Gene annotation
Transcriptome id Sobic.001G022200.1
Synonym
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5WTX8
Pfam PF03168
Panther DB PTHR31415 PTHR31415:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35460 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os03g62020.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016370
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G248300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
2 Sobic.003G409500 - -
3 Sobic.001G073400 expressed protein -
4 Sobic.002G325200 harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.005G139600 Cupin domain containing protein, expressed -
6 Sobic.005G100500 RNA polymerase subunit, putative, expressed K03020: RPC19, DNA-directed RNA polymerases I and III subunit RPAC2
7 Sobic.001G395600 proteins of unknown function domain containing protein, expressed -
8 Sobic.003G298300 expressed protein -
9 Sobic.001G201933 - -
10 Sobic.002G357200 - -
11 Sobic.002G191900 OsFBX325 - F-box domain containing protein, expressed -
12 Sobic.009G255000 tyrosine protein kinase domain containing protein, putative, expressed -
13 Sobic.003G290200 expressed protein -
14 Sobic.003G139600 expressed protein -
15 Sobic.010G002301 - -
16 Sobic.006G076900 anthocyanin regulatory Lc protein, putative, expressed -
17 Sobic.001G465600 AMP-binding domain containing protein, expressed -
18 Sobic.002G311700 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.006G206600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine phosphatase, putative, expressed -
20 Sobic.006G280400 Up-reguralion under drought(PubMedID : 24916767)@phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase


Gene co-expression network
sample Sobic001G022200 Sobic001G022200 Sobic004G248300 Sobic004G248300 Sobic001G022200--Sobic004G248300 Sobic003G409500 Sobic003G409500 Sobic001G022200--Sobic003G409500 Sobic001G073400 Sobic001G073400 Sobic001G022200--Sobic001G073400 Sobic002G325200 Sobic002G325200 Sobic001G022200--Sobic002G325200 Sobic005G139600 Sobic005G139600 Sobic001G022200--Sobic005G139600 Sobic005G100500 Sobic005G100500 Sobic001G022200--Sobic005G100500 Sobic001G395600 Sobic001G395600 Sobic001G022200--Sobic001G395600 Sobic003G298300 Sobic003G298300 Sobic001G022200--Sobic003G298300 Sobic001G201933 Sobic001G201933 Sobic001G022200--Sobic001G201933 Sobic004G248300--Sobic001G022200 Sobic004G248300--Sobic003G409500 Sobic004G248300--Sobic005G100500 Sobic006G108500 Sobic006G108500 Sobic004G248300--Sobic006G108500 Sobic002G294300 Sobic002G294300 Sobic004G248300--Sobic002G294300 Sobic001G088400 Sobic001G088400 Sobic004G248300--Sobic001G088400 Sobic005G110562 Sobic005G110562 Sobic004G248300--Sobic005G110562 Sobic004G064700 Sobic004G064700 Sobic004G248300--Sobic004G064700 Sobic004G248300--Sobic003G298300 Sobic003G409500--Sobic001G395600 Sobic002G157050 Sobic002G157050 Sobic003G409500--Sobic002G157050 Sobic003G409500--Sobic005G100500 Sobic010G267300 Sobic010G267300 Sobic003G409500--Sobic010G267300 Sobic003G409500--Sobic006G108500 Sobic001G171700 Sobic001G171700 Sobic003G409500--Sobic001G171700 Sobic001G465600 Sobic001G465600 Sobic003G409500--Sobic001G465600 Sobic004G157050 Sobic004G157050 Sobic003G409500--Sobic004G157050 Sobic010G002301 Sobic010G002301 Sobic003G409500--Sobic010G002301 Sobic003G290200 Sobic003G290200 Sobic001G073400--Sobic003G290200 Sobic009G192200 Sobic009G192200 