Gene annotation
Transcriptome id Sobic.010G089300.1
Synonym
Functional annotation expressed protein
UniProt C5Z6Z0
Pfam -
Panther DB PTHR33065 PTHR33065:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g54759.1 : expressed protein
MaizeGDB (Corn) Zm00025a037254 , Zm00025a037255 , Zm00025a037280
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G042200 Rf1, mitochondrial precursor, putative, expressed -
2 Sobic.006G111500 expressed protein -
3 Sobic.004G123600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed K18213: proteinaceous RNase P
4 Sobic.004G059100 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor, putative, expressed -
5 Sobic.005G017100 pentatricopeptide, putative, expressed -
6 Sobic.009G157000 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
7 Sobic.006G178800 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.002G396200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
9 Sobic.006G163650 - -
10 Sobic.005G076650 - -
11 Sobic.010G207700 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
12 Sobic.005G003900 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase
13 Sobic.002G340350 - -
14 Sobic.001G312700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@selenium-binding protein-like, putative, expressed -
15 Sobic.001G267500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
16 Sobic.004G233500 trpH, putative, expressed K07053: 3',5'-nucleoside bisphosphate phosphatase
17 Sobic.003G100200 TOO MANY MOUTHS precursor, putative, expressed -
18 Sobic.004G044100 expressed protein -
19 Sobic.005G021200 expressed protein -
20 Sobic.002G285450 - -


Gene co-expression network
sample Sobic010G089300 Sobic010G089300 Sobic010G042200 Sobic010G042200 Sobic010G089300--Sobic010G042200 Sobic006G111500 Sobic006G111500 Sobic010G089300--Sobic006G111500 Sobic004G123600 Sobic004G123600 Sobic010G089300--Sobic004G123600 Sobic004G059100 Sobic004G059100 Sobic010G089300--Sobic004G059100 Sobic005G017100 Sobic005G017100 Sobic010G089300--Sobic005G017100 Sobic009G157000 Sobic009G157000 Sobic010G089300--Sobic009G157000 Sobic006G178800 Sobic006G178800 Sobic010G089300--Sobic006G178800 Sobic002G396200 Sobic002G396200 Sobic010G089300--Sobic002G396200 Sobic006G163650 Sobic006G163650 Sobic010G089300--Sobic006G163650 Sobic010G042200--Sobic004G059100 Sobic010G042200--Sobic005G017100 Sobic010G042200--Sobic010G089300 Sobic001G267500 Sobic001G267500 Sobic010G042200--Sobic001G267500 Sobic002G106100 Sobic002G106100 Sobic010G042200--Sobic002G106100 Sobic004G076850 Sobic004G076850 Sobic010G042200--Sobic004G076850 Sobic005G003900 Sobic005G003900 Sobic010G042200--Sobic005G003900 Sobic001G448100 Sobic001G448100 Sobic010G042200--Sobic001G448100 Sobic002G050500 Sobic002G050500 Sobic010G042200--Sobic002G050500 Sobic006G111500--Sobic009G157000 Sobic001G516200 Sobic001G516200 Sobic006G111500--Sobic001G516200 Sobic006G111500--Sobic004G123600 Sobic007G139000 Sobic007G139000 Sobic006G111500--Sobic007G139000 Sobic010G267650 Sobic010G267650 Sobic006G111500--Sobic010G267650 Sobic002G285450 Sobic002G285450 Sobic006G111500--Sobic002G285450 Sobic004G310700 Sobic004G310700 Sobic006G111500--Sobic004G310700 Sobic003G191800 Sobic003G191800 Sobic006G111500--Sobic003G191800 Sobic004G132400 Sobic004G132400 Sobic006G111500--Sobic004G132400 Sobic001G381900 Sobic001G381900 Sobic004G123600--Sobic001G381900 