Gene annotation
Transcriptome id Sobic.009G239101.1
Synonym -
Functional annotation -
UniProt A0A1Z5R4T4
Pfam PF04434 PF03101 PF10551
Panther DB PTHR31669 PTHR31669:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os01g19050.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G412300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
2 Sobic.005G100500 RNA polymerase subunit, putative, expressed K03020: RPC19, DNA-directed RNA polymerases I and III subunit RPAC2
3 Sobic.002G198900 PPR repeat domain containing protein, putative, expressed -
4 Sobic.010G064800 histidine kinase, putative, expressed -
5 Sobic.001G444200 pentatricopeptide, putative, expressed -
6 Sobic.006G206600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine phosphatase, putative, expressed -
7 Sobic.001G021601 - -
8 Sobic.002G367000 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
9 Sobic.002G314100 dimethyladenosine transferase, putative, expressed K14191: 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
10 Sobic.009G218700 pentatricopeptide, putative, expressed -
11 Sobic.003G032301 - -
12 Sobic.002G187200 expressed protein -
13 Sobic.002G337400 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
14 Sobic.001G175200 expressed protein -
15 Sobic.006G059150 - -
16 Sobic.003G031600 expressed protein -
17 Sobic.K004201 - -
18 Sobic.001G491500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.005G198150 - -
20 Sobic.002G088300 expressed protein -


Gene co-expression network
sample Sobic009G239101 Sobic009G239101 Sobic002G412300 Sobic002G412300 Sobic009G239101--Sobic002G412300 Sobic005G100500 Sobic005G100500 Sobic009G239101--Sobic005G100500 Sobic002G198900 Sobic002G198900 Sobic009G239101--Sobic002G198900 Sobic010G064800 Sobic010G064800 Sobic009G239101--Sobic010G064800 Sobic001G444200 Sobic001G444200 Sobic009G239101--Sobic001G444200 Sobic006G206600 Sobic006G206600 Sobic009G239101--Sobic006G206600 Sobic001G021601 Sobic001G021601 Sobic009G239101--Sobic001G021601 Sobic002G367000 Sobic002G367000 Sobic009G239101--Sobic002G367000 Sobic002G314100 Sobic002G314100 Sobic009G239101--Sobic002G314100 Sobic002G412300--Sobic002G198900 Sobic004G061100 Sobic004G061100 Sobic002G412300--Sobic004G061100 Sobic001G175200 Sobic001G175200 Sobic002G412300--Sobic001G175200 Sobic001G509901 Sobic001G509901 Sobic002G412300--Sobic001G509901 Sobic003G143600 Sobic003G143600 Sobic002G412300--Sobic003G143600 Sobic003G030100 Sobic003G030100 Sobic002G412300--Sobic003G030100 Sobic005G166200 Sobic005G166200 Sobic002G412300--Sobic005G166200 Sobic008G123700 Sobic008G123700 Sobic002G412300--Sobic008G123700 Sobic004G079400 Sobic004G079400 Sobic002G412300--Sobic004G079400 Sobic006G108500 Sobic006G108500 Sobic005G100500--Sobic006G108500 Sobic003G409500 Sobic003G409500 Sobic005G100500--Sobic003G409500 Sobic007G107800 Sobic007G107800 Sobic005G100500--Sobic007G107800 Sobic010G267300 Sobic010G267300 Sobic005G100500--Sobic010G267300 Sobic001G395600 Sobic001G395600 Sobic005G100500--Sobic001G395600 Sobic009G218700 Sobic009G218700 Sobic005G100500--Sobic009G218700 Sobic004G015600 Sobic004G015600 Sobic005G100500--Sobic004G015600 Sobic007G113566 Sobic007G113566 Sobic005G100500--Sobic007G113566 Sobic004G157050 Sobic004G157050 Sobic005G100500--Sobic004G157050 Sobic002G198900--Sobic009G218700 Sobic002G198900--Sobic003G143600 Sobic002G198900--Sobic002G412300 Sobic004G199100 Sobic004G199100 Sobic002G198900--Sobic004G199100 