Sobic001G073400--Sobic009G192200 Sobic009G255000 Sobic009G255000 Sobic001G073400--Sobic009G255000 Sobic005G028500 Sobic005G028500 Sobic001G073400--Sobic005G028500 Sobic004G208301 Sobic004G208301 Sobic001G073400--Sobic004G208301 Sobic004G282933 Sobic004G282933 Sobic001G073400--Sobic004G282933 Sobic004G104200 Sobic004G104200 Sobic001G073400--Sobic004G104200 Sobic007G085900 Sobic007G085900 Sobic001G073400--Sobic007G085900 Sobic001G048500 Sobic001G048500 Sobic001G073400--Sobic001G048500 Sobic009G218700 Sobic009G218700 Sobic002G325200--Sobic009G218700 Sobic004G335300 Sobic004G335300 Sobic002G325200--Sobic004G335300 Sobic003G120900 Sobic003G120900 Sobic002G325200--Sobic003G120900 Sobic003G169700 Sobic003G169700 Sobic002G325200--Sobic003G169700 Sobic005G021400 Sobic005G021400 Sobic002G325200--Sobic005G021400 Sobic002G325200--Sobic001G395600 Sobic003G105200 Sobic003G105200 Sobic002G325200--Sobic003G105200 Sobic008G033800 Sobic008G033800 Sobic002G325200--Sobic008G033800 Sobic003G186066 Sobic003G186066 Sobic002G325200--Sobic003G186066 Sobic005G230800 Sobic005G230800 Sobic005G139600--Sobic005G230800 Sobic006G115532 Sobic006G115532 Sobic005G139600--Sobic006G115532 Sobic007G088600 Sobic007G088600 Sobic005G139600--Sobic007G088600 Sobic003G008200 Sobic003G008200 Sobic005G139600--Sobic003G008200 Sobic004G208201 Sobic004G208201 Sobic005G139600--Sobic004G208201 Sobic002G307700 Sobic002G307700 Sobic005G139600--Sobic002G307700 Sobic010G004800 Sobic010G004800 Sobic005G139600--Sobic010G004800 Sobic010G236950 Sobic010G236950 Sobic005G139600--Sobic010G236950 Sobic004G233100 Sobic004G233100 Sobic005G139600--Sobic004G233100 Sobic005G100500--Sobic006G108500 Sobic005G100500--Sobic003G409500 Sobic007G107800 Sobic007G107800 Sobic005G100500--Sobic007G107800 Sobic005G100500--Sobic010G267300 Sobic005G100500--Sobic001G395600 Sobic005G100500--Sobic009G218700 Sobic004G015600 Sobic004G015600 Sobic005G100500--Sobic004G015600 Sobic007G113566 Sobic007G113566 Sobic005G100500--Sobic007G113566 Sobic005G100500--Sobic004G157050 Sobic003G139600 Sobic003G139600 Sobic001G395600--Sobic003G139600 Sobic004G282966 Sobic004G282966 Sobic001G395600--Sobic004G282966 Sobic001G395600--Sobic001G465600 Sobic004G207800 Sobic004G207800 Sobic001G395600--Sobic004G207800 Sobic001G395600--Sobic010G002301 Sobic001G331650 Sobic001G331650 Sobic001G395600--Sobic001G331650 Sobic001G395600--Sobic007G113566 Sobic004G078200 Sobic004G078200 Sobic001G395600--Sobic004G078200 Sobic008G171200 Sobic008G171200 Sobic001G395600--Sobic008G171200 Sobic003G298300--Sobic005G100500 Sobic003G298300--Sobic007G107800 Sobic003G298300--Sobic009G218700 Sobic003G298300--Sobic001G022200 Sobic001G021601 Sobic001G021601 Sobic003G298300--Sobic001G021601 Sobic003G383200 Sobic003G383200 Sobic003G298300--Sobic003G383200 Sobic003G298300--Sobic002G325200 Sobic003G298300--Sobic004G248300 Sobic006G206600 Sobic006G206600 Sobic003G298300--Sobic006G206600 Sobic001G201933--Sobic010G002301 Sobic001G201933--Sobic003G139600 Sobic002G191900 Sobic002G191900 Sobic001G201933--Sobic002G191900 Sobic001G201933--Sobic007G113566 Sobic001G201933--Sobic001G465600 Sobic004G162100 Sobic004G162100 Sobic001G201933--Sobic004G162100 Sobic001G201933--Sobic004G078200 Sobic006G219400 Sobic006G219400 Sobic001G201933--Sobic006G219400 Sobic001G201933--Sobic004G157050
Octagon: transcription factors


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