Gene annotation
Transcriptome id Sobic.003G298300.1
Synonym Sb03g034830
Functional annotation expressed protein
UniProt A0A1B6Q636
Pfam PF07047
Panther DB PTHR12499 PTHR12499:SF2
NCBI CDD KOG3335; Predicted coiled-coil protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28510 : Optic atrophy 3 protein (OPA3)
RAP-DB (Rice) LOC_Os01g54950.1 : expressed protein
MaizeGDB (Corn) Zm00025a040035
Brachypodium KQK09766
Barley HORVU3Hr1G072310.1
Wheat TraesCS3D02G291800 , TraesCS3A02G292100 , TraesCS3B02G326700
Populus -


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cDNA sequences
Sobic.003G298300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G100500 RNA polymerase subunit, putative, expressed K03020: RPC19, DNA-directed RNA polymerases I and III subunit RPAC2
2 Sobic.007G107800 expressed protein -
3 Sobic.009G218700 pentatricopeptide, putative, expressed -
4 Sobic.001G022200 harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.001G021601 - -
6 Sobic.003G383200 expressed protein -
7 Sobic.002G325200 harpin-induced protein 1 domain containing protein, expressed -
8 Sobic.004G248300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
9 Sobic.006G206600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine phosphatase, putative, expressed -
10 Sobic.009G128400 peptide-N4-asparagine amidase A, putative, expressed -
11 Sobic.001G073400 expressed protein -
12 Sobic.002G198900 PPR repeat domain containing protein, putative, expressed -
13 Sobic.003G409500 - -
14 Sobic.003G337400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
15 Sobic.009G239101 - -
16 Sobic.004G312000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
17 Sobic.001G141200 ADP-ribosylation factor, putative, expressed K07943: ADP-ribosylation factor-like protein 2
18 Sobic.002G412300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.001G110500 expressed protein -
20 Sobic.002G220400 - -


