Gene annotation
Transcriptome id Sobic.009G252400.1
Synonym Sb09g030310, BCS1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
mitochondrial chaperone BCS1, putative, expressed
UniProt C5YWX5
Pfam PF00004 PF14363
Panther DB PTHR23070 PTHR23070:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G50930 : cytochrome BC1 synthesis
RAP-DB (Rice) LOC_Os01g42030.1 : mitochondrial chaperone BCS1, putative, expressed
MaizeGDB (Corn) Zm00025a028637 , Zm00025a044783 , Zm00025a044781 , Zm00025a036761
Brachypodium PNT76143 , KQK04609 , KQK15975 , KQK08635 , PNT75003
Barley HORVU1Hr1G093700.1 , HORVU1Hr1G093760.10 , HORVU1Hr1G093760.11 , HORVU1Hr1G093760.12 , HORVU1Hr1G093760.13 , HORVU1Hr1G093710.1 , HORVU1Hr1G093760.8 , HORVU1Hr1G093760.9 , HORVU1Hr1G093760.2 , HORVU1Hr1G093760.3 , HORVU1Hr1G093760.1 , HORVU1Hr1G093760.6 , HORVU1Hr1G093760.7 , HORVU1Hr1G093760.5 , HORVU1Hr1G093600.5 , HORVU1Hr1G093600.4 , HORVU1Hr1G093600.1 , HORVU1Hr1G093600.3 , HORVU1Hr1G093600.2
Wheat TraesCS1D02G439400 , TraesCS1A02G430000 , TraesCS1B02G464900 , TraesCS1D02G439500 , TraesCS1B02G465000 , TraesCS1A02G430200 , TraesCS1A02G429800 , TraesCS1D02G439300 , TraesCS1B02G464100 , TraesCS1A02G430100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G052000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
2 Sobic.006G257400 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
3 Sobic.010G154801 - -
4 Sobic.001G454600 expressed protein -
5 Sobic.009G026700 expressed protein -
6 Sobic.004G033650 - -
7 Sobic.003G335000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leucine-rich repeat family protein, putative, expressed -
8 Sobic.003G334400 verticillium wilt disease resistance protein precursor, putative, expressed -
9 Sobic.009G137401 - -
10 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
11 Sobic.004G082600 OsFBX126 - F-box domain containing protein, expressed -
12 Sobic.001G019601 - -
13 Sobic.008G132550 - -
14 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.002G317001 - -
16 Sobic.006G167400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
17 Sobic.004G218400 - -
18 Sobic.001G528900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G298000 - -
20 Sobic.004G258450 - -


Gene co-expression network
sample Sobic009G252400 Sobic009G252400 Sobic007G052000 Sobic007G052000 Sobic009G252400--Sobic007G052000 Sobic006G257400 Sobic006G257400 Sobic009G252400--Sobic006G257400 Sobic010G154801 Sobic010G154801 Sobic009G252400--Sobic010G154801 Sobic001G454600 Sobic001G454600 Sobic009G252400--Sobic001G454600 Sobic009G026700 Sobic009G026700 Sobic009G252400--Sobic009G026700 Sobic004G033650 Sobic004G033650 Sobic009G252400--Sobic004G033650 Sobic003G335000 Sobic003G335000 Sobic009G252400--Sobic003G335000 Sobic003G334400 Sobic003G334400 Sobic009G252400--Sobic003G334400 Sobic009G137401 Sobic009G137401 Sobic009G252400--Sobic009G137401 Sobic010G054150 Sobic010G054150 Sobic007G052000--Sobic010G054150 Sobic001G245100 Sobic001G245100 Sobic007G052000--Sobic001G245100 Sobic007G052000--Sobic003G335000 Sobic009G186300 Sobic009G186300 Sobic007G052000--Sobic009G186300 Sobic008G170800 Sobic008G170800 Sobic007G052000--Sobic008G170800 Sobic002G309300 Sobic002G309300 Sobic007G052000--Sobic002G309300 Sobic006G248450 Sobic006G248450 Sobic007G052000--Sobic006G248450 Sobic008G142200 Sobic008G142200 Sobic007G052000--Sobic008G142200 Sobic001G191500 Sobic001G191500 Sobic007G052000--Sobic001G191500 Sobic001G528900 Sobic001G528900 Sobic006G257400--Sobic001G528900 Sobic006G257400--Sobic009G137401 Sobic001G073550 Sobic001G073550 Sobic006G257400--Sobic001G073550 Sobic007G155950 Sobic007G155950 Sobic006G257400--Sobic007G155950 