , TraesCS1B02G310300 , TraesCS6B02G336500 , TraesCS5D02G535500 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS6D02G287100 , TraesCS6D02G287100 , TraesCS3A02G344800 , TraesCS4D02G270400 , TraesCS5B02G494400 , TraesCS3A02G165900 , TraesCS3B02G376900 , TraesCS3D02G176000 , TraesCS3D02G338600 , TraesCS3B02G200100 , TraesCS3A02G165600 , TraesCS7A02G022400 , TraesCS3B02G199900
Populus PNT51889


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cDNA sequences
Sobic.009G173700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G187700 receptor kinase, putative, expressed -
2 Sobic.001G014600 - -
3 Sobic.006G221500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed -
4 Sobic.008G142500 Leucine Rich Repeat family protein, expressed -
5 Sobic.001G100300 - -
6 Sobic.006G235801 - -
7 Sobic.003G341900 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.007G149500 expressed protein -
9 Sobic.007G042700 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.001G326500 OsFBX157 - F-box domain containing protein, expressed -
11 Sobic.002G046150 - -
12 Sobic.003G072000 receptor kinase, putative, expressed -
13 Sobic.010G089350 - -
14 Sobic.009G213150 - -
15 Sobic.006G136300 - -
16 Sobic.003G142500 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
17 Sobic.006G165200 amino acid permease family protein, putative, expressed -
18 Sobic.010G100600 expressed protein -
19 Sobic.009G025750 - -
20 Sobic.005G119400 stripe rust resistance protein Yr10, putative, expressed -


