Gene annotation
Transcriptome id Sobic.005G138200.2,Sobic.005G138200.1
Synonym ATNUDX13, Sb05g020270, NUDX13, ATNUDT13
Functional annotation hydrolase, NUDIX family, domain containing protein, expressed
UniProt A0A1B6PSB6 , A0A1B6PSD4
Pfam PF00293
Panther DB PTHR12629 PTHR12629:SF12
NCBI CDD KOG2839; Diadenosine and diphosphoinositol polyphosphate phosphohydrolase
KEGG Orthology K07766; diphosphoinositol-polyphosphate diphosphatase
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G26690 : nudix hydrolase homolog 13
RAP-DB (Rice) LOC_Os11g32750.1,LOC_Os11g32750.2 : hydrolase, NUDIX family, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033576
Brachypodium KQJ88349 , PNT63544 , PNT63545 , PNT63542 , PNT63543 , KQJ88352 , KQJ88350 , KQJ88351
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G138200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G336600 homeobox domain containing protein, expressed -
2 Sobic.003G308900 expressed protein -
3 Sobic.009G047033 - -
4 Sobic.010G051600 - -
5 Sobic.005G090700 - -
6 Sobic.008G159800 - -
7 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
8 Sobic.008G134500 protein kinase domain containing protein, expressed -
9 Sobic.008G065700 RNA recognition motif containing protein, expressed -
10 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
11 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
12 Sobic.005G219900 NB-ARC domain containing protein, expressed -
13 Sobic.003G243750 - -
14 Sobic.002G296800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cell cycle control protein, putative, expressed -
15 Sobic.003G336700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
17 Sobic.003G091900 - -
18 Sobic.007G182400 - -
19 Sobic.009G203600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Receptor-like protein kinase HSL1(PubMedID : 31721651)@receptor-like protein kinase 5 precursor, putative, expressed -
20 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -


Gene co-expression network
sample Sobic005G138200 Sobic005G138200 Sobic003G336600 Sobic003G336600 Sobic005G138200--Sobic003G336600 Sobic003G308900 Sobic003G308900 Sobic005G138200--Sobic003G308900 Sobic009G047033 Sobic009G047033 Sobic005G138200--Sobic009G047033 Sobic010G051600 Sobic010G051600 Sobic005G138200--Sobic010G051600 Sobic005G090700 Sobic005G090700 Sobic005G138200--Sobic005G090700 Sobic008G159800 Sobic008G159800 Sobic005G138200--Sobic008G159800 Sobic007G185000 Sobic007G185000 Sobic005G138200--Sobic007G185000 Sobic008G134500 Sobic008G134500 Sobic005G138200--Sobic008G134500 Sobic008G065700 Sobic008G065700 Sobic005G138200--Sobic008G065700 Sobic003G091900 Sobic003G091900 Sobic003G336600--Sobic003G091900 Sobic010G213100 Sobic010G213100 Sobic003G336600--Sobic010G213100 Sobic003G336600--Sobic008G159800 Sobic003G336600--Sobic003G308900 Sobic003G336600--Sobic005G090700 Sobic003G336600--Sobic007G185000 Sobic003G243750 Sobic003G243750 Sobic003G336600--Sobic003G243750 Sobic002G377400 Sobic002G377400 Sobic003G336600--Sobic002G377400 Sobic007G165100 Sobic007G165100 Sobic003G336600--Sobic007G165100 Sobic003G308900--Sobic002G377400 Sobic003G308900--Sobic007G185000 Sobic010G249600 Sobic010G249600 Sobic003G308900--Sobic010G249600 Sobic003G440500 Sobic003G440500 