Sobic002G171901 Sobic002G171901 Sobic006G257400--Sobic002G171901 Sobic006G257400--Sobic003G334400 Sobic004G167600 Sobic004G167600 Sobic006G257400--Sobic004G167600 Sobic001G229850 Sobic001G229850 Sobic006G257400--Sobic001G229850 Sobic003G058300 Sobic003G058300 Sobic006G257400--Sobic003G058300 Sobic001G406200 Sobic001G406200 Sobic010G154801--Sobic001G406200 Sobic009G192400 Sobic009G192400 Sobic010G154801--Sobic009G192400 Sobic010G154801--Sobic009G026700 Sobic001G250750 Sobic001G250750 Sobic010G154801--Sobic001G250750 Sobic010G154801--Sobic003G334400 Sobic002G317001 Sobic002G317001 Sobic010G154801--Sobic002G317001 Sobic008G083100 Sobic008G083100 Sobic010G154801--Sobic008G083100 Sobic010G028333 Sobic010G028333 Sobic010G154801--Sobic010G028333 Sobic007G182300 Sobic007G182300 Sobic010G154801--Sobic007G182300 Sobic001G090700 Sobic001G090700 Sobic001G454600--Sobic001G090700 Sobic001G454600--Sobic008G170800 Sobic002G206900 Sobic002G206900 Sobic001G454600--Sobic002G206900 Sobic003G040300 Sobic003G040300 Sobic001G454600--Sobic003G040300 Sobic003G001650 Sobic003G001650 Sobic001G454600--Sobic003G001650 Sobic004G218400 Sobic004G218400 Sobic001G454600--Sobic004G218400 Sobic001G038700 Sobic001G038700 Sobic001G454600--Sobic001G038700 Sobic006G167400 Sobic006G167400 Sobic001G454600--Sobic006G167400 Sobic003G362800 Sobic003G362800 Sobic001G454600--Sobic003G362800 Sobic009G074800 Sobic009G074800 Sobic009G026700--Sobic009G074800 Sobic006G072701 Sobic006G072701 Sobic009G026700--Sobic006G072701 Sobic009G026700--Sobic004G033650 Sobic009G026700--Sobic008G142200 Sobic009G026700--Sobic008G083100 Sobic010G183350 Sobic010G183350 Sobic009G026700--Sobic010G183350 Sobic008G190600 Sobic008G190600 Sobic009G026700--Sobic008G190600 Sobic001G001800 Sobic001G001800 Sobic009G026700--Sobic001G001800 Sobic009G026700--Sobic001G250750 Sobic004G033650--Sobic001G001800 Sobic004G033650--Sobic009G074800 Sobic004G033650--Sobic008G083100 Sobic004G033650--Sobic008G142200 Sobic004G033650--Sobic009G026700 Sobic004G033650--Sobic001G191500 Sobic007G141900 Sobic007G141900 Sobic004G033650--Sobic007G141900 Sobic004G033650--Sobic008G190600 Sobic004G118000 Sobic004G118000 Sobic004G033650--Sobic004G118000 Sobic003G335000--Sobic003G334400 Sobic006G223101 Sobic006G223101 Sobic003G335000--Sobic006G223101 Sobic003G335100 Sobic003G335100 Sobic003G335000--Sobic003G335100 Sobic008G085800 Sobic008G085800 Sobic003G335000--Sobic008G085800 Sobic003G335000--Sobic002G171901 Sobic003G335000--Sobic001G229850 Sobic006G223601 Sobic006G223601 Sobic003G335000--Sobic006G223601 Sobic007G137100 Sobic007G137100 Sobic003G335000--Sobic007G137100 Sobic007G004400 Sobic007G004400 Sobic003G335000--Sobic007G004400 Sobic003G334400--Sobic002G171901 Sobic003G334400--Sobic009G192400 Sobic003G334400--Sobic003G335000 Sobic003G334400--Sobic008G085800 Sobic003G334400--Sobic007G182300 Sobic010G264150 Sobic010G264150 Sobic003G334400--Sobic010G264150 Sobic004G084600 Sobic004G084600 Sobic003G334400--Sobic004G084600 Sobic003G334400--Sobic006G072701 Sobic010G163666 Sobic010G163666 Sobic003G334400--Sobic010G163666 Sobic009G137401--Sobic001G191500 Sobic001G190900 Sobic001G190900 Sobic009G137401--Sobic001G190900 Sobic003G053750 Sobic003G053750 Sobic009G137401--Sobic003G053750 Sobic004G030850 Sobic004G030850 Sobic009G137401--Sobic004G030850 Sobic003G429600 Sobic003G429600 Sobic009G137401--Sobic003G429600 Sobic008G113200 Sobic008G113200 Sobic009G137401--Sobic008G113200 Sobic009G137401--Sobic001G528900 Sobic009G137401--Sobic008G083100 Sobic009G137401--Sobic006G072701
Octagon: transcription factors


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