Gene annotation
Transcriptome id Sobic.010G100100.2,Sobic.010G100100.1
Synonym JMT
Functional annotation SAM dependent carboxyl methyltransferase, putative, expressed
UniProt A0A1W0VS89 , A0A194YJB3
Pfam PF03492
Panther DB PTHR31009 PTHR31009:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G04370 : jasmonic acid carboxyl methyltransferase,S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g13560.1,LOC_Os11g15030.1 : SAM dependent carboxyl methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G099451 - -
2 Sobic.005G110406 - K16223: protein FLOWERING LOCUS T
3 Sobic.004G083401 - -
4 Sobic.003G399700 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.006G104700 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
6 Sobic.006G172500 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
7 Sobic.001G231900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
8 Sobic.007G094300 tetraspanin family protein, putative, expressed -
9 Sobic.010G088800 cytokinin-O-glucosyltransferase 2, putative, expressed -
10 Sobic.010G135100 expressed protein -
11 Sobic.010G179400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
12 Sobic.007G090460 - K08235: xyloglucan:xyloglucosyl transferase
13 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
14 Sobic.002G219400 oxidoreductase/ transition metal ion binding protein, putative, expressed -
15 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
16 Sobic.007G148900 cytochrome P450, putative, expressed -
17 Sobic.009G052800 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.005G161700 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
19 Sobic.006G277800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.002G261300 expressed protein -


Gene co-expression network
sample Sobic010G100100 Sobic010G100100 Sobic002G099451 Sobic002G099451 Sobic010G100100--Sobic002G099451 Sobic005G110406 Sobic005G110406 Sobic010G100100--Sobic005G110406 Sobic004G083401 Sobic004G083401 Sobic010G100100--Sobic004G083401 Sobic003G399700 Sobic003G399700 Sobic010G100100--Sobic003G399700 Sobic006G104700 Sobic006G104700 Sobic010G100100--Sobic006G104700 Sobic006G172500 Sobic006G172500 Sobic010G100100--Sobic006G172500 Sobic001G231900 Sobic001G231900 Sobic010G100100--Sobic001G231900 Sobic007G094300 Sobic007G094300 Sobic010G100100--Sobic007G094300 Sobic010G088800 Sobic010G088800 Sobic010G100100--Sobic010G088800 Sobic002G099451--Sobic007G094300 Sobic004G121700 Sobic004G121700 Sobic002G099451--Sobic004G121700 Sobic002G099451--Sobic004G083401 Sobic006G072201 Sobic006G072201 Sobic002G099451--Sobic006G072201 Sobic002G099451--Sobic005G110406 Sobic007G047500 Sobic007G047500 Sobic002G099451--Sobic007G047500 Sobic010G179400 Sobic010G179400 Sobic002G099451--Sobic010G179400 Sobic008G148200 Sobic008G148200 Sobic002G099451--Sobic008G148200 Sobic002G261300 Sobic002G261300 Sobic002G099451--Sobic002G261300 Sobic010G135100 Sobic010G135100 Sobic005G110406--Sobic010G135100 Sobic006G277800 Sobic006G277800 Sobic005G110406--Sobic006G277800 Sobic007G090460 Sobic007G090460 Sobic005G110406--Sobic007G090460 Sobic005G110406--Sobic007G094300 Sobic004G229400 Sobic004G229400 Sobic005G110406--Sobic004G229400 Sobic006G277500 Sobic006G277500 Sobic005G110406--Sobic006G277500 Sobic009G052800 Sobic009G052800 Sobic005G110406--Sobic009G052800 Sobic002G234400 Sobic002G234400 Sobic005G110406--Sobic002G234400 Sobic005G110406--Sobic010G088800 Sobic007G148900 Sobic007G148900 Sobic004G083401--Sobic007G148900 Sobic004G083401--Sobic007G094300 Sobic004G083401--Sobic002G099451 Sobic004G083401--Sobic010G088800 Sobic004G083401--Sobic005G110406 Sobic004G083401--Sobic009G052800 Sobic005G166800 Sobic005G166800 Sobic004G083401--Sobic005G166800 Sobic004G083401--Sobic007G090460 Sobic004G083401--Sobic001G231900 Sobic003G399700--Sobic002G234400 Sobic003G399700--Sobic001G231900 Sobic006G172550 Sobic006G172550 Sobic003G399700--Sobic006G172550 Sobic006G198700 Sobic006G198700 Sobic003G399700--Sobic006G198700 Sobic004G292900 Sobic004G292900 Sobic003G399700--Sobic004G292900 Sobic003G399700--Sobic006G172500 Sobic001G302600 Sobic001G302600 Sobic003G399700--Sobic001G302600 Sobic002G250000 Sobic002G250000 Sobic003G399700--Sobic002G250000 Sobic002G219400 Sobic002G219400 Sobic003G399700--Sobic002G219400 Sobic002G238600 Sobic002G238600 Sobic006G104700--Sobic002G238600 Sobic003G112400 Sobic003G112400 Sobic006G104700--Sobic003G112400 Sobic002G390000 Sobic002G390000 Sobic006G104700--Sobic002G390000 Sobic003G060100 Sobic003G060100 Sobic006G104700--Sobic003G060100 Sobic006G104700--Sobic006G277800 Sobic006G104700--Sobic006G072201 Sobic001G065900 Sobic001G065900 Sobic006G104700--Sobic001G065900 Sobic006G104700--Sobic005G110406 Sobic006G104700--Sobic010G135100 Sobic006G172500--Sobic006G172550 Sobic003G399600 Sobic003G399600 Sobic006G172500--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic006G172500--Sobic002G085900 Sobic006G225500 Sobic006G225500 Sobic006G172500--Sobic006G225500 Sobic006G172500--Sobic010G088800 Sobic001G304201 Sobic001G304201 Sobic006G172500--Sobic001G304201 Sobic002G326500 Sobic002G326500 Sobic006G172500--Sobic002G326500 Sobic006G172500--Sobic002G250000 Sobic006G172500--Sobic007G090460 Sobic001G231900--Sobic003G399700 Sobic001G231900--Sobic001G304201 Sobic001G231900--Sobic001G302600 Sobic009G106400 Sobic009G106400 Sobic001G231900--Sobic009G106400 Sobic004G349125 Sobic004G349125 Sobic001G231900--Sobic004G349125 Sobic007G021700 Sobic007G021700 Sobic001G231900--Sobic007G021700 Sobic001G231900--Sobic002G219400 Sobic001G231900--Sobic006G198700 Sobic003G228600 Sobic003G228600 Sobic001G231900--Sobic003G228600 Sobic007G094300--Sobic004G121700 Sobic007G094300--Sobic008G148200 Sobic007G094300--Sobic006G277800 Sobic007G094300--Sobic005G110406 Sobic007G094300--Sobic006G072201 Sobic007G094300--Sobic010G088800 Sobic007G094300--Sobic002G099451 Sobic007G094300--Sobic006G277500 Sobic007G094300--Sobic009G052800 Sobic010G088800--Sobic007G090460 Sobic003G140600 Sobic003G140600 Sobic010G088800--Sobic003G140600 Sobic006G103300 Sobic006G103300 Sobic010G088800--Sobic006G103300 Sobic010G088800--Sobic006G172500 Sobic010G088800--Sobic006G172550 Sobic010G088800--Sobic006G225500 Sobic005G166700 Sobic005G166700 Sobic010G088800--Sobic005G166700 Sobic010G088800--Sobic002G085900 Sobic007G008600 Sobic007G008600 Sobic010G088800--Sobic007G008600
Octagon: transcription factors


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