Sobic007G028300 Sobic007G028300 Sobic002G198900--Sobic007G028300 Sobic002G198900--Sobic006G206600 Sobic002G198900--Sobic005G166200 Sobic002G088300 Sobic002G088300 Sobic002G198900--Sobic002G088300 Sobic001G397550 Sobic001G397550 Sobic002G198900--Sobic001G397550 Sobic010G059400 Sobic010G059400 Sobic010G064800--Sobic010G059400 Sobic007G046800 Sobic007G046800 Sobic010G064800--Sobic007G046800 Sobic006G033601 Sobic006G033601 Sobic010G064800--Sobic006G033601 Sobic010G237500 Sobic010G237500 Sobic010G064800--Sobic010G237500 Sobic006G087800 Sobic006G087800 Sobic010G064800--Sobic006G087800 Sobic010G064800--Sobic002G314100 Sobic003G388201 Sobic003G388201 Sobic010G064800--Sobic003G388201 SobicK004201 SobicK004201 Sobic010G064800--SobicK004201 Sobic004G143550 Sobic004G143550 Sobic010G064800--Sobic004G143550 Sobic007G160050 Sobic007G160050 Sobic001G444200--Sobic007G160050 Sobic003G384750 Sobic003G384750 Sobic001G444200--Sobic003G384750 Sobic004G208800 Sobic004G208800 Sobic001G444200--Sobic004G208800 Sobic001G159500 Sobic001G159500 Sobic001G444200--Sobic001G159500 Sobic001G201933 Sobic001G201933 Sobic001G444200--Sobic001G201933 Sobic003G047400 Sobic003G047400 Sobic001G444200--Sobic003G047400 Sobic004G145550 Sobic004G145550 Sobic001G444200--Sobic004G145550 Sobic001G444200--Sobic001G395600 Sobic003G139600 Sobic003G139600 Sobic001G444200--Sobic003G139600 Sobic006G206600--Sobic007G028300 Sobic006G100150 Sobic006G100150 Sobic006G206600--Sobic006G100150 Sobic004G078200 Sobic004G078200 Sobic006G206600--Sobic004G078200 Sobic004G303900 Sobic004G303900 Sobic006G206600--Sobic004G303900 Sobic006G206600--Sobic009G218700 Sobic006G135701 Sobic006G135701 Sobic006G206600--Sobic006G135701 Sobic001G118050 Sobic001G118050 Sobic006G206600--Sobic001G118050 Sobic006G206600--Sobic002G088300 Sobic006G206600--Sobic007G113566 Sobic006G261650 Sobic006G261650 Sobic001G021601--Sobic006G261650 Sobic003G169700 Sobic003G169700 Sobic001G021601--Sobic003G169700 Sobic005G154600 Sobic005G154600 Sobic001G021601--Sobic005G154600 Sobic001G021601--Sobic001G397550 Sobic002G033550 Sobic002G033550 Sobic001G021601--Sobic002G033550 Sobic002G337400 Sobic002G337400 Sobic001G021601--Sobic002G337400 Sobic001G021601--Sobic003G143600 Sobic001G021601--Sobic004G199100 Sobic001G021601--Sobic004G061100 Sobic003G257650 Sobic003G257650 Sobic002G367000--Sobic003G257650 Sobic006G038050 Sobic006G038050 Sobic002G367000--Sobic006G038050 Sobic003G198850 Sobic003G198850 Sobic002G367000--Sobic003G198850 Sobic007G190600 Sobic007G190600 Sobic002G367000--Sobic007G190600 Sobic003G383000 Sobic003G383000 Sobic002G367000--Sobic003G383000 Sobic002G149500 Sobic002G149500 Sobic002G367000--Sobic002G149500 Sobic002G367000--Sobic001G175200 Sobic002G246100 Sobic002G246100 Sobic002G367000--Sobic002G246100 Sobic002G367000--SobicK004201 Sobic004G193100 Sobic004G193100 Sobic002G314100--Sobic004G193100 Sobic002G314100--Sobic003G388201 Sobic006G192150 Sobic006G192150 Sobic002G314100--Sobic006G192150 Sobic002G314100--SobicK004201 Sobic002G419550 Sobic002G419550 Sobic002G314100--Sobic002G419550 Sobic001G202800 Sobic001G202800 Sobic002G314100--Sobic001G202800 Sobic010G276850 Sobic010G276850 Sobic002G314100--Sobic010G276850 Sobic010G091250 Sobic010G091250 Sobic002G314100--Sobic010G091250 Sobic002G025200 Sobic002G025200 Sobic002G314100--Sobic002G025200
Octagon: transcription factors


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