Gene co-expression network
sample Sobic009G173700 Sobic009G173700 Sobic005G187700 Sobic005G187700 Sobic009G173700--Sobic005G187700 Sobic001G014600 Sobic001G014600 Sobic009G173700--Sobic001G014600 Sobic006G221500 Sobic006G221500 Sobic009G173700--Sobic006G221500 Sobic008G142500 Sobic008G142500 Sobic009G173700--Sobic008G142500 Sobic001G100300 Sobic001G100300 Sobic009G173700--Sobic001G100300 Sobic006G235801 Sobic006G235801 Sobic009G173700--Sobic006G235801 Sobic003G341900 Sobic003G341900 Sobic009G173700--Sobic003G341900 Sobic007G149500 Sobic007G149500 Sobic009G173700--Sobic007G149500 Sobic007G042700 Sobic007G042700 Sobic009G173700--Sobic007G042700 Sobic003G072000 Sobic003G072000 Sobic005G187700--Sobic003G072000 Sobic005G187700--Sobic009G173700 Sobic003G142500 Sobic003G142500 Sobic005G187700--Sobic003G142500 Sobic009G213150 Sobic009G213150 Sobic005G187700--Sobic009G213150 Sobic005G187700--Sobic003G341900 Sobic005G187700--Sobic007G149500 Sobic002G202350 Sobic002G202350 Sobic005G187700--Sobic002G202350 Sobic001G527550 Sobic001G527550 Sobic005G187700--Sobic001G527550 Sobic005G187700--Sobic001G014600 Sobic001G014600--Sobic009G173700 Sobic001G014600--Sobic008G142500 Sobic001G014600--Sobic006G235801 Sobic009G035000 Sobic009G035000 Sobic001G014600--Sobic009G035000 Sobic001G014600--Sobic005G187700 Sobic005G119400 Sobic005G119400 Sobic001G014600--Sobic005G119400 Sobic001G401750 Sobic001G401750 Sobic001G014600--Sobic001G401750 Sobic009G025750 Sobic009G025750 Sobic001G014600--Sobic009G025750 Sobic001G014600--Sobic007G042700 Sobic006G136300 Sobic006G136300 Sobic006G221500--Sobic006G136300 Sobic006G221500--Sobic009G173700 Sobic006G221500--Sobic006G235801 Sobic002G046150 Sobic002G046150 Sobic006G221500--Sobic002G046150 Sobic001G052700 Sobic001G052700 Sobic006G221500--Sobic001G052700 Sobic004G267400 Sobic004G267400 Sobic006G221500--Sobic004G267400 Sobic010G089350 Sobic010G089350 Sobic006G221500--Sobic010G089350 Sobic003G162600 Sobic003G162600 Sobic006G221500--Sobic003G162600 Sobic006G221500--Sobic008G142500 Sobic008G142500--Sobic001G014600 Sobic008G142500--Sobic009G173700 Sobic001G326500 Sobic001G326500 Sobic008G142500--Sobic001G326500 Sobic008G142500--Sobic009G035000 Sobic006G083050 Sobic006G083050 Sobic008G142500--Sobic006G083050 Sobic005G116800 Sobic005G116800 Sobic008G142500--Sobic005G116800 Sobic002G421100 Sobic002G421100 Sobic008G142500--Sobic002G421100 Sobic003G068100 Sobic003G068100 Sobic008G142500--Sobic003G068100 Sobic008G142500--Sobic006G221500 Sobic001G100300--Sobic009G173700 Sobic010G100600 Sobic010G100600 Sobic001G100300--Sobic010G100600 Sobic009G235400 Sobic009G235400 Sobic001G100300--Sobic009G235400 Sobic010G235100 Sobic010G235100 Sobic001G100300--Sobic010G235100 Sobic001G100300--Sobic007G149500 Sobic001G100300--Sobic006G235801 Sobic006G045601 Sobic006G045601 Sobic001G100300--Sobic006G045601 Sobic005G118800 Sobic005G118800 Sobic001G100300--Sobic005G118800 Sobic006G121950 Sobic006G121950 Sobic001G100300--Sobic006G121950 Sobic006G235801--Sobic010G100600 Sobic006G235801--Sobic001G014600 Sobic006G235801--Sobic007G042700 Sobic003G018150 Sobic003G018150 Sobic006G235801--Sobic003G018150 Sobic006G235801--Sobic009G173700 Sobic006G235801--Sobic006G221500 Sobic006G235801--Sobic001G100300 Sobic001G278900 Sobic001G278900 Sobic006G235801--Sobic001G278900 Sobic006G235801--Sobic010G089350 Sobic003G341900--Sobic005G187700 Sobic003G341900--Sobic009G173700 Sobic003G341900--Sobic007G149500 Sobic003G341900--Sobic003G072000 Sobic004G305733 Sobic004G305733 Sobic003G341900--Sobic004G305733 Sobic003G341900--Sobic001G100300 Sobic001G145550 Sobic001G145550 Sobic003G341900--Sobic001G145550 Sobic003G341900--Sobic009G213150 Sobic002G176700 Sobic002G176700 Sobic003G341900--Sobic002G176700 Sobic007G149500--Sobic002G046150 Sobic007G149500--Sobic001G145550 Sobic007G149500--Sobic005G187700 Sobic002G208700 Sobic002G208700 Sobic007G149500--Sobic002G208700 Sobic007G149500--Sobic001G100300 Sobic001G187900 Sobic001G187900 Sobic007G149500--Sobic001G187900 Sobic009G037500 Sobic009G037500 Sobic007G149500--Sobic009G037500 Sobic007G149500--Sobic003G341900 Sobic007G149500--Sobic009G173700 Sobic001G497400 Sobic001G497400 Sobic007G042700--Sobic001G497400 Sobic002G000350 Sobic002G000350 Sobic007G042700--Sobic002G000350 Sobic007G042700--Sobic001G278900 Sobic003G085533 Sobic003G085533 Sobic007G042700--Sobic003G085533 Sobic004G252300 Sobic004G252300 Sobic007G042700--Sobic004G252300 Sobic004G072300 Sobic004G072300 Sobic007G042700--Sobic004G072300 Sobic001G471050 Sobic001G471050 Sobic007G042700--Sobic001G471050 Sobic004G249950 Sobic004G249950 Sobic007G042700--Sobic004G249950 Sobic006G097600 Sobic006G097600 Sobic007G042700--Sobic006G097600
Octagon: transcription factors


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