Gene annotation
Transcriptome id Sobic.009G254700.1
Synonym Sb09g030500
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5YWZ4
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF802
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24420 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g51240.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044763
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G254700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G218600 expressed protein -
2 Sobic.003G039100 expressed protein -
3 Sobic.010G051600 - -
4 Sobic.005G161500 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
5 Sobic.003G336600 homeobox domain containing protein, expressed -
6 Sobic.009G047033 - -
7 Sobic.001G439850 - -
8 Sobic.010G051900 expressed protein -
9 Sobic.003G091900 - -
10 Sobic.001G181300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@folic acid binding protein, putative, expressed -
11 Sobic.005G196700 transporter family protein, putative, expressed -
12 Sobic.005G138200 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
13 Sobic.002G076450 - -
14 Sobic.005G219900 NB-ARC domain containing protein, expressed -
15 Sobic.005G040950 - -
16 Sobic.004G048201 - -
17 Sobic.006G177600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G273900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G208800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
20 Sobic.002G266400 - -


Gene co-expression network
sample Sobic009G254700 Sobic009G254700 Sobic003G218600 Sobic003G218600 Sobic009G254700--Sobic003G218600 Sobic003G039100 Sobic003G039100 Sobic009G254700--Sobic003G039100 Sobic010G051600 Sobic010G051600 Sobic009G254700--Sobic010G051600 Sobic005G161500 Sobic005G161500 Sobic009G254700--Sobic005G161500 Sobic003G336600 Sobic003G336600 Sobic009G254700--Sobic003G336600 Sobic009G047033 Sobic009G047033 Sobic009G254700--Sobic009G047033 Sobic001G439850 Sobic001G439850 Sobic009G254700--Sobic001G439850 Sobic010G051900 Sobic010G051900 Sobic009G254700--Sobic010G051900 Sobic003G091900 Sobic003G091900 Sobic009G254700--Sobic003G091900 Sobic003G218600--Sobic009G254700 Sobic003G218600--Sobic010G051600 Sobic005G040950 Sobic005G040950 Sobic003G218600--Sobic005G040950 Sobic007G119400 Sobic007G119400 Sobic003G218600--Sobic007G119400 Sobic002G076450 Sobic002G076450 Sobic003G218600--Sobic002G076450 Sobic003G289300 Sobic003G289300 Sobic003G218600--Sobic003G289300 Sobic001G437600 Sobic001G437600 Sobic003G218600--Sobic001G437600 Sobic005G106900 Sobic005G106900 Sobic003G218600--Sobic005G106900 Sobic003G218600--Sobic010G051900 Sobic001G015600 Sobic001G015600 Sobic003G039100--Sobic001G015600 Sobic007G165000 Sobic007G165000 Sobic003G039100--Sobic007G165000 Sobic003G039100--Sobic003G336600 Sobic001G270200 Sobic001G270200 Sobic003G039100--Sobic001G270200 Sobic001G044100 Sobic001G044100 Sobic003G039100--Sobic001G044100 Sobic001G039000 Sobic001G039000 Sobic003G039100--Sobic001G039000 Sobic003G039100--Sobic010G051600 Sobic009G240300 Sobic009G240300 Sobic003G039100--Sobic009G240300 Sobic003G039100--Sobic009G254700 Sobic010G051600--Sobic009G047033 Sobic010G051600--Sobic001G437600 Sobic010G051600--Sobic010G051900 Sobic002G076200 