Gene annotation
Transcriptome id Sobic.001G110500.1
Synonym Sb01g009850
Functional annotation expressed protein
UniProt A0A1B6QIE9
Pfam PF06101
Panther DB PTHR17204 PTHR17204:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18490 : Plant protein of unknown function (DUF946)
RAP-DB (Rice) LOC_Os03g51150.1 : expressed protein
MaizeGDB (Corn) Zm00025a016929
Brachypodium KQK13488
Barley HORVU4Hr1G008740.6 , HORVU4Hr1G008740.1
Wheat TraesCS4B02G052600 , TraesCS4A02G262200 , TraesCS4D02G052800
Populus -


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cDNA sequences
Sobic.001G110500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G244200 OsFBDUF42 - F-box and DUF domain containing protein, expressed -
2 Sobic.002G408400 beta-amylase, putative, expressed -
3 Sobic.003G384750 - -
4 Sobic.008G104900 - -
5 Sobic.003G290200 expressed protein -
6 Sobic.003G370800 aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
7 Sobic.004G145550 - -
8 Sobic.007G107800 expressed protein -
9 Sobic.009G143600 clathrin assembly protein, putative, expressed -
10 Sobic.006G275900 pentatricopeptide, putative, expressed -
11 Sobic.001G332933 - -
12 Sobic.007G009900 - -
13 Sobic.008G123000 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
14 Sobic.002G375200 expressed protein -
15 Sobic.006G183500 methyltransferase, putative, expressed -
16 Sobic.010G103400 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
17 Sobic.007G070100 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
18 Sobic.006G231900 SPRY-domain containing protein, putative, expressed K15047: HNRNPUL1, heterogeneous nuclear ribonucleoprotein U-like protein 1
19 Sobic.008G057200 amino acid transporter, putative, expressed -
20 Sobic.009G212900 myosin head family protein, expressed K10357: myosin V