Gene co-expression network
sample Sobic003G298300 Sobic003G298300 Sobic005G100500 Sobic005G100500 Sobic003G298300--Sobic005G100500 Sobic007G107800 Sobic007G107800 Sobic003G298300--Sobic007G107800 Sobic009G218700 Sobic009G218700 Sobic003G298300--Sobic009G218700 Sobic001G022200 Sobic001G022200 Sobic003G298300--Sobic001G022200 Sobic001G021601 Sobic001G021601 Sobic003G298300--Sobic001G021601 Sobic003G383200 Sobic003G383200 Sobic003G298300--Sobic003G383200 Sobic002G325200 Sobic002G325200 Sobic003G298300--Sobic002G325200 Sobic004G248300 Sobic004G248300 Sobic003G298300--Sobic004G248300 Sobic006G206600 Sobic006G206600 Sobic003G298300--Sobic006G206600 Sobic006G108500 Sobic006G108500 Sobic005G100500--Sobic006G108500 Sobic003G409500 Sobic003G409500 Sobic005G100500--Sobic003G409500 Sobic005G100500--Sobic007G107800 Sobic010G267300 Sobic010G267300 Sobic005G100500--Sobic010G267300 Sobic001G395600 Sobic001G395600 Sobic005G100500--Sobic001G395600 Sobic005G100500--Sobic009G218700 Sobic004G015600 Sobic004G015600 Sobic005G100500--Sobic004G015600 Sobic007G113566 Sobic007G113566 Sobic005G100500--Sobic007G113566 Sobic004G157050 Sobic004G157050 Sobic005G100500--Sobic004G157050 Sobic007G107800--Sobic004G157050 Sobic004G207800 Sobic004G207800 Sobic007G107800--Sobic004G207800 Sobic009G192200 Sobic009G192200 Sobic007G107800--Sobic009G192200 Sobic007G107800--Sobic007G113566 Sobic003G290200 Sobic003G290200 Sobic007G107800--Sobic003G290200 Sobic010G002301 Sobic010G002301 Sobic007G107800--Sobic010G002301 Sobic001G332933 Sobic001G332933 Sobic007G107800--Sobic001G332933 Sobic008G171200 Sobic008G171200 Sobic007G107800--Sobic008G171200 Sobic007G085900 Sobic007G085900 Sobic007G107800--Sobic007G085900 Sobic009G218700--Sobic006G206600 Sobic003G169700 Sobic003G169700 Sobic009G218700--Sobic003G169700 Sobic002G220400 Sobic002G220400 Sobic009G218700--Sobic002G220400 Sobic006G100150 Sobic006G100150 Sobic009G218700--Sobic006G100150 Sobic004G303900 Sobic004G303900 Sobic009G218700--Sobic004G303900 Sobic009G260550 Sobic009G260550 Sobic009G218700--Sobic009G260550 Sobic002G198900 Sobic002G198900 Sobic009G218700--Sobic002G198900 Sobic007G028300 Sobic007G028300 Sobic009G218700--Sobic007G028300 Sobic003G169800 Sobic003G169800 Sobic009G218700--Sobic003G169800 Sobic001G022200--Sobic004G248300 Sobic001G022200--Sobic003G409500 Sobic001G073400 Sobic001G073400 Sobic001G022200--Sobic001G073400 Sobic001G022200--Sobic002G325200 Sobic005G139600 Sobic005G139600 Sobic001G022200--Sobic005G139600 Sobic001G022200--Sobic005G100500 Sobic001G022200--Sobic001G395600 Sobic001G022200--Sobic003G298300 Sobic001G201933 Sobic001G201933 Sobic001G022200--Sobic001G201933 Sobic006G261650 Sobic006G261650 Sobic001G021601--Sobic006G261650 Sobic001G021601--Sobic003G169700 Sobic005G154600 Sobic005G154600 Sobic001G021601--Sobic005G154600 Sobic001G397550 Sobic001G397550 Sobic001G021601--Sobic001G397550 Sobic002G033550 Sobic002G033550 Sobic001G021601--Sobic002G033550 Sobic002G337400 Sobic002G337400 Sobic001G021601--Sobic002G337400 Sobic003G143600 Sobic003G143600 Sobic001G021601--Sobic003G143600 Sobic004G199100 Sobic004G199100 Sobic001G021601--Sobic004G199100 Sobic004G061100 Sobic004G061100 Sobic001G021601--Sobic004G061100 Sobic005G057201 Sobic005G057201 Sobic003G383200--Sobic005G057201 Sobic001G059150 Sobic001G059150 Sobic003G383200--Sobic001G059150 Sobic003G200400 Sobic003G200400 Sobic003G383200--Sobic003G200400 Sobic003G159300 Sobic003G159300 Sobic003G383200--Sobic003G159300 Sobic006G145650 Sobic006G145650 Sobic003G383200--Sobic006G145650 Sobic004G013900 Sobic004G013900 Sobic003G383200--Sobic004G013900 Sobic001G234733 Sobic001G234733 Sobic003G383200--Sobic001G234733 Sobic005G008400 Sobic005G008400 Sobic003G383200--Sobic005G008400 Sobic010G214950 Sobic010G214950 Sobic003G383200--Sobic010G214950 Sobic002G325200--Sobic009G218700 Sobic004G335300 Sobic004G335300 Sobic002G325200--Sobic004G335300 Sobic003G120900 Sobic003G120900 Sobic002G325200--Sobic003G120900 Sobic002G325200--Sobic003G169700 Sobic005G021400 Sobic005G021400 Sobic002G325200--Sobic005G021400 Sobic002G325200--Sobic001G395600 Sobic003G105200 Sobic003G105200 Sobic002G325200--Sobic003G105200 Sobic008G033800 Sobic008G033800 Sobic002G325200--Sobic008G033800 Sobic003G186066 Sobic003G186066 Sobic002G325200--Sobic003G186066 Sobic004G248300--Sobic001G022200 Sobic004G248300--Sobic003G409500 Sobic004G248300--Sobic005G100500 Sobic004G248300--Sobic006G108500 Sobic002G294300 Sobic002G294300 Sobic004G248300--Sobic002G294300 Sobic001G088400 Sobic001G088400 Sobic004G248300--Sobic001G088400 Sobic005G110562 Sobic005G110562 Sobic004G248300--Sobic005G110562 Sobic004G064700 Sobic004G064700 Sobic004G248300--Sobic004G064700 Sobic004G248300--Sobic003G298300 Sobic006G206600--Sobic007G028300 Sobic006G206600--Sobic006G100150 Sobic004G078200 Sobic004G078200 Sobic006G206600--Sobic004G078200 Sobic006G206600--Sobic004G303900 Sobic006G206600--Sobic009G218700 Sobic006G135701 Sobic006G135701 Sobic006G206600--Sobic006G135701 Sobic001G118050 Sobic001G118050 Sobic006G206600--Sobic001G118050 Sobic002G088300 Sobic002G088300 Sobic006G206600--Sobic002G088300 Sobic006G206600--Sobic007G113566
Octagon: transcription factors


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