Sobic002G076200 Sobic010G051600--Sobic002G076200 Sobic010G051600--Sobic005G040950 Sobic010G051600--Sobic005G106900 Sobic007G185000 Sobic007G185000 Sobic010G051600--Sobic007G185000 Sobic010G010100 Sobic010G010100 Sobic010G051600--Sobic010G010100 Sobic005G059300 Sobic005G059300 Sobic010G051600--Sobic005G059300 Sobic005G161500--Sobic001G270200 Sobic004G072400 Sobic004G072400 Sobic005G161500--Sobic004G072400 Sobic003G125000 Sobic003G125000 Sobic005G161500--Sobic003G125000 Sobic005G161500--Sobic001G044100 Sobic001G364200 Sobic001G364200 Sobic005G161500--Sobic001G364200 Sobic009G133100 Sobic009G133100 Sobic005G161500--Sobic009G133100 Sobic010G078000 Sobic010G078000 Sobic005G161500--Sobic010G078000 Sobic001G058000 Sobic001G058000 Sobic005G161500--Sobic001G058000 Sobic005G161500--Sobic007G165000 Sobic003G336600--Sobic003G091900 Sobic010G213100 Sobic010G213100 Sobic003G336600--Sobic010G213100 Sobic008G159800 Sobic008G159800 Sobic003G336600--Sobic008G159800 Sobic003G308900 Sobic003G308900 Sobic003G336600--Sobic003G308900 Sobic005G090700 Sobic005G090700 Sobic003G336600--Sobic005G090700 Sobic003G336600--Sobic007G185000 Sobic003G243750 Sobic003G243750 Sobic003G336600--Sobic003G243750 Sobic002G377400 Sobic002G377400 Sobic003G336600--Sobic002G377400 Sobic007G165100 Sobic007G165100 Sobic003G336600--Sobic007G165100 Sobic009G047033--Sobic010G051600 Sobic009G047033--Sobic010G051900 Sobic009G047033--Sobic003G091900 Sobic009G047033--Sobic007G185000 Sobic009G047033--Sobic002G076450 Sobic004G343733 Sobic004G343733 Sobic009G047033--Sobic004G343733 Sobic009G047033--Sobic003G308900 Sobic009G047033--Sobic010G213100 Sobic003G092150 Sobic003G092150 Sobic009G047033--Sobic003G092150 Sobic005G065400 Sobic005G065400 Sobic001G439850--Sobic005G065400 Sobic001G453150 Sobic001G453150 Sobic001G439850--Sobic001G453150 Sobic002G088500 Sobic002G088500 Sobic001G439850--Sobic002G088500 Sobic002G227400 Sobic002G227400 Sobic001G439850--Sobic002G227400 Sobic002G285101 Sobic002G285101 Sobic001G439850--Sobic002G285101 Sobic008G091500 Sobic008G091500 Sobic001G439850--Sobic008G091500 Sobic007G129500 Sobic007G129500 Sobic001G439850--Sobic007G129500 Sobic007G171300 Sobic007G171300 Sobic001G439850--Sobic007G171300 Sobic010G135700 Sobic010G135700 Sobic001G439850--Sobic010G135700 Sobic010G051900--Sobic005G040950 Sobic008G119100 Sobic008G119100 Sobic010G051900--Sobic008G119100 Sobic010G051900--Sobic002G076450 Sobic010G051900--Sobic009G047033 Sobic010G051900--Sobic010G051600 Sobic010G051900--Sobic003G289300 Sobic001G241500 Sobic001G241500 Sobic010G051900--Sobic001G241500 Sobic003G157800 Sobic003G157800 Sobic010G051900--Sobic003G157800 Sobic001G524900 Sobic001G524900 Sobic010G051900--Sobic001G524900 Sobic003G091900--Sobic010G213100 Sobic007G182400 Sobic007G182400 Sobic003G091900--Sobic007G182400 Sobic003G091900--Sobic009G047033 Sobic001G062000 Sobic001G062000 Sobic003G091900--Sobic001G062000 Sobic003G056900 Sobic003G056900 Sobic003G091900--Sobic003G056900 Sobic010G054400 Sobic010G054400 Sobic003G091900--Sobic010G054400 Sobic003G091900--Sobic002G377400 Sobic003G091900--Sobic003G336600 Sobic003G091900--Sobic007G185000
Octagon: transcription factors


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