Gene annotation
Transcriptome id Sobic.K028000.2,Sobic.K028000.1,Sobic.K028000.3
Synonym
Functional annotation -
UniProt A0A109ND12 , A0A109ND15
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G068400 receptor kinase, putative, expressed -
2 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
3 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
4 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
5 Sobic.K044414 - -
6 Sobic.007G044500 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed -
7 Sobic.005G083733 - -
8 Sobic.002G163600 - -
9 Sobic.007G043100 cycloartenol synthase, putative, expressed -
10 Sobic.002G071350 - -
11 Sobic.002G071350 - -
12 Sobic.002G071350 - -
13 Sobic.002G071350 - -
14 Sobic.003G106200 expressed protein K13144: integrator complex subunit 7
15 Sobic.002G213800 auxin-repressed protein, putative, expressed -
16 Sobic.007G164050 - -
17 Sobic.003G400266 - -
18 Sobic.001G537700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
19 Sobic.001G090500 YT521-B-like family domain containing protein, expressed -
20 Sobic.004G185400 - -


Gene co-expression network
sample SobicK028000 SobicK028000 Sobic003G068400 Sobic003G068400 SobicK028000--Sobic003G068400 Sobic007G144400 Sobic007G144400 SobicK028000--Sobic007G144400 SobicK044414 SobicK044414 SobicK028000--SobicK044414 Sobic007G044500 Sobic007G044500 SobicK028000--Sobic007G044500 Sobic005G083733 Sobic005G083733 SobicK028000--Sobic005G083733 Sobic002G163600 Sobic002G163600 SobicK028000--Sobic002G163600 Sobic007G043100 Sobic007G043100 SobicK028000--Sobic007G043100 Sobic001G246200 Sobic001G246200 Sobic003G068400--Sobic001G246200 Sobic008G189900 Sobic008G189900 Sobic003G068400--Sobic008G189900 Sobic007G131200 Sobic007G131200 Sobic003G068400--Sobic007G131200 Sobic003G222600 Sobic003G222600 Sobic003G068400--Sobic003G222600 Sobic003G068500 Sobic003G068500 Sobic003G068400--Sobic003G068500 Sobic002G146400 Sobic002G146400 Sobic003G068400--Sobic002G146400 Sobic001G537700 Sobic001G537700 Sobic003G068400--Sobic001G537700 Sobic005G059200 Sobic005G059200 Sobic003G068400--Sobic005G059200 Sobic004G070200 Sobic004G070200 Sobic003G068400--Sobic004G070200 Sobic007G144400--Sobic007G144400 Sobic007G144400--Sobic007G044500 Sobic007G144400--Sobic005G083733 Sobic003G400266 Sobic003G400266 Sobic007G144400--Sobic003G400266 Sobic003G148700 Sobic003G148700 Sobic007G144400--Sobic003G148700 Sobic002G051300 Sobic002G051300 Sobic007G144400--Sobic002G051300 Sobic001G277000 Sobic001G277000 Sobic007G144400--Sobic001G277000 Sobic001G015300 Sobic001G015300 Sobic007G144400--Sobic001G015300 Sobic003G160466 Sobic003G160466 SobicK044414--Sobic003G160466 Sobic005G095660 Sobic005G095660 SobicK044414--Sobic005G095660 Sobic001G248200 Sobic001G248200 SobicK044414--Sobic001G248200 Sobic003G418733 Sobic003G418733 SobicK044414--Sobic003G418733 Sobic002G022100 Sobic002G022100 SobicK044414--Sobic002G022100 Sobic001G359500 Sobic001G359500 SobicK044414--Sobic001G359500 Sobic002G103100 Sobic002G103100 SobicK044414--Sobic002G103100 Sobic002G122200 Sobic002G122200 SobicK044414--Sobic002G122200 SobicK044414--Sobic002G163600 Sobic007G044500--Sobic007G144400 Sobic007G044500--Sobic005G083733 Sobic007G044500--Sobic003G400266 Sobic001G517400 Sobic001G517400 Sobic007G044500--Sobic001G517400 Sobic007G044500--Sobic002G051300 Sobic007G044500--Sobic003G148700 Sobic007G044500--Sobic001G277000 Sobic005G083733--Sobic003G400266 Sobic005G083733--Sobic007G144400 Sobic005G083733--Sobic007G044500 Sobic002G213800 Sobic002G213800 Sobic005G083733--Sobic002G213800 Sobic005G083733--Sobic001G277000 Sobic008G124100 Sobic008G124100 Sobic005G083733--Sobic008G124100 Sobic005G083733--Sobic003G148700 Sobic007G164050 Sobic007G164050 Sobic002G163600--Sobic007G164050 Sobic004G096600 Sobic004G096600 Sobic002G163600--Sobic004G096600 Sobic007G065100 Sobic007G065100 Sobic002G163600--Sobic007G065100 Sobic002G181300 Sobic002G181300 Sobic002G163600--Sobic002G181300 Sobic006G276100 Sobic006G276100 Sobic002G163600--Sobic006G276100 Sobic010G000600 Sobic010G000600 Sobic002G163600--Sobic010G000600 Sobic004G181700 Sobic004G181700 Sobic002G163600--Sobic004G181700 Sobic003G190000 Sobic003G190000 Sobic002G163600--Sobic003G190000 Sobic005G075100 Sobic005G075100 Sobic002G163600--Sobic005G075100 Sobic002G071350 Sobic002G071350 Sobic007G043100--Sobic002G071350 Sobic010G126200 Sobic010G126200 Sobic007G043100--Sobic010G126200 Sobic002G428501 Sobic002G428501 Sobic007G043100--Sobic002G428501 Sobic002G190200 Sobic002G190200 Sobic007G043100--Sobic002G190200 Sobic001G283900 Sobic001G283900 Sobic007G043100--Sobic001G283900 Sobic002G044700 Sobic002G044700 Sobic007G043100--Sobic002G044700
Octagon: transcription factors


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