Gene co-expression network
sample Sobic001G110500 Sobic001G110500 Sobic006G244200 Sobic006G244200 Sobic001G110500--Sobic006G244200 Sobic002G408400 Sobic002G408400 Sobic001G110500--Sobic002G408400 Sobic003G384750 Sobic003G384750 Sobic001G110500--Sobic003G384750 Sobic008G104900 Sobic008G104900 Sobic001G110500--Sobic008G104900 Sobic003G290200 Sobic003G290200 Sobic001G110500--Sobic003G290200 Sobic003G370800 Sobic003G370800 Sobic001G110500--Sobic003G370800 Sobic004G145550 Sobic004G145550 Sobic001G110500--Sobic004G145550 Sobic007G107800 Sobic007G107800 Sobic001G110500--Sobic007G107800 Sobic009G143600 Sobic009G143600 Sobic001G110500--Sobic009G143600 Sobic006G244200--Sobic004G145550 Sobic006G244200--Sobic009G143600 Sobic006G244200--Sobic003G384750 Sobic001G520600 Sobic001G520600 Sobic006G244200--Sobic001G520600 Sobic010G093200 Sobic010G093200 Sobic006G244200--Sobic010G093200 Sobic002G375200 Sobic002G375200 Sobic006G244200--Sobic002G375200 Sobic007G113101 Sobic007G113101 Sobic006G244200--Sobic007G113101 Sobic006G252800 Sobic006G252800 Sobic006G244200--Sobic006G252800 Sobic006G244200--Sobic002G408400 Sobic002G408400--Sobic008G104900 Sobic002G408400--Sobic003G370800 Sobic008G057200 Sobic008G057200 Sobic002G408400--Sobic008G057200 Sobic007G009900 Sobic007G009900 Sobic002G408400--Sobic007G009900 Sobic010G103400 Sobic010G103400 Sobic002G408400--Sobic010G103400 Sobic002G408400--Sobic003G384750 Sobic002G408400--Sobic009G143600 Sobic009G212900 Sobic009G212900 Sobic002G408400--Sobic009G212900 Sobic002G408400--Sobic006G244200 Sobic009G174800 Sobic009G174800 Sobic003G384750--Sobic009G174800 Sobic003G384750--Sobic002G408400 Sobic003G384750--Sobic004G145550 Sobic003G384750--Sobic006G244200 Sobic007G160050 Sobic007G160050 Sobic003G384750--Sobic007G160050 Sobic003G384750--Sobic008G057200 Sobic003G384750--Sobic003G370800 Sobic003G384750--Sobic009G143600 Sobic001G159500 Sobic001G159500 Sobic003G384750--Sobic001G159500 Sobic008G104900--Sobic002G408400 Sobic008G104900--Sobic010G103400 Sobic008G104900--Sobic003G370800 Sobic008G104900--Sobic007G009900 Sobic008G104900--Sobic008G057200 Sobic005G077600 Sobic005G077600 Sobic008G104900--Sobic005G077600 Sobic007G019700 Sobic007G019700 Sobic008G104900--Sobic007G019700 Sobic003G394000 Sobic003G394000 Sobic008G104900--Sobic003G394000 Sobic001G336450 Sobic001G336450 Sobic008G104900--Sobic001G336450 Sobic001G331650 Sobic001G331650 Sobic003G290200--Sobic001G331650 Sobic001G465600 Sobic001G465600 Sobic003G290200--Sobic001G465600 Sobic006G219400 Sobic006G219400 Sobic003G290200--Sobic006G219400 Sobic003G401300 Sobic003G401300 Sobic003G290200--Sobic003G401300 Sobic004G207800 Sobic004G207800 Sobic003G290200--Sobic004G207800 Sobic003G233266 Sobic003G233266 Sobic003G290200--Sobic003G233266 Sobic001G048500 Sobic001G048500 Sobic003G290200--Sobic001G048500 Sobic009G192200 Sobic009G192200 Sobic003G290200--Sobic009G192200 Sobic003G290200--Sobic007G107800 Sobic003G370800--Sobic002G408400 Sobic003G370800--Sobic008G104900 Sobic003G370800--Sobic009G212900 Sobic003G370800--Sobic009G143600 Sobic003G370800--Sobic007G009900 Sobic004G200100 Sobic004G200100 Sobic003G370800--Sobic004G200100 Sobic003G370800--Sobic003G394000 Sobic003G370800--Sobic003G384750 Sobic001G486800 Sobic001G486800 Sobic003G370800--Sobic001G486800 Sobic004G145550--Sobic006G244200 Sobic004G145550--Sobic001G520600 Sobic004G145550--Sobic010G093200 Sobic004G145550--Sobic003G384750 Sobic004G145550--Sobic002G375200 Sobic008G014400 Sobic008G014400 Sobic004G145550--Sobic008G014400 Sobic001G123400 Sobic001G123400 Sobic004G145550--Sobic001G123400 Sobic004G145550--Sobic009G143600 Sobic004G334601 Sobic004G334601 Sobic004G145550--Sobic004G334601 Sobic004G157050 Sobic004G157050 Sobic007G107800--Sobic004G157050 Sobic007G107800--Sobic004G207800 Sobic007G107800--Sobic009G192200 Sobic007G113566 Sobic007G113566 Sobic007G107800--Sobic007G113566 Sobic007G107800--Sobic003G290200 Sobic010G002301 Sobic010G002301 Sobic007G107800--Sobic010G002301 Sobic001G332933 Sobic001G332933 Sobic007G107800--Sobic001G332933 Sobic008G171200 Sobic008G171200 Sobic007G107800--Sobic008G171200 Sobic007G085900 Sobic007G085900 Sobic007G107800--Sobic007G085900 Sobic009G143600--Sobic006G244200 Sobic009G143600--Sobic003G370800 Sobic009G143600--Sobic009G212900 Sobic009G143600--Sobic002G408400 Sobic009G143600--Sobic004G145550 Sobic009G143600--Sobic003G384750 Sobic009G143600--Sobic007G009900 Sobic003G106800 Sobic003G106800 Sobic009G143600--Sobic003G106800 Sobic009G143600--Sobic001G123400
Octagon: transcription factors


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