Sobic003G308900--Sobic003G440500 Sobic002G296800 Sobic002G296800 Sobic003G308900--Sobic002G296800 Sobic003G308900--Sobic005G090700 Sobic003G308900--Sobic003G243750 Sobic003G308900--Sobic008G065700 Sobic003G308900--Sobic008G159800 Sobic009G047033--Sobic010G051600 Sobic010G051900 Sobic010G051900 Sobic009G047033--Sobic010G051900 Sobic009G047033--Sobic003G091900 Sobic009G047033--Sobic007G185000 Sobic002G076450 Sobic002G076450 Sobic009G047033--Sobic002G076450 Sobic004G343733 Sobic004G343733 Sobic009G047033--Sobic004G343733 Sobic009G047033--Sobic003G308900 Sobic009G047033--Sobic010G213100 Sobic003G092150 Sobic003G092150 Sobic009G047033--Sobic003G092150 Sobic010G051600--Sobic009G047033 Sobic001G437600 Sobic001G437600 Sobic010G051600--Sobic001G437600 Sobic010G051600--Sobic010G051900 Sobic002G076200 Sobic002G076200 Sobic010G051600--Sobic002G076200 Sobic005G040950 Sobic005G040950 Sobic010G051600--Sobic005G040950 Sobic005G106900 Sobic005G106900 Sobic010G051600--Sobic005G106900 Sobic010G051600--Sobic007G185000 Sobic010G010100 Sobic010G010100 Sobic010G051600--Sobic010G010100 Sobic005G059300 Sobic005G059300 Sobic010G051600--Sobic005G059300 Sobic005G090700--Sobic003G308900 Sobic005G090700--Sobic008G159800 Sobic005G090700--Sobic010G249600 Sobic005G090700--Sobic002G377400 Sobic005G090700--Sobic003G336600 Sobic009G112500 Sobic009G112500 Sobic005G090700--Sobic009G112500 Sobic005G090700--Sobic002G296800 Sobic005G014400 Sobic005G014400 Sobic005G090700--Sobic005G014400 Sobic006G268100 Sobic006G268100 Sobic005G090700--Sobic006G268100 Sobic010G242000 Sobic010G242000 Sobic008G159800--Sobic010G242000 Sobic005G025400 Sobic005G025400 Sobic008G159800--Sobic005G025400 Sobic008G159800--Sobic003G440500 Sobic008G159800--Sobic005G090700 Sobic008G159800--Sobic007G185000 Sobic008G159800--Sobic005G014400 Sobic008G159800--Sobic003G308900 Sobic008G159800--Sobic002G377400 Sobic008G159800--Sobic003G336600 Sobic007G185000--Sobic002G377400 Sobic007G185000--Sobic003G308900 Sobic007G185000--Sobic003G243750 Sobic007G185000--Sobic003G440500 Sobic009G203600 Sobic009G203600 Sobic007G185000--Sobic009G203600 Sobic007G185000--Sobic007G165100 Sobic007G226000 Sobic007G226000 Sobic007G185000--Sobic007G226000 Sobic007G185000--Sobic009G047033 Sobic007G185000--Sobic010G249600 Sobic007G114650 Sobic007G114650 Sobic008G134500--Sobic007G114650 Sobic008G134500--Sobic010G242000 Sobic008G134500--Sobic007G185000 Sobic008G134500--Sobic008G159800 Sobic008G134500--Sobic005G025400 Sobic009G187900 Sobic009G187900 Sobic008G134500--Sobic009G187900 Sobic008G134500--Sobic003G440500 Sobic006G170800 Sobic006G170800 Sobic008G134500--Sobic006G170800 Sobic008G134500--Sobic007G165100 Sobic003G149400 Sobic003G149400 Sobic008G065700--Sobic003G149400 Sobic004G224000 Sobic004G224000 Sobic008G065700--Sobic004G224000 Sobic005G110553 Sobic005G110553 Sobic008G065700--Sobic005G110553 Sobic001G367900 Sobic001G367900 Sobic008G065700--Sobic001G367900 Sobic008G065700--Sobic003G092150 Sobic008G065700--Sobic007G226000 Sobic009G122000 Sobic009G122000 Sobic008G065700--Sobic009G122000 Sobic007G210200 Sobic007G210200 Sobic008G065700--Sobic007G210200 Sobic008G065700--Sobic002G377400
Octagon: transcription factors


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