Sobic004G123600--Sobic009G157000 Sobic004G123600--Sobic006G111500 Sobic006G248700 Sobic006G248700 Sobic004G123600--Sobic006G248700 Sobic003G211500 Sobic003G211500 Sobic004G123600--Sobic003G211500 Sobic003G132300 Sobic003G132300 Sobic004G123600--Sobic003G132300 Sobic004G123300 Sobic004G123300 Sobic004G123600--Sobic004G123300 Sobic006G122900 Sobic006G122900 Sobic004G123600--Sobic006G122900 Sobic004G123600--Sobic004G132400 Sobic009G163700 Sobic009G163700 Sobic004G059100--Sobic009G163700 Sobic004G059100--Sobic010G042200 Sobic001G247000 Sobic001G247000 Sobic004G059100--Sobic001G247000 Sobic005G131900 Sobic005G131900 Sobic004G059100--Sobic005G131900 Sobic006G278800 Sobic006G278800 Sobic004G059100--Sobic006G278800 Sobic002G035500 Sobic002G035500 Sobic004G059100--Sobic002G035500 Sobic006G108000 Sobic006G108000 Sobic004G059100--Sobic006G108000 Sobic002G394200 Sobic002G394200 Sobic004G059100--Sobic002G394200 Sobic004G059100--Sobic005G017100 Sobic005G017100--Sobic001G267500 Sobic003G377200 Sobic003G377200 Sobic005G017100--Sobic003G377200 Sobic005G017100--Sobic006G163650 Sobic005G017100--Sobic001G247000 Sobic005G017100--Sobic010G042200 Sobic005G017100--Sobic004G059100 Sobic003G100200 Sobic003G100200 Sobic005G017100--Sobic003G100200 Sobic002G340350 Sobic002G340350 Sobic005G017100--Sobic002G340350 Sobic001G312700 Sobic001G312700 Sobic005G017100--Sobic001G312700 Sobic009G157000--Sobic006G111500 Sobic009G157000--Sobic002G285450 Sobic009G157000--Sobic004G123600 Sobic009G157000--Sobic007G139000 Sobic002G283800 Sobic002G283800 Sobic009G157000--Sobic002G283800 Sobic009G157000--Sobic003G191800 Sobic009G157000--Sobic004G310700 Sobic002G406400 Sobic002G406400 Sobic009G157000--Sobic002G406400 Sobic009G157000--Sobic004G132400 Sobic009G134000 Sobic009G134000 Sobic006G178800--Sobic009G134000 Sobic010G143300 Sobic010G143300 Sobic006G178800--Sobic010G143300 Sobic003G333000 Sobic003G333000 Sobic006G178800--Sobic003G333000 Sobic007G113900 Sobic007G113900 Sobic006G178800--Sobic007G113900 Sobic006G178800--Sobic002G396200 Sobic002G142500 Sobic002G142500 Sobic006G178800--Sobic002G142500 Sobic010G207700 Sobic010G207700 Sobic006G178800--Sobic010G207700 Sobic004G044100 Sobic004G044100 Sobic006G178800--Sobic004G044100 Sobic005G227050 Sobic005G227050 Sobic006G178800--Sobic005G227050 Sobic002G396200--Sobic006G178800 Sobic006G157800 Sobic006G157800 Sobic002G396200--Sobic006G157800 Sobic002G396200--Sobic010G207700 Sobic009G055900 Sobic009G055900 Sobic002G396200--Sobic009G055900 Sobic004G243400 Sobic004G243400 Sobic002G396200--Sobic004G243400 Sobic009G010900 Sobic009G010900 Sobic002G396200--Sobic009G010900 Sobic003G223100 Sobic003G223100 Sobic002G396200--Sobic003G223100 Sobic002G396200--Sobic009G157000 Sobic002G396200--Sobic003G333000 Sobic006G163650--Sobic007G139000 Sobic010G014900 Sobic010G014900 Sobic006G163650--Sobic010G014900 Sobic004G107400 Sobic004G107400 Sobic006G163650--Sobic004G107400 Sobic010G152700 Sobic010G152700 Sobic006G163650--Sobic010G152700 Sobic006G163650--Sobic003G191800 Sobic003G359200 Sobic003G359200 Sobic006G163650--Sobic003G359200 Sobic007G153300 Sobic007G153300 Sobic006G163650--Sobic007G153300 Sobic005G102200 Sobic005G102200 Sobic006G163650--Sobic005G102200 Sobic007G158400 Sobic007G158400 Sobic006G163650--Sobic007G158400
Octagon